RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 HIPK4Q8NE63 616 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 SCG3Q8WXD2 468 aaKnown RBP9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 GLMNQ92990 594 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 CCDC42Q96M95 316 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 SNX25Q9H3E2 840 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 ZNF229Q9UJW7 825 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 TMCO1Q9UM00 188 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 KDRP35968 1356 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 A1BGP04217 495 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 PIP4K2AP48426 406 aaPredicted RBP9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 BPIFB4P59827 614 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 STK4Q13043 487 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 OTUD6AQ7L8S5 288 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 MYCBPAPQ8TBZ2 947 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 NLRP4Q96MN2 994 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 CRNKL1Q9BZJ0 848 aaKnown RBP9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 AS3MTQ9HBK9 375 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 MAGEA13PA6NCF6 341 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 ATP1A3P13637 1013 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 INHBEP58166 350 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 LAMC2Q13753 1193 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 TTC39AQ5SRH9 613 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 DNAJC1Q96KC8 554 aaKnown RBP9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 CCDC77Q9BR77 488 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 TAB2Q9NYJ8 693 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 TUBGCP4Q9UGJ1 667 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 TMEM98Q9Y2Y6 226 aa9.77□□□□□ -0.85
GTF2A1-203ENST00000553612 FAM83GA6ND36 823 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 CCDC153Q494R4 210 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 GALNT4Q8N4A0 578 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 FERMT1Q9BQL6 677 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 HPS4Q9NQG7 708 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 RBM8AQ9Y5S9 174 aaKnown RBP9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 ARPP19P56211 112 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 KRT76Q01546 638 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 ASCC2Q9H1I8 757 aaPredicted RBP9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 EPB41L5Q9HCM4 733 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 ETNK2Q9NVF9 386 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 NFU1Q9UMS0 254 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 PDE6AP16499 860 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 CYLC1P35663 651 aaPredicted RBP9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 DPCR1Q3MIW9 517 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 MCM10Q7L590 875 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 NELFBQ8WX92 580 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 CCDC85AQ96PX6 553 aaPredicted RBP9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 CCDC28BQ9BUN5 200 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 PLEKHA5Q9HAU0 1116 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 WDR35Q9P2L0 1181 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 TRAF3IP3Q9Y228 551 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 SPTLC2O15270 562 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 MXI1P50539 228 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 ADAM17P78536 824 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 SULT1C3Q6IMI6 304 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 CCDC62Q6P9F0 684 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 TAS2R42Q7RTR8 314 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 FAM186BQ8IYM0 893 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 U2AF1L4Q8WU68 220 aaKnown RBP9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 SMYD3Q9H7B4 428 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 EPHB4P54760 987 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 C21orf62-AS1Q17RA5 79 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 WLSQ5T9L3 541 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 JDP2Q8WYK2 163 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 METTL5Q9NRN9 209 aaKnown RBP9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 GID8Q9NWU2 228 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 TMED5Q9Y3A6 229 aa9.76□□□□□ -0.85
GTF2A1-203ENST00000553612 RGS16O15492 202 aaPredicted RBP9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 LINGO3P0C6S8 592 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 GRAMD1BQ3KR37 738 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 CATSPER3Q86XQ3 398 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 ARHGAP45Q92619 1136 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 MAELQ96JY0 434 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 ZNF304Q9HCX3 659 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 ATAD3AQ9NVI7 634 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 NKIRAS1Q9NYS0 192 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 PDP2Q9P2J9 529 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 MTRF1LQ9UGC7 380 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 ATPIF1Q9UII2 106 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 STMN1P16949 149 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 ENDOUP21128 410 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 PCSK7Q16549 785 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 MTHFD1LQ6UB35 978 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 MARCH10Q8NA82 808 aaPredicted RBP9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 DEPTORQ8TB45 409 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 ARL8AQ96BM9 186 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 WDR6Q9NNW5 1121 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 CLIC5Q9NZA1 410 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 ESYT3A0FGR9 886 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 ANKRD33BA6NCL7 494 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 TMCC2O75069 709 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 NQO1P15559 274 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 STX2P32856 288 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 R3HDM1Q15032 1099 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 SMU1Q2TAY7 513 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 PCMTD2Q9NV79 361 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 GOLGA8OA6NCC3 632 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 GOLGA8NF8WBI6 632 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 H0YC42 278 aa9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 WBP4O75554 376 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 TKTP29401 623 aaKnown RBP9.75□□□□□ -0.85
GTF2A1-203ENST00000553612 COBLL1Q53SF7 1204 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms