RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 OSBPP22059 807 aa18.69■□□□□ 0.58
CHMP1A-204ENST00000547687 IKQ13123 557 aaPredicted RBP18.69■□□□□ 0.58
CHMP1A-204ENST00000547687 GRAMD1CQ8IYS0 662 aa18.69■□□□□ 0.58
CHMP1A-204ENST00000547687 SH3TC2Q8TF17 1288 aa18.69■□□□□ 0.58
CHMP1A-204ENST00000547687 SPTLC3Q9NUV7 552 aa18.69■□□□□ 0.58
CHMP1A-204ENST00000547687 A0A087X0B3 334 aa18.69■□□□□ 0.58
CHMP1A-204ENST00000547687 ESYT2A0FGR8 921 aa18.69■□□□□ 0.58
CHMP1A-204ENST00000547687 QRICH1Q2TAL8 776 aa18.69■□□□□ 0.58
CHMP1A-204ENST00000547687 VCPKMTQ9H867 229 aa18.69■□□□□ 0.58
CHMP1A-204ENST00000547687 GABRQQ9UN88 632 aa18.69■□□□□ 0.58
CHMP1A-204ENST00000547687 SLFN14P0C7P3 912 aa18.68■□□□□ 0.58
CHMP1A-204ENST00000547687 BMP6P22004 513 aa18.68■□□□□ 0.58
CHMP1A-204ENST00000547687 MYL5Q02045 173 aa18.68■□□□□ 0.58
CHMP1A-204ENST00000547687 LRMPQ12912 555 aa18.68■□□□□ 0.58
CHMP1A-204ENST00000547687 CDC37Q16543 378 aaPredicted RBP18.68■□□□□ 0.58
CHMP1A-204ENST00000547687 TXNRD2Q9NNW7 524 aa18.68■□□□□ 0.58
CHMP1A-204ENST00000547687 PRKCZQ05513 592 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 PABPC4Q13310 644 aaKnown RBP eCLIP18.67■□□□□ 0.584e-8■■□□□ 14.2
CHMP1A-204ENST00000547687 ARHGEF6Q15052 776 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 FAM83BQ5T0W9 1011 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 ARL6IP4Q66PJ3 421 aaKnown RBP18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 POTEEQ6S8J3 1075 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 BTNL9Q6UXG8 535 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 C4orf32Q8N8J7 132 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 TRIML1Q8N9V2 468 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 CACTINQ8WUQ7 758 aaKnown RBP18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 SH2D4AQ9H788 454 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 IFNKQ9P0W0 207 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 R3HCC1Q9Y3T6 440 aaKnown RBP18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 SMC2O95347 1197 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 VCAM1P19320 739 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 SNAP25P60880 206 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 MORC3Q14149 939 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 IL17AQ16552 155 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 SLC9C1Q4G0N8 1177 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 SYDE2Q5VT97 1194 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 MLKLQ8NB16 471 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 XPO4Q9C0E2 1151 aaKnown RBP18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 KIAA1683Q9H0B3 1180 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 SRRDQ9UH36 339 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 MYPNQ86TC9 1320 aa18.67■□□□□ 0.58
CHMP1A-204ENST00000547687 HOXA7P31268 230 aaPredicted RBP18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 ADCY7P51828 1080 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 FCGRTP55899 365 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 HERVK_113P62684 666 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 INF2Q27J81 1249 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 DNTTIP2Q5QJE6 756 aaKnown RBP18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 SH3RF1Q7Z6J0 888 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 SPATA20Q8TB22 786 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 PAGE5Q96GU1 130 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 PAGR1Q9BTK6 254 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 HSD3B7Q9H2F3 369 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 BIN2Q9UBW5 565 aaPredicted RBP18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 DACH1Q9UI36 760 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 PDE4DIPQ5VU43 2346 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 AFMP43652 599 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 STAT2P52630 851 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 FANCCQ00597 558 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 PPP1R18Q6NYC8 613 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 FILIP1Q7Z7B0 1213 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 LRRC8AQ8IWT6 810 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 REXO1Q8N1G1 1221 aaKnown RBP18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 PRR12Q9ULL5 1215 aa18.66■□□□□ 0.58
CHMP1A-204ENST00000547687 RLFQ13129 1914 aa18.65■□□□□ 0.58
CHMP1A-204ENST00000547687 PLXNB2O15031 1838 aa18.65■□□□□ 0.58
CHMP1A-204ENST00000547687 TNPO2O14787 897 aaKnown RBP18.65■□□□□ 0.58
CHMP1A-204ENST00000547687 NEMFO60524 1076 aa18.65■□□□□ 0.58
CHMP1A-204ENST00000547687 FAM110CQ1W6H9 321 aa18.65■□□□□ 0.58
CHMP1A-204ENST00000547687 JAKMIP3Q5VZ66 844 aa18.65■□□□□ 0.58
CHMP1A-204ENST00000547687 KRT25Q7Z3Z0 450 aa18.65■□□□□ 0.58
CHMP1A-204ENST00000547687 PYM1Q9BRP8 204 aaKnown RBP18.65■□□□□ 0.58
CHMP1A-204ENST00000547687 RPAP3Q9H6T3 665 aaPredicted RBP18.65■□□□□ 0.58
CHMP1A-204ENST00000547687 TMEM260Q9NX78 707 aa18.65■□□□□ 0.58
CHMP1A-204ENST00000547687 PCDHA1Q9Y5I3 950 aa18.65■□□□□ 0.58
CHMP1A-204ENST00000547687 LONP1P36776 959 aaKnown RBP18.64■□□□□ 0.58
CHMP1A-204ENST00000547687 USP14P54578 494 aa18.64■□□□□ 0.58
CHMP1A-204ENST00000547687 SAMD1Q6SPF0 538 aaPredicted RBP18.64■□□□□ 0.58
CHMP1A-204ENST00000547687 IQUBQ8NA54 791 aa18.64■□□□□ 0.58
CHMP1A-204ENST00000547687 RAET1EQ8TD07 263 aa18.64■□□□□ 0.58
CHMP1A-204ENST00000547687 C12orf42Q96LP6 360 aa18.64■□□□□ 0.58
CHMP1A-204ENST00000547687 IMPACTQ9P2X3 320 aa18.64■□□□□ 0.58
CHMP1A-204ENST00000547687 PARP14Q460N5 1801 aa18.64■□□□□ 0.57
CHMP1A-204ENST00000547687 POTEFA5A3E0 1075 aa18.64■□□□□ 0.57
CHMP1A-204ENST00000547687 ATP1A3P13637 1013 aa18.64■□□□□ 0.57
CHMP1A-204ENST00000547687 GCLCP48506 637 aaPredicted RBP18.64■□□□□ 0.57
CHMP1A-204ENST00000547687 TERF1P54274 439 aa18.64■□□□□ 0.57
CHMP1A-204ENST00000547687 NONOQ15233 471 aaKnown RBP eCLIP18.64■□□□□ 0.57
CHMP1A-204ENST00000547687 Q3C1V9 767 aa18.64■□□□□ 0.57
CHMP1A-204ENST00000547687 RIC8AQ9NPQ8 531 aa18.64■□□□□ 0.57
CHMP1A-204ENST00000547687 FANCLQ9NW38 375 aa18.64■□□□□ 0.57
CHMP1A-204ENST00000547687 RBPJLQ9UBG7 517 aa18.64■□□□□ 0.57
CHMP1A-204ENST00000547687 COL11A1P12107 1806 aaPredicted RBP18.63■□□□□ 0.57
CHMP1A-204ENST00000547687 SMCHD1A6NHR9 2005 aa18.63■□□□□ 0.57
CHMP1A-204ENST00000547687 ARID5BQ14865 1188 aa18.63■□□□□ 0.57
CHMP1A-204ENST00000547687 CATSPERGQ6ZRH7 1159 aa18.63■□□□□ 0.57
CHMP1A-204ENST00000547687 AMNQ9BXJ7 453 aa18.63■□□□□ 0.57
CHMP1A-204ENST00000547687 USP17L15C9J2P7 530 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 USP17L13C9JLJ4 530 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 USP17L11C9JVI0 530 aa18.62■□□□□ 0.57
CHMP1A-204ENST00000547687 USP17L18D6R9N7 530 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms