RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 PEAK1Q9H792 1746 aa10.48□□□□□ -0.73
SIX4-202ENST00000554079 SPATA31D1Q6ZQQ2 1576 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 MACROD2A1Z1Q3 448 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 SPATA31D3P0C874 917 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 TPBGLP0DKB5 382 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 MYBP10242 640 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 ECHS1P30084 290 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 GBP1P32455 592 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 NLRP5P59047 1200 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 MAGOHP61326 146 aaKnown RBP10.47□□□□□ -0.73
SIX4-202ENST00000554079 LSAMPQ13449 338 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 WASHC4Q2M389 1173 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 CNPY1Q3B7I2 92 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 SPATA31D4Q6ZUB0 917 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 CCDC80Q76M96 950 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 LRRC34Q8IZ02 419 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 ASAP3Q8TDY4 903 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 MAGOHBQ96A72 148 aaKnown RBP10.47□□□□□ -0.73
SIX4-202ENST00000554079 EAF2Q96CJ1 260 aaPredicted RBP10.47□□□□□ -0.73
SIX4-202ENST00000554079 PBKQ96KB5 322 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 HAPLN3Q96S86 360 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 KRT23Q9C075 422 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 BOLA2Q9H3K6 86 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 PCDH18Q9HCL0 1135 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 TLR7Q9NYK1 1049 aaKnown RBP10.47□□□□□ -0.73
SIX4-202ENST00000554079 LNPEPQ9UIQ6 1025 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 STK38LQ9Y2H1 464 aa10.47□□□□□ -0.73
SIX4-202ENST00000554079 PPP1R3GB7ZBB8 358 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 CTNND1O60716 968 aaKnown RBP10.46□□□□□ -0.73
SIX4-202ENST00000554079 FUT4P22083 530 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 DPYDQ12882 1025 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 TRADDQ15628 312 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 PKN1Q16512 942 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 TSNAXIP1Q2TAA8 658 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 KLHL10Q6JEL2 608 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 NCCRP1Q6ZVX7 275 aaPredicted RBP10.46□□□□□ -0.73
SIX4-202ENST00000554079 LONP2Q86WA8 852 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 SLF2Q8IX21 1173 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.46□□□□□ -0.73
SIX4-202ENST00000554079 FBXL16Q8N461 479 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 ENDOVQ8N8Q3 282 aaKnown RBP10.46□□□□□ -0.73
SIX4-202ENST00000554079 MDM1Q8TC05 714 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 STK32AQ8WU08 396 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.46□□□□□ -0.73
SIX4-202ENST00000554079 FAM81BQ96LP2 452 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 NLRP3Q96P20 1036 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 VPS16Q9H269 839 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 TAB2Q9NYJ8 693 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 HSFX1Q9UBD0 423 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 SCOCQ9UIL1 159 aa10.46□□□□□ -0.73
SIX4-202ENST00000554079 SIGLEC16A6NMB1 481 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 POLR2DO15514 142 aaKnown RBP10.46□□□□□ -0.74
SIX4-202ENST00000554079 GNA14O95837 355 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 YY1P25490 414 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 CYLC1P35663 651 aaPredicted RBP10.46□□□□□ -0.74
SIX4-202ENST00000554079 PAFAH1B1P43034 410 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 SERPINB4P48594 390 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 LMNB2Q03252 620 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 SULT2A1Q06520 285 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 MCL1Q07820 350 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 PRPF4BQ13523 1007 aaKnown RBP10.46□□□□□ -0.74
SIX4-202ENST00000554079 TTF1Q15361 905 aaPredicted RBP10.46□□□□□ -0.74
SIX4-202ENST00000554079 CCDC92Q53HC0 331 aaPredicted RBP10.46□□□□□ -0.74
SIX4-202ENST00000554079 ODF2Q5BJF6 829 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 VPS37DQ86XT2 251 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 SLC15A3Q8IY34 581 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 EIF1ADQ8N9N8 165 aaKnown RBP10.46□□□□□ -0.74
SIX4-202ENST00000554079 ATP8B4Q8TF62 1192 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 DNAJC9Q8WXX5 260 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 UTP4Q969X6 686 aaKnown RBP10.46□□□□□ -0.74
SIX4-202ENST00000554079 PPP1R14BQ96C90 147 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 IFT74Q96LB3 600 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 ELAC2Q9BQ52 826 aaKnown RBP10.46□□□□□ -0.74
SIX4-202ENST00000554079 CCDC134Q9H6E4 229 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 SH2D4AQ9H788 454 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 CYP39A1Q9NYL5 469 aa10.46□□□□□ -0.74
SIX4-202ENST00000554079 BARX2Q9UMQ3 279 aaPredicted RBP10.46□□□□□ -0.74
SIX4-202ENST00000554079 PA2G4Q9UQ80 394 aaKnown RBP10.46□□□□□ -0.74
SIX4-202ENST00000554079 CHD4Q14839 1912 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 TMEM131LA2VDJ0 1609 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 BHMG1C9JSJ3 638 aaPredicted RBP10.45□□□□□ -0.74
SIX4-202ENST00000554079 TACC1O75410 805 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 CAPN15O75808 1086 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 SHBGP04278 402 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 CYP1A1P04798 512 aaPredicted RBP10.45□□□□□ -0.74
SIX4-202ENST00000554079 ALOX15P16050 662 aaPredicted RBP10.45□□□□□ -0.74
SIX4-202ENST00000554079 RXRBP28702 533 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 CXCR5P32302 372 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 EPHA10Q5JZY3 1008 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 SULT6B1Q6IMI4 303 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 PI16Q6UXB8 463 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 STK11IPQ8N1F8 1099 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 ARHGAP18Q8N392 663 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 SDR16C5Q8N3Y7 309 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 KRI1Q8N9T8 703 aaKnown RBP10.45□□□□□ -0.74
SIX4-202ENST00000554079 DYDC1Q8WWB3 177 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 EDC3Q96F86 508 aaKnown RBP10.45□□□□□ -0.74
SIX4-202ENST00000554079 LTV1Q96GA3 475 aaPredicted RBP10.45□□□□□ -0.74
SIX4-202ENST00000554079 ZNF333Q96JL9 665 aa10.45□□□□□ -0.74
SIX4-202ENST00000554079 CCDC8Q9H0W5 538 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms