RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 ADAM17P78536 824 aa5.92□□□□□ -1.46
HCFC2-206ENST00000552343 VWA3BQ502W6 1294 aa5.92□□□□□ -1.46
HCFC2-206ENST00000552343 NT5DC1Q5TFE4 455 aa5.92□□□□□ -1.46
HCFC2-206ENST00000552343 ZNF227Q86WZ6 799 aa5.92□□□□□ -1.46
HCFC2-206ENST00000552343 TRIM59Q8IWR1 403 aa5.92□□□□□ -1.46
HCFC2-206ENST00000552343 ARHGEF39Q8N4T4 335 aa5.92□□□□□ -1.46
HCFC2-206ENST00000552343 FIBCD1Q8N539 461 aa5.92□□□□□ -1.46
HCFC2-206ENST00000552343 ADCY4Q8NFM4 1077 aa5.92□□□□□ -1.46
HCFC2-206ENST00000552343 KCTD13Q8WZ19 329 aa5.92□□□□□ -1.46
HCFC2-206ENST00000552343 SPATA25Q9BR10 227 aa5.92□□□□□ -1.46
HCFC2-206ENST00000552343 PRDM14Q9GZV8 571 aa5.92□□□□□ -1.46
HCFC2-206ENST00000552343 NOL6Q9H6R4 1146 aaKnown RBP5.92□□□□□ -1.46
HCFC2-206ENST00000552343 USP40Q9NVE5 1235 aa5.92□□□□□ -1.46
HCFC2-206ENST00000552343 GFOD1Q9NXC2 390 aa5.92□□□□□ -1.46
HCFC2-206ENST00000552343 CGGBP1Q9UFW8 167 aaPredicted RBP5.92□□□□□ -1.46
HCFC2-206ENST00000552343 ACSL6Q9UKU0 697 aa5.92□□□□□ -1.46
HCFC2-206ENST00000552343 TRBV23-1A0A0A0MS06 115 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 A0A1W2PQU0 124 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 ESYT3A0FGR9 886 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 MATN3O15232 486 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 KCNH1O95259 989 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 PFKLP17858 780 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 NAT1P18440 290 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 HOXC12P31275 282 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 CEBPAP49715 358 aaPredicted RBP5.91□□□□□ -1.46
HCFC2-206ENST00000552343 ZNF445P59923 1031 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 PPP2R2AP63151 447 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 PLEKHN1Q494U1 663 aaPredicted RBP5.91□□□□□ -1.46
HCFC2-206ENST00000552343 LIPIQ6XZB0 460 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 SLCO6A1Q86UG4 719 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 NUP43Q8NFH3 380 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 DHRS4Q9BTZ2 278 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 SUSD2Q9UGT4 822 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 EMC9Q9Y3B6 208 aa5.91□□□□□ -1.46
HCFC2-206ENST00000552343 TRBV23OR9-2A0A075B6M9 112 aa5.9□□□□□ -1.46
HCFC2-206ENST00000552343 PRAMEF1O95521 474 aa5.9□□□□□ -1.46
HCFC2-206ENST00000552343 PLA2G1BP04054 148 aaKnown RBP5.9□□□□□ -1.46
HCFC2-206ENST00000552343 ZNF200P98182 395 aaPredicted RBP5.9□□□□□ -1.46
HCFC2-206ENST00000552343 PPP2R5DQ14738 602 aa5.9□□□□□ -1.46
HCFC2-206ENST00000552343 NSMFQ6X4W1 530 aa5.9□□□□□ -1.46
HCFC2-206ENST00000552343 KIAA0907Q7Z7F0 614 aaPredicted RBP5.9□□□□□ -1.46
HCFC2-206ENST00000552343 SLC16A11Q8NCK7 471 aa5.9□□□□□ -1.46
HCFC2-206ENST00000552343 FNIP1Q8TF40 1166 aa5.9□□□□□ -1.46
HCFC2-206ENST00000552343 BRF1Q92994 677 aa5.9□□□□□ -1.46
HCFC2-206ENST00000552343 ZDHHC15Q96MV8 337 aa5.9□□□□□ -1.46
HCFC2-206ENST00000552343 ERVK13-1Q9NX77 482 aa5.9□□□□□ -1.46
HCFC2-206ENST00000552343 APEX2Q9UBZ4 518 aa5.9□□□□□ -1.46
HCFC2-206ENST00000552343 MINPP1Q9UNW1 487 aa5.9□□□□□ -1.46
HCFC2-206ENST00000552343 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.9□□□□□ -1.46
HCFC2-206ENST00000552343 A0A1W2PQ45 241 aaPredicted RBP5.89□□□□□ -1.47
HCFC2-206ENST00000552343 A0A1W2PQY0 241 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 SHOXO15266 292 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 DNAJC6O75061 913 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 EFCAB14O75071 495 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 ASMTLO95671 621 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 FAM153BP0C7A2 387 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 MSL3P1P0C860 447 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 KCNJ6P48051 423 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 MAPKAPK2P49137 400 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 ZC3H14Q6PJT7 736 aaKnown RBP5.89□□□□□ -1.47
HCFC2-206ENST00000552343 DHX37Q8IY37 1157 aaKnown RBP5.89□□□□□ -1.47
HCFC2-206ENST00000552343 ANKRD13AQ8IZ07 590 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 MRPL4Q9BYD3 311 aaKnown RBP5.89□□□□□ -1.47
HCFC2-206ENST00000552343 NKX2-4Q9H2Z4 354 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 SPC25Q9HBM1 224 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 CYP26B1Q9NR63 512 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 SMPD4Q9NXE4 827 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 DUSP10Q9Y6W6 482 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 SBNO2Q9Y2G9 1366 aa5.89□□□□□ -1.47
HCFC2-206ENST00000552343 PLD2O14939 933 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 PRODHO43272 600 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 ADCY3O60266 1144 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 FSHBP01225 129 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 ITGB3P05106 788 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 SNRPB2P08579 225 aaKnown RBP5.88□□□□□ -1.47
HCFC2-206ENST00000552343 PABPC1P11940 636 aaKnown RBP5.88□□□□□ -1.47
HCFC2-206ENST00000552343 BMP8BP34820 402 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 FOXO4P98177 505 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 MAP4K2Q12851 820 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 SQSTM1Q13501 440 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 NR1I3Q14994 352 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 FNDC3BQ53EP0 1204 aaKnown RBP5.88□□□□□ -1.47
HCFC2-206ENST00000552343 GTF2IRD2BQ6EKJ0 949 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 GTF2IRD2Q86UP8 949 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 MRGPRX3Q96LB0 322 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 ARHGEF4Q9NR80 690 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 IMPACTQ9P2X3 320 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 SRRDQ9UH36 339 aa5.88□□□□□ -1.47
HCFC2-206ENST00000552343 MRPS23Q9Y3D9 190 aaKnown RBP5.88□□□□□ -1.47
HCFC2-206ENST00000552343 OVOL3O00110 214 aa5.87□□□□□ -1.47
HCFC2-206ENST00000552343 RFPL3O75679 317 aa5.87□□□□□ -1.47
HCFC2-206ENST00000552343 FBLN1P23142 703 aa5.87□□□□□ -1.47
HCFC2-206ENST00000552343 CNR2P34972 360 aa5.87□□□□□ -1.47
HCFC2-206ENST00000552343 SEPHS1P49903 392 aa5.87□□□□□ -1.47
HCFC2-206ENST00000552343 GABREP78334 506 aa5.87□□□□□ -1.47
HCFC2-206ENST00000552343 TARBP2Q15633 366 aaKnown RBP5.87□□□□□ -1.47
HCFC2-206ENST00000552343 EEF1DP3Q658K8 133 aa5.87□□□□□ -1.47
HCFC2-206ENST00000552343 IQCEQ6IPM2 695 aa5.87□□□□□ -1.47
HCFC2-206ENST00000552343 MAMDC2Q7Z304 686 aaPredicted RBP5.87□□□□□ -1.47
HCFC2-206ENST00000552343 SAPCD2Q86UD0 394 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms