RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 PPFIBP1Q86W92 1011 aa3.22□□□□□ -1.89
CPNE8-205ENST00000547417 FAM169BQ8N8A8 192 aa3.22□□□□□ -1.89
CPNE8-205ENST00000547417 JMYQ8N9B5 988 aa3.22□□□□□ -1.89
CPNE8-205ENST00000547417 ST13P5Q8NFI4 369 aaPredicted RBP3.22□□□□□ -1.89
CPNE8-205ENST00000547417 SH3TC2Q8TF17 1288 aa3.22□□□□□ -1.89
CPNE8-205ENST00000547417 DDX1Q92499 740 aaKnown RBP3.22□□□□□ -1.89
CPNE8-205ENST00000547417 TSPAN17Q96FV3 270 aa3.22□□□□□ -1.89
CPNE8-205ENST00000547417 TM9SF2Q99805 663 aa3.22□□□□□ -1.89
CPNE8-205ENST00000547417 IFT57Q9NWB7 429 aa3.22□□□□□ -1.89
CPNE8-205ENST00000547417 SMPD4Q9NXE4 827 aa3.22□□□□□ -1.89
CPNE8-205ENST00000547417 DIS3Q9Y2L1 958 aaKnown RBP3.22□□□□□ -1.89
CPNE8-205ENST00000547417 A0A087WZG4 1122 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 AKAP8O43823 692 aaKnown RBP3.21□□□□□ -1.9
CPNE8-205ENST00000547417 TP53P04637 393 aaPredicted RBP3.21□□□□□ -1.9
CPNE8-205ENST00000547417 ITGA4P13612 1032 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 IFNGR1P15260 489 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 PMLP29590 882 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 SLC9A5Q14940 896 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 LONRF2Q1L5Z9 754 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 ZC3H12BQ5HYM0 836 aaKnown RBP3.21□□□□□ -1.9
CPNE8-205ENST00000547417 CCDC81Q6ZN84 652 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 TTLL7Q6ZT98 887 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 FILIP1Q7Z7B0 1213 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 LILRB2Q8N423 598 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 NETO2Q8NC67 525 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 SMARCC2Q8TAQ2 1214 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 THAP3Q8WTV1 239 aaPredicted RBP3.21□□□□□ -1.9
CPNE8-205ENST00000547417 CPA5Q8WXQ8 436 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 PEX11GQ96HA9 241 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 GPATCH3Q96I76 525 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 ZDHHC15Q96MV8 337 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 NOL6Q9H6R4 1146 aaKnown RBP3.21□□□□□ -1.9
CPNE8-205ENST00000547417 BCAS3Q9H6U6 928 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 RXFP1Q9HBX9 757 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 PCDH12Q9NPG4 1184 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 FANCLQ9NW38 375 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 TMEM260Q9NX78 707 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 NTMQ9P121 344 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 NUDT5Q9UKK9 219 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 ZNF451Q9Y4E5 1061 aa3.21□□□□□ -1.9
CPNE8-205ENST00000547417 CCDC85CA6NKD9 419 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 OVOL3O00110 214 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 ZBTB7AO95365 584 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 TNFRSF1AP19438 455 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 ZXDAP98168 799 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 CACNB2Q08289 660 aaPredicted RBP3.2□□□□□ -1.9
CPNE8-205ENST00000547417 NCAPHQ15003 741 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 MTERF2Q49AM1 385 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 C2orf27AQ580R0 203 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 EEF1DP3Q658K8 133 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 RCSD1Q6JBY9 416 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 UNC5AQ6ZN44 842 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 EEPD1Q7L9B9 569 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 ZNF761Q86XN6 746 aaPredicted RBP3.2□□□□□ -1.9
CPNE8-205ENST00000547417 LZTR1Q8N653 840 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 CELF2-AS1Q8N7Q2 184 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 NOX5Q96PH1 765 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 RBM15Q96T37 977 aaKnown RBP eCLIP3.2□□□□□ -1.9
CPNE8-205ENST00000547417 FEZ1Q99689 392 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 EPN3Q9H201 632 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 ST7Q9NRC1 585 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 SPATA6Q9NWH7 488 aaPredicted RBP3.2□□□□□ -1.9
CPNE8-205ENST00000547417 COL4A3BPQ9Y5P4 624 aa3.2□□□□□ -1.9
CPNE8-205ENST00000547417 CCDC163A0A0D9SF12 145 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 A0A1W2PQH9 124 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 IQCA1LA6NCM1 817 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 AURKAO14965 403 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 RAB11FIP3O75154 756 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 DDAH1O94760 285 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 GJB6O95452 261 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 GUCY2CP25092 1073 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 GYS2P54840 703 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 PPP2R5DQ14738 602 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 TCEA2Q15560 299 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 ZYXQ15942 572 aaKnown RBP3.19□□□□□ -1.9
CPNE8-205ENST00000547417 PPP2R5EQ16537 467 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 CCDC181Q5TID7 509 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 LARP1BQ659C4 914 aaKnown RBP3.19□□□□□ -1.9
CPNE8-205ENST00000547417 CPZQ66K79 652 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 ADAMTS17Q8TE56 1095 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 ZBTB8AQ96BR9 441 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 LOXL4Q96JB6 756 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 SAMD11Q96NU1 681 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 PHAXQ9H814 394 aaKnown RBP3.19□□□□□ -1.9
CPNE8-205ENST00000547417 TYW1Q9NV66 732 aaKnown RBP3.19□□□□□ -1.9
CPNE8-205ENST00000547417 FAM86C1Q9NVL1 165 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 WHRNQ9P202 907 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 ZNF214Q9UL59 606 aaPredicted RBP3.19□□□□□ -1.9
CPNE8-205ENST00000547417 PLAAQ9Y263 795 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 RWDD3Q9Y3V2 267 aa3.19□□□□□ -1.9
CPNE8-205ENST00000547417 ESYT3A0FGR9 886 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 C1QTNF3-AMACRE9PGA6 284 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 MATN3O15232 486 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 CBFA2T2O43439 604 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 MARCH6O60337 910 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 PPP1R11O60927 126 aaPredicted RBP3.18□□□□□ -1.9
CPNE8-205ENST00000547417 PLATP00750 562 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 VIL1P09327 827 aaKnown RBP3.18□□□□□ -1.9
CPNE8-205ENST00000547417 SEPHS1P49903 392 aa3.18□□□□□ -1.9
CPNE8-205ENST00000547417 RBM10P98175 930 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms