RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 CYP2C9P11712 490 aa18.39■□□□□ 0.53
CDK4-215ENST00000553237 SMAD3P84022 425 aaKnown RBP18.39■□□□□ 0.53
CDK4-215ENST00000553237 ZNF697Q5TEC3 545 aa18.39■□□□□ 0.53
CDK4-215ENST00000553237 ZNF365Q70YC5 407 aa18.39■□□□□ 0.53
CDK4-215ENST00000553237 CMTR1Q8N1G2 835 aaKnown RBP18.39■□□□□ 0.53
CDK4-215ENST00000553237 SAMD3Q8N6K7 520 aa18.39■□□□□ 0.53
CDK4-215ENST00000553237 IL31RAQ8NI17 732 aa18.39■□□□□ 0.53
CDK4-215ENST00000553237 NOC4LQ9BVI4 516 aaKnown RBP18.39■□□□□ 0.53
CDK4-215ENST00000553237 SORBS3O60504 671 aa18.38■□□□□ 0.53
CDK4-215ENST00000553237 CDC45O75419 566 aa18.38■□□□□ 0.53
CDK4-215ENST00000553237 MMP3P08254 477 aa18.38■□□□□ 0.53
CDK4-215ENST00000553237 GNAQP50148 359 aa18.38■□□□□ 0.53
CDK4-215ENST00000553237 PGM5Q15124 567 aa18.38■□□□□ 0.53
CDK4-215ENST00000553237 RNF20Q5VTR2 975 aa18.38■□□□□ 0.53
CDK4-215ENST00000553237 VSIG10LQ86VR7 867 aa18.38■□□□□ 0.53
CDK4-215ENST00000553237 SRBD1Q8N5C6 995 aaKnown RBP18.38■□□□□ 0.53
CDK4-215ENST00000553237 RRP36Q96EU6 259 aaKnown RBP18.38■□□□□ 0.53
CDK4-215ENST00000553237 SPZ1Q9BXG8 430 aa18.38■□□□□ 0.53
CDK4-215ENST00000553237 RGS20O76081 388 aa18.37■□□□□ 0.53
CDK4-215ENST00000553237 SUPT20HL2P0C7V6 817 aa18.37■□□□□ 0.53
CDK4-215ENST00000553237 LIFRP42702 1097 aa18.37■□□□□ 0.53
CDK4-215ENST00000553237 CCDC82Q8N4S0 544 aa18.37■□□□□ 0.53
CDK4-215ENST00000553237 SCLYQ96I15 445 aa18.37■□□□□ 0.53
CDK4-215ENST00000553237 GUCD1Q96NT3 240 aa18.37■□□□□ 0.53
CDK4-215ENST00000553237 LZTS2Q9BRK4 669 aa18.37■□□□□ 0.53
CDK4-215ENST00000553237 WNT8AQ9H1J5 351 aa18.37■□□□□ 0.53
CDK4-215ENST00000553237 SEMA6BQ9H3T3 888 aa18.37■□□□□ 0.53
CDK4-215ENST00000553237 IL23AQ9NPF7 189 aa18.37■□□□□ 0.53
CDK4-215ENST00000553237 SEC63Q9UGP8 760 aaKnown RBP18.37■□□□□ 0.53
CDK4-215ENST00000553237 STXBP5LQ9Y2K9 1186 aa18.37■□□□□ 0.53
CDK4-215ENST00000553237 SLC12A7Q9Y666 1083 aa18.37■□□□□ 0.53
CDK4-215ENST00000553237 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.36■□□□□ 0.53
CDK4-215ENST00000553237 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.36■□□□□ 0.53
CDK4-215ENST00000553237 hCG_1642624A0A1W2PR95 340 aa18.36■□□□□ 0.53
CDK4-215ENST00000553237 CCND2P30279 289 aa18.36■□□□□ 0.53
CDK4-215ENST00000553237 NFRKBQ6P4R8 1299 aa18.36■□□□□ 0.53
CDK4-215ENST00000553237 PSRC1Q6PGN9 363 aaPredicted RBP18.36■□□□□ 0.53
CDK4-215ENST00000553237 DHX37Q8IY37 1157 aaKnown RBP18.36■□□□□ 0.53
CDK4-215ENST00000553237 RASEFQ8IZ41 740 aa18.36■□□□□ 0.53
CDK4-215ENST00000553237 TCEANC2Q96MN5 208 aa18.36■□□□□ 0.53
CDK4-215ENST00000553237 NEK1Q96PY6 1258 aa18.36■□□□□ 0.53
CDK4-215ENST00000553237 LAMA2P24043 3122 aaKnown RBP18.35■□□□□ 0.53
CDK4-215ENST00000553237 GRXCR1A8MXD5 290 aa18.35■□□□□ 0.53
CDK4-215ENST00000553237 CALM1P0DP23 149 aa18.35■□□□□ 0.53
CDK4-215ENST00000553237 CALM2P0DP24 149 aa18.35■□□□□ 0.53
CDK4-215ENST00000553237 CALM3P0DP25 149 aa18.35■□□□□ 0.53
CDK4-215ENST00000553237 CASTP20810 708 aaKnown RBP18.35■□□□□ 0.53
CDK4-215ENST00000553237 SMARCA1P28370 1054 aa18.35■□□□□ 0.53
CDK4-215ENST00000553237 LAMC2Q13753 1193 aa18.35■□□□□ 0.53
CDK4-215ENST00000553237 DGKDQ16760 1214 aa18.35■□□□□ 0.53
CDK4-215ENST00000553237 ADCK5Q3MIX3 580 aa18.35■□□□□ 0.53
CDK4-215ENST00000553237 ERICH6BQ5W0A0 696 aa18.35■□□□□ 0.53
CDK4-215ENST00000553237 USP17L6PQ6QN14 398 aa18.35■□□□□ 0.53
CDK4-215ENST00000553237 MICU3Q86XE3 530 aa18.35■□□□□ 0.53
CDK4-215ENST00000553237 KAT2BQ92831 832 aa18.35■□□□□ 0.53
CDK4-215ENST00000553237 GPKOWQ92917 476 aaPredicted RBP eCLIP18.35■□□□□ 0.53
CDK4-215ENST00000553237 TTYH1Q9H313 450 aaPredicted RBP18.35■□□□□ 0.53
CDK4-215ENST00000553237 PPP4R2Q9NY27 417 aa18.35■□□□□ 0.53
CDK4-215ENST00000553237 SCN10AQ9Y5Y9 1956 aa18.34■□□□□ 0.53
CDK4-215ENST00000553237 KIAA1217Q5T5P2 1943 aa18.34■□□□□ 0.53
CDK4-215ENST00000553237 FGBP02675 491 aa18.34■□□□□ 0.53
CDK4-215ENST00000553237 SP2Q02086 613 aa18.34■□□□□ 0.53
CDK4-215ENST00000553237 SYNE3Q6ZMZ3 975 aa18.34■□□□□ 0.53
CDK4-215ENST00000553237 OTOP2Q7RTS6 562 aa18.34■□□□□ 0.53
CDK4-215ENST00000553237 FANCBQ8NB91 859 aa18.34■□□□□ 0.53
CDK4-215ENST00000553237 SMARCC2Q8TAQ2 1214 aa18.34■□□□□ 0.53
CDK4-215ENST00000553237 EMID1Q96A84 441 aaPredicted RBP18.34■□□□□ 0.53
CDK4-215ENST00000553237 NOD1Q9Y239 953 aa18.34■□□□□ 0.53
CDK4-215ENST00000553237 GGPS1O95749 300 aa18.33■□□□□ 0.52
CDK4-215ENST00000553237 EXOSC10Q01780 885 aaKnown RBP18.33■□□□□ 0.52
CDK4-215ENST00000553237 PTPN11Q06124 597 aaPredicted RBP18.33■□□□□ 0.52
CDK4-215ENST00000553237 CELF3Q5SZQ8 465 aaKnown RBP18.33■□□□□ 0.52
CDK4-215ENST00000553237 RASIP1Q5U651 963 aa18.33■□□□□ 0.52
CDK4-215ENST00000553237 MYSM1Q5VVJ2 828 aa18.33■□□□□ 0.52
CDK4-215ENST00000553237 KCNV1Q6PIU1 500 aa18.33■□□□□ 0.52
CDK4-215ENST00000553237 TMTC3Q6ZXV5 915 aa18.33■□□□□ 0.52
CDK4-215ENST00000553237 DHX32Q7L7V1 743 aaKnown RBP18.33■□□□□ 0.52
CDK4-215ENST00000553237 SGMS1Q86VZ5 419 aa18.33■□□□□ 0.52
CDK4-215ENST00000553237 SLC17A8Q8NDX2 589 aa18.33■□□□□ 0.52
CDK4-215ENST00000553237 PPTC7Q8NI37 304 aa18.33■□□□□ 0.52
CDK4-215ENST00000553237 HERVK_113Q902F9 699 aa18.33■□□□□ 0.52
CDK4-215ENST00000553237 CUL5Q93034 780 aa18.33■□□□□ 0.52
CDK4-215ENST00000553237 CDX2Q99626 313 aaPredicted RBP18.33■□□□□ 0.52
CDK4-215ENST00000553237 ALG1Q9BT22 464 aa18.33■□□□□ 0.52
CDK4-215ENST00000553237 RTEL1Q9NZ71 1219 aa18.33■□□□□ 0.52
CDK4-215ENST00000553237 CXXC1Q9P0U4 656 aaPredicted RBP18.33■□□□□ 0.52
CDK4-215ENST00000553237 ZNF286BP0CG31 522 aa18.32■□□□□ 0.52
CDK4-215ENST00000553237 UBA1P22314 1058 aaKnown RBP18.32■□□□□ 0.52
CDK4-215ENST00000553237 DNAJB2P25686 324 aa18.32■□□□□ 0.52
CDK4-215ENST00000553237 PBX2P40425 430 aa18.32■□□□□ 0.52
CDK4-215ENST00000553237 PSEN2P49810 448 aa18.32■□□□□ 0.52
CDK4-215ENST00000553237 MRPS9P82933 396 aaKnown RBP18.32■□□□□ 0.52
CDK4-215ENST00000553237 HSDL1Q3SXM5 330 aa18.32■□□□□ 0.52
CDK4-215ENST00000553237 GDF6Q6KF10 455 aaPredicted RBP18.32■□□□□ 0.52
CDK4-215ENST00000553237 DEFB128Q7Z7B8 93 aa18.32■□□□□ 0.52
CDK4-215ENST00000553237 RPUSD2Q8IZ73 545 aaKnown RBP18.32■□□□□ 0.52
CDK4-215ENST00000553237 VWCEQ96DN2 955 aa18.32■□□□□ 0.52
CDK4-215ENST00000553237 SPATA33Q96N06 139 aa18.32■□□□□ 0.52
CDK4-215ENST00000553237 BCAS3Q9H6U6 928 aa18.32■□□□□ 0.52
CDK4-215ENST00000553237 MEIS2O14770 477 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms