RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 HECW2Q9P2P5 1572 aa13.98□□□□□ -0.17
CHD4-211ENST00000544484 ZNF500O60304 480 aaPredicted RBP13.98□□□□□ -0.17
CHD4-211ENST00000544484 PSMC2P35998 433 aaKnown RBP13.98□□□□□ -0.17
CHD4-211ENST00000544484 AOC3Q16853 763 aa13.98□□□□□ -0.17
CHD4-211ENST00000544484 PLCB1Q9NQ66 1216 aa13.98□□□□□ -0.17
CHD4-211ENST00000544484 CCDC93Q567U6 631 aa13.98□□□□□ -0.17
CHD4-211ENST00000544484 PTPN22Q9Y2R2 807 aa13.98□□□□□ -0.17
CHD4-211ENST00000544484 UBN2Q6ZU65 1347 aa13.98□□□□□ -0.17
CHD4-211ENST00000544484 PALM3A6NDB9 673 aaPredicted RBP13.98□□□□□ -0.17
CHD4-211ENST00000544484 FAM196BA6NMK8 535 aa13.98□□□□□ -0.17
CHD4-211ENST00000544484 GCFC2P16383 781 aaKnown RBP13.98□□□□□ -0.17
CHD4-211ENST00000544484 EIF2AK2P19525 551 aaKnown RBP13.98□□□□□ -0.17
CHD4-211ENST00000544484 ATP11AP98196 1134 aa13.98□□□□□ -0.17
CHD4-211ENST00000544484 GUCY2DQ02846 1103 aa13.98□□□□□ -0.17
CHD4-211ENST00000544484 TBC1D10CQ8IV04 446 aa13.98□□□□□ -0.17
CHD4-211ENST00000544484 FKBP3Q00688 224 aaKnown RBP13.98□□□□□ -0.17
CHD4-211ENST00000544484 RASSF4Q9H2L5 321 aa13.98□□□□□ -0.17
CHD4-211ENST00000544484 PNMA2Q9UL42 364 aa13.98□□□□□ -0.17
CHD4-211ENST00000544484 RNF8O76064 485 aa13.98□□□□□ -0.17
CHD4-211ENST00000544484 MTERF2Q49AM1 385 aa13.98□□□□□ -0.17
CHD4-211ENST00000544484 ZNF526Q8TF50 670 aaPredicted RBP13.98□□□□□ -0.17
CHD4-211ENST00000544484 WDR11Q9BZH6 1224 aa13.98□□□□□ -0.17
CHD4-211ENST00000544484 SRPRBQ9Y5M8 271 aaKnown RBP13.98□□□□□ -0.17
CHD4-211ENST00000544484 PTCH1Q13635 1447 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 AFPP02771 609 aaKnown RBP13.97□□□□□ -0.17
CHD4-211ENST00000544484 EEF1GP26641 437 aaKnown RBP13.97□□□□□ -0.17
CHD4-211ENST00000544484 ZNF772Q68DY9 489 aaPredicted RBP13.97□□□□□ -0.17
CHD4-211ENST00000544484 NME8Q8N427 588 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 RILPQ96NA2 401 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 ZCCHC11Q5TAX3 1644 aaKnown RBP13.97□□□□□ -0.17
CHD4-211ENST00000544484 MAP3K4Q9Y6R4 1608 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 PREX2Q70Z35 1606 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 EFCAB8A8MWE9 144 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 RPS6KA4O75676 772 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 ZMYND10O75800 440 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 NPR1P16066 1061 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 USP14P54578 494 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 OSTNP61366 133 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 ITKQ08881 620 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 CELF1Q92879 486 aaKnown RBP13.97□□□□□ -0.17
CHD4-211ENST00000544484 NACC1Q96RE7 527 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 MFAP3P55082 362 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 CCDC62Q6P9F0 684 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHD4-211ENST00000544484 MINPP1Q9UNW1 487 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 GH2P01242 217 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 POLR2BP30876 1174 aaKnown RBP13.97□□□□□ -0.17
CHD4-211ENST00000544484 BFSP1Q12934 665 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 SUPT20HL1Q3ZLR7 823 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 PHLDB2Q86SQ0 1253 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 FAM133AQ8N9E0 248 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 SLC44A5Q8NCS7 719 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 ACRBPQ8NEB7 543 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 FAM193BQ96PV7 902 aaPredicted RBP13.97□□□□□ -0.17
CHD4-211ENST00000544484 MYO1FO00160 1098 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 IKBKBO14920 756 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 NMT2O60551 498 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 BUB1BO60566 1050 aaPredicted RBP13.97□□□□□ -0.17
CHD4-211ENST00000544484 MAN2A1Q16706 1144 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 EMILIN3Q9NT22 766 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 NEDD4P46934 1319 aa13.97□□□□□ -0.17
CHD4-211ENST00000544484 CTTNQ14247 550 aaKnown RBP13.96□□□□□ -0.17
CHD4-211ENST00000544484 NKX1-1Q15270 411 aaPredicted RBP13.96□□□□□ -0.17
CHD4-211ENST00000544484 PAGE5Q96GU1 130 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 COA1Q9GZY4 146 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 NUB1Q9Y5A7 615 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 ADGRL3Q9HAR2 1447 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 THAP12O43422 761 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 PLA2G4BP0C869 781 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 CXCR5P32302 372 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 TOB2Q14106 344 aaPredicted RBP13.96□□□□□ -0.17
CHD4-211ENST00000544484 ANKRD20A3Q5VUR7 823 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 TTBK2Q6IQ55 1244 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.96□□□□□ -0.17
CHD4-211ENST00000544484 PSDA5PKW4 1024 aaPredicted RBP13.96□□□□□ -0.17
CHD4-211ENST00000544484 GNGT1P63211 74 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 CLEC4GQ6UXB4 293 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 CCDC13Q8IYE1 715 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 ACCSQ96QU6 501 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 SFI1A8K8P3 1242 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 GFPT2O94808 682 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 ATP1A3P13637 1013 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 TFAMQ00059 246 aaKnown RBP13.96□□□□□ -0.17
CHD4-211ENST00000544484 KIF22Q14807 665 aa13.96□□□□□ -0.17
CHD4-211ENST00000544484 ABCC3O15438 1527 aa13.96□□□□□ -0.18
CHD4-211ENST00000544484 SOWAHDA6NJG2 315 aa13.96□□□□□ -0.18
CHD4-211ENST00000544484 GAP43P17677 238 aa13.96□□□□□ -0.18
CHD4-211ENST00000544484 SAT1P21673 171 aa13.96□□□□□ -0.18
CHD4-211ENST00000544484 TFDP1Q14186 410 aa13.96□□□□□ -0.18
CHD4-211ENST00000544484 CYB5R4Q7L1T6 521 aa13.96□□□□□ -0.18
CHD4-211ENST00000544484 ZBTB33Q86T24 672 aa13.96□□□□□ -0.18
CHD4-211ENST00000544484 GRK7Q8WTQ7 553 aa13.96□□□□□ -0.18
CHD4-211ENST00000544484 STK17AQ9UEE5 414 aa13.96□□□□□ -0.18
CHD4-211ENST00000544484 DDIT3P35638 169 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 PPP2R5AQ15172 486 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 TBC1D9BQ66K14 1250 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 ZNF341Q9BYN7 854 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 CD2APQ9Y5K6 639 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 GOLGA8SH3BPF8 625 aa13.95□□□□□ -0.18
CHD4-211ENST00000544484 CASP1P29466 404 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms