RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 CCDC155Q8N6L0 562 aa25.38■■□□□ 1.65
SMARCD1-212ENST00000551966 HDAC6Q9UBN7 1215 aa25.38■■□□□ 1.65
SMARCD1-212ENST00000551966 CKBP12277 381 aa25.37■■□□□ 1.65
SMARCD1-212ENST00000551966 GDPD5Q8WTR4 605 aa25.37■■□□□ 1.65
SMARCD1-212ENST00000551966 GTF2IRD1Q9UHL9 959 aa25.37■■□□□ 1.65
SMARCD1-212ENST00000551966 DDX41Q9UJV9 622 aaKnown RBP25.37■■□□□ 1.65
SMARCD1-212ENST00000551966 CASTP20810 708 aaKnown RBP25.36■■□□□ 1.65
SMARCD1-212ENST00000551966 CNKSR3Q6P9H4 555 aa25.36■■□□□ 1.65
SMARCD1-212ENST00000551966 TRAF7Q6Q0C0 670 aa25.36■■□□□ 1.65
SMARCD1-212ENST00000551966 DGKHQ86XP1 1220 aa25.36■■□□□ 1.65
SMARCD1-212ENST00000551966 NSUN6Q8TEA1 469 aaKnown RBP25.36■■□□□ 1.65
SMARCD1-212ENST00000551966 ZBED2Q9BTP6 218 aa25.36■■□□□ 1.65
SMARCD1-212ENST00000551966 MAF1Q9H063 256 aa25.36■■□□□ 1.65
SMARCD1-212ENST00000551966 SUGCTQ9HAC7 445 aa25.36■■□□□ 1.65
SMARCD1-212ENST00000551966 CD320Q9NPF0 282 aa25.36■■□□□ 1.65
SMARCD1-212ENST00000551966 LMCD1Q9NZU5 365 aa25.36■■□□□ 1.65
SMARCD1-212ENST00000551966 PCP11498 1178 aaKnown RBP25.35■■□□□ 1.65
SMARCD1-212ENST00000551966 STXBP2Q15833 593 aa25.35■■□□□ 1.65
SMARCD1-212ENST00000551966 CDC37Q16543 378 aaPredicted RBP25.35■■□□□ 1.65
SMARCD1-212ENST00000551966 ADGRF4Q8IZF3 695 aa25.35■■□□□ 1.65
SMARCD1-212ENST00000551966 C11orf16Q9NQ32 467 aa25.35■■□□□ 1.65
SMARCD1-212ENST00000551966 NEDD4P46934 1319 aa25.35■■□□□ 1.65
SMARCD1-212ENST00000551966 COL4A4P53420 1690 aaPredicted RBP25.34■■□□□ 1.65
SMARCD1-212ENST00000551966 GJB5O95377 273 aa25.34■■□□□ 1.65
SMARCD1-212ENST00000551966 TRIM71Q2Q1W2 868 aaKnown RBP25.34■■□□□ 1.65
SMARCD1-212ENST00000551966 TICAM2Q86XR7 235 aa25.34■■□□□ 1.65
SMARCD1-212ENST00000551966 WNT8BQ93098 351 aa25.34■■□□□ 1.65
SMARCD1-212ENST00000551966 IWS1Q96ST2 819 aa25.34■■□□□ 1.65
SMARCD1-212ENST00000551966 RMDN3Q96TC7 470 aa25.34■■□□□ 1.65
SMARCD1-212ENST00000551966 RAD9AQ99638 391 aa25.34■■□□□ 1.65
SMARCD1-212ENST00000551966 ALG1Q9BT22 464 aa25.34■■□□□ 1.65
SMARCD1-212ENST00000551966 ABCB11O95342 1321 aa25.34■■□□□ 1.65
SMARCD1-212ENST00000551966 CCDC171Q6TFL3 1326 aa25.34■■□□□ 1.65
SMARCD1-212ENST00000551966 ABHD14A-ACY1A0A1B0GW23 586 aa25.33■■□□□ 1.65
SMARCD1-212ENST00000551966 LINC01553A4QN01 128 aa25.33■■□□□ 1.65
SMARCD1-212ENST00000551966 HAS3O00219 553 aa25.33■■□□□ 1.65
SMARCD1-212ENST00000551966 PARNO95453 639 aaKnown RBP25.33■■□□□ 1.65
SMARCD1-212ENST00000551966 HOXD11P31277 338 aaPredicted RBP25.33■■□□□ 1.65
SMARCD1-212ENST00000551966 PSEN2P49810 448 aa25.33■■□□□ 1.65
SMARCD1-212ENST00000551966 ERVK-21P61565 698 aa25.33■■□□□ 1.65
SMARCD1-212ENST00000551966 ZNF200P98182 395 aaPredicted RBP25.33■■□□□ 1.65
SMARCD1-212ENST00000551966 HIC1Q14526 733 aa25.33■■□□□ 1.65
SMARCD1-212ENST00000551966 DGKDQ16760 1214 aa25.33■■□□□ 1.65
SMARCD1-212ENST00000551966 ESR2Q92731 530 aa25.33■■□□□ 1.65
SMARCD1-212ENST00000551966 MTUS1Q9ULD2 1270 aa25.33■■□□□ 1.65
SMARCD1-212ENST00000551966 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.32■■□□□ 1.64
SMARCD1-212ENST00000551966 MBTPS1Q14703 1052 aa25.32■■□□□ 1.64
SMARCD1-212ENST00000551966 QRICH1Q2TAL8 776 aa25.32■■□□□ 1.64
SMARCD1-212ENST00000551966 TMEM31Q5JXX7 168 aa25.32■■□□□ 1.64
SMARCD1-212ENST00000551966 C7orf31Q8N865 590 aa25.32■■□□□ 1.64
SMARCD1-212ENST00000551966 PNMA1Q8ND90 353 aa25.32■■□□□ 1.64
SMARCD1-212ENST00000551966 ANKS1AQ92625 1134 aa25.32■■□□□ 1.64
SMARCD1-212ENST00000551966 EMID1Q96A84 441 aaPredicted RBP25.32■■□□□ 1.64
SMARCD1-212ENST00000551966 ZBTB47Q9UFB7 747 aaPredicted RBP25.32■■□□□ 1.64
SMARCD1-212ENST00000551966 ARIH1Q9Y4X5 557 aaPredicted RBP25.32■■□□□ 1.64
SMARCD1-212ENST00000551966 KIAA1217Q5T5P2 1943 aa25.31■■□□□ 1.64
SMARCD1-212ENST00000551966 EIF3JO75822 258 aaKnown RBP25.31■■□□□ 1.64
SMARCD1-212ENST00000551966 EIF2AK2P19525 551 aaKnown RBP25.31■■□□□ 1.64
SMARCD1-212ENST00000551966 PTK7Q13308 1070 aa25.31■■□□□ 1.64
SMARCD1-212ENST00000551966 ZNF618Q5T7W0 954 aa25.31■■□□□ 1.64
SMARCD1-212ENST00000551966 MCF2L2Q86YR7 1114 aa25.31■■□□□ 1.64
SMARCD1-212ENST00000551966 TGS1Q96RS0 853 aaKnown RBP25.31■■□□□ 1.64
SMARCD1-212ENST00000551966 RNF41Q9H4P4 317 aaPredicted RBP25.31■■□□□ 1.64
SMARCD1-212ENST00000551966 GPR37L1O60883 481 aa25.3■■□□□ 1.64
SMARCD1-212ENST00000551966 NR3C2P08235 984 aa25.3■■□□□ 1.64
SMARCD1-212ENST00000551966 IKBKEQ14164 716 aa25.3■■□□□ 1.64
SMARCD1-212ENST00000551966 MFSD10Q14728 455 aa25.3■■□□□ 1.64
SMARCD1-212ENST00000551966 KIAA0753Q2KHM9 967 aa25.3■■□□□ 1.64
SMARCD1-212ENST00000551966 ARHGEF16Q5VV41 709 aa25.3■■□□□ 1.64
SMARCD1-212ENST00000551966 FAM117BQ6P1L5 589 aa25.3■■□□□ 1.64
SMARCD1-212ENST00000551966 JMJD4Q9H9V9 463 aa25.3■■□□□ 1.64
SMARCD1-212ENST00000551966 VAT1LQ9HCJ6 419 aa25.3■■□□□ 1.64
SMARCD1-212ENST00000551966 ZNF213O14771 459 aa25.29■■□□□ 1.64
SMARCD1-212ENST00000551966 OPLAHO14841 1288 aa25.29■■□□□ 1.64
SMARCD1-212ENST00000551966 KDM4AO75164 1064 aa25.29■■□□□ 1.64
SMARCD1-212ENST00000551966 RGS20O76081 388 aa25.29■■□□□ 1.64
SMARCD1-212ENST00000551966 F2P00734 622 aa25.29■■□□□ 1.64
SMARCD1-212ENST00000551966 ZNF286BP0CG31 522 aa25.29■■□□□ 1.64
SMARCD1-212ENST00000551966 LAMC2Q13753 1193 aa25.29■■□□□ 1.64
SMARCD1-212ENST00000551966 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.29■■□□□ 1.64
SMARCD1-212ENST00000551966 PPTC7Q8NI37 304 aa25.29■■□□□ 1.64
SMARCD1-212ENST00000551966 PXMP2Q9NR77 195 aa25.29■■□□□ 1.64
SMARCD1-212ENST00000551966 MRPL11Q9Y3B7 192 aaKnown RBP25.29■■□□□ 1.64
SMARCD1-212ENST00000551966 TRIM6-TRIM34B2RNG4 842 aa25.28■■□□□ 1.64
SMARCD1-212ENST00000551966 PI4K2BG5E9Z4 385 aa25.28■■□□□ 1.64
SMARCD1-212ENST00000551966 SDSP20132 328 aa25.28■■□□□ 1.64
SMARCD1-212ENST00000551966 FBXO11Q86XK2 927 aa25.28■■□□□ 1.64
SMARCD1-212ENST00000551966 RILPL2Q969X0 211 aa25.28■■□□□ 1.64
SMARCD1-212ENST00000551966 KATNAL1Q9BW62 490 aa25.28■■□□□ 1.64
SMARCD1-212ENST00000551966 UBE2ZQ9H832 354 aaPredicted RBP25.28■■□□□ 1.64
SMARCD1-212ENST00000551966 KAT14Q9H8E8 782 aa25.28■■□□□ 1.64
SMARCD1-212ENST00000551966 MRVI1Q9Y6F6 885 aa25.28■■□□□ 1.64
SMARCD1-212ENST00000551966 FAM86C2PA6NEL3 165 aa25.27■■□□□ 1.64
SMARCD1-212ENST00000551966 HOXD8P13378 290 aaPredicted RBP25.27■■□□□ 1.64
SMARCD1-212ENST00000551966 MKRN4PQ13434 485 aaPredicted RBP25.27■■□□□ 1.64
SMARCD1-212ENST00000551966 DHX37Q8IY37 1157 aaKnown RBP25.27■■□□□ 1.64
SMARCD1-212ENST00000551966 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.27■■□□□ 1.64
SMARCD1-212ENST00000551966 ZSCAN10Q96SZ4 725 aaPredicted RBP25.27■■□□□ 1.64
SMARCD1-212ENST00000551966 ZSWIM5Q9P217 1185 aa25.27■■□□□ 1.64
SMARCD1-212ENST00000551966 MYH7BA7E2Y1 1941 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms