RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 CACNA1HO95180 2353 aa8.65□□□□□ -1.02
COPA-207ENST00000545284 TECTAO75443 2155 aa8.65□□□□□ -1.03
COPA-207ENST00000545284 GH1P01241 217 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 IFIT2P09913 472 aaKnown RBP8.64□□□□□ -1.03
COPA-207ENST00000545284 TSPY3P0CV98 308 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 TSPY8P0CW00 308 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 ATF7P17544 494 aaPredicted RBP8.64□□□□□ -1.03
COPA-207ENST00000545284 GNAT2P19087 354 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 PDE4BQ07343 736 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 DLX2Q07687 328 aaPredicted RBP8.64□□□□□ -1.03
COPA-207ENST00000545284 TRIM71Q2Q1W2 868 aaKnown RBP8.64□□□□□ -1.03
COPA-207ENST00000545284 NAALADL2Q58DX5 795 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 ZNF618Q5T7W0 954 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 TRAF7Q6Q0C0 670 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.64□□□□□ -1.031e-24■■■■■ 79
COPA-207ENST00000545284 ASCL5Q7RTU5 278 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 FIBCD1Q8N539 461 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 RGS22Q8NE09 1264 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 RHPN1Q8TCX5 695 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 SEPT8Q92599 483 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 KAT2BQ92831 832 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 APBB2Q92870 758 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 CLP1Q92989 425 aaKnown RBP8.64□□□□□ -1.03
COPA-207ENST00000545284 NKD2Q969F2 451 aaPredicted RBP8.64□□□□□ -1.03
COPA-207ENST00000545284 EMID1Q96A84 441 aaPredicted RBP8.64□□□□□ -1.03
COPA-207ENST00000545284 STRBPQ96SI9 672 aaKnown RBP8.64□□□□□ -1.03
COPA-207ENST00000545284 PHF7Q9BWX1 381 aaPredicted RBP8.64□□□□□ -1.03
COPA-207ENST00000545284 FAM86C1Q9NVL1 165 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 PRR12Q9ULL5 1215 aa8.64□□□□□ -1.03
COPA-207ENST00000545284 COL4A4P53420 1690 aaPredicted RBP8.64□□□□□ -1.03
COPA-207ENST00000545284 GSG1L2A8MUP6 293 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 RSPH10B2B2RC85 870 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 H0Y858 1186 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 MMP3P08254 477 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 RSPH10BP0C881 870 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 ATP5JP18859 108 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 TCTN1Q2MV58 587 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 CCDC62Q6P9F0 684 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 BTNL9Q6UXG8 535 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 TMEM57Q8N5G2 664 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 P2RX5Q93086 422 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 KIF1BPQ96EK5 621 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 IL17RAQ96F46 866 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 RIPOR3Q96MK2 946 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 HAUS7Q99871 368 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 PUS7LQ9H0K6 701 aaKnown RBP8.63□□□□□ -1.03
COPA-207ENST00000545284 RANBP17Q9H2T7 1088 aaKnown RBP8.63□□□□□ -1.03
COPA-207ENST00000545284 TLR9Q9NR96 1032 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 C5orf42Q9H799 3197 aa8.63□□□□□ -1.03
COPA-207ENST00000545284 MYO5AQ9Y4I1 1855 aaKnown RBP8.62□□□□□ -1.03
COPA-207ENST00000545284 SIP14410 1827 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 PTPDC1A2A3K4 754 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 MINDY4BA8MYZ0 360 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 HAS3O00219 553 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 TBX10O75333 385 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 PPFIA4O75335 1185 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 MMP1P03956 469 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 SLC3A2P08195 630 aaKnown RBP8.62□□□□□ -1.03
COPA-207ENST00000545284 MCCP23508 829 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 NDUFV1P49821 464 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 VCPP55072 806 aaKnown RBP8.62□□□□□ -1.03
COPA-207ENST00000545284 LAMC2Q13753 1193 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 MBTPS1Q14703 1052 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 ZKSCAN2Q63HK3 967 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 RNF207Q6ZRF8 634 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 UBALD2Q8IYN6 164 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 EFHBQ8N7U6 833 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 AFG1LQ8WV93 481 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 CLUAP1Q96AJ1 413 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 HDAC6Q9UBN7 1215 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 ISY1Q9ULR0 285 aaKnown RBP8.62□□□□□ -1.03
COPA-207ENST00000545284 DDX49Q9Y6V7 483 aaKnown RBP8.62□□□□□ -1.03
COPA-207ENST00000545284 SCN5AQ14524 2016 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 TANC1Q9C0D5 1861 aa8.62□□□□□ -1.03
COPA-207ENST00000545284 MYO15AQ9UKN7 3530 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 MCM3APO60318 1980 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 GREB1LQ9C091 1923 aaPredicted RBP8.61□□□□□ -1.03
COPA-207ENST00000545284 ZNF316A6NFI3 1004 aaPredicted RBP8.61□□□□□ -1.03
COPA-207ENST00000545284 NFIBO00712 420 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 F2P00734 622 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 HOXD8P13378 290 aaPredicted RBP8.61□□□□□ -1.03
COPA-207ENST00000545284 CTNNB1P35222 781 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 PSEN2P49810 448 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 RRP1P56182 461 aaKnown RBP8.61□□□□□ -1.03
COPA-207ENST00000545284 CHMP4BP1P59074 171 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 ARHGAP1Q07960 439 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 MFSD10Q14728 455 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 CLUL1Q15846 466 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 PTPN21Q16825 1174 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 KIAA0753Q2KHM9 967 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 FAM43BQ6ZT52 329 aaPredicted RBP8.61□□□□□ -1.03
COPA-207ENST00000545284 SERINC5Q86VE9 423 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 TET1Q8NFU7 2136 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 PPTC7Q8NI37 304 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 DCAF4Q8WV16 495 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 FRAT1Q92837 279 aaPredicted RBP8.61□□□□□ -1.03
COPA-207ENST00000545284 COPS5Q92905 334 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 PURBQ96QR8 312 aaKnown RBP8.61□□□□□ -1.03
COPA-207ENST00000545284 IWS1Q96ST2 819 aa8.61□□□□□ -1.03
COPA-207ENST00000545284 IFIH1Q9BYX4 1025 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms