RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 HNRNPCL2B2RXH8 293 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 H0YIN7 160 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 HNRNPCL1O60812 293 aaKnown RBP16.75■□□□□ 0.27
CHD4-210ENST00000544040 HSPD1P10809 573 aaKnown RBP16.75■□□□□ 0.27
CHD4-210ENST00000544040 HABP4Q5JVS0 413 aaKnown RBP16.75■□□□□ 0.27
CHD4-210ENST00000544040 HIBCHQ6NVY1 386 aaPredicted RBP16.75■□□□□ 0.27
CHD4-210ENST00000544040 CHURC1Q8WUH1 139 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 TM6SF1Q9BZW5 370 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 TXLNGQ9NUQ3 528 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 ADCY9O60503 1353 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 KRT10P13645 584 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 RNASELQ05823 741 aaKnown RBP16.75■□□□□ 0.27
CHD4-210ENST00000544040 DEPDC1BQ8WUY9 529 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 SLC52A2Q9HAB3 445 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 BCAMP50895 628 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 DPCR1Q3MIW9 517 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 FBXO11Q86XK2 927 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 RASGRP4Q8TDF6 673 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 PARD6BQ9BYG5 372 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 SEPT9Q9UHD8 586 aaPredicted RBP16.75■□□□□ 0.27
CHD4-210ENST00000544040 SUFUQ9UMX1 484 aa16.75■□□□□ 0.27
CHD4-210ENST00000544040 TRIM37O94972 964 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 LMNB2Q03252 620 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 PABPC4Q13310 644 aaKnown RBP eCLIP16.74■□□□□ 0.271e-9■■■□□ 18.4
CHD4-210ENST00000544040 ZSWIM6Q9HCJ5 1215 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 KCNG1Q9UIX4 513 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 GFPT2O94808 682 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 NR2F2P24468 414 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 GRAMD1BQ3KR37 738 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 MFSD14BQ5SR56 506 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 TBC1D1Q86TI0 1168 aaPredicted RBP16.74■□□□□ 0.27
CHD4-210ENST00000544040 EXT2Q93063 718 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 TESK2Q96S53 571 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 PRAG1Q86YV5 1406 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 SRGAP2BP0DMP2 458 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 CDC25BP30305 580 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 RTEL1Q9NZ71 1219 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 SUCLA2Q9P2R7 463 aaPredicted RBP16.74■□□□□ 0.27
CHD4-210ENST00000544040 SPDYE1Q8NFV5 336 aaPredicted RBP16.74■□□□□ 0.27
CHD4-210ENST00000544040 NT5C1BQ96P26 610 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 SPTLC3Q9NUV7 552 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 PIK3C2GO75747 1445 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 TLR3O15455 904 aaKnown RBP16.74■□□□□ 0.27
CHD4-210ENST00000544040 NPR1P16066 1061 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 THOC5Q13769 683 aaKnown RBP16.74■□□□□ 0.27
CHD4-210ENST00000544040 NUDCD3Q8IVD9 361 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 EFHD1Q9BUP0 239 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 ANGPTL2Q9UKU9 493 aa16.74■□□□□ 0.27
CHD4-210ENST00000544040 EIF4E1BA6NMX2 242 aaKnown RBP16.73■□□□□ 0.27
CHD4-210ENST00000544040 EAPPQ56P03 285 aaPredicted RBP16.73■□□□□ 0.27
CHD4-210ENST00000544040 CAPN11Q9UMQ6 739 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 PACSIN2Q9UNF0 486 aaPredicted RBP16.73■□□□□ 0.27
CHD4-210ENST00000544040 PCDHA5Q9Y5H7 936 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 SYF2O95926 243 aaKnown RBP16.73■□□□□ 0.27
CHD4-210ENST00000544040 LONP1P36776 959 aaKnown RBP16.73■□□□□ 0.27
CHD4-210ENST00000544040 NCAPG2Q86XI2 1143 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 KCTD6Q8NC69 237 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 ALKBH8Q96BT7 664 aaKnown RBP16.73■□□□□ 0.27
CHD4-210ENST00000544040 SLC38A10Q9HBR0 1119 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 PGRMC1O00264 195 aaKnown RBP16.73■□□□□ 0.27
CHD4-210ENST00000544040 MCF2LO15068 1137 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 GADL1Q6ZQY3 521 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 TRIM42Q8IWZ5 723 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 TRIML2Q8N7C3 387 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 FBXL13Q8NEE6 735 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 DYDC2Q96IM9 177 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 NBPF3Q9H094 633 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 TLK1Q9UKI8 766 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 MRFAP1Q9Y605 127 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 A0A087WUV0 522 aaPredicted RBP16.73■□□□□ 0.27
CHD4-210ENST00000544040 HNRNPDLO14979 420 aaKnown RBP16.73■□□□□ 0.27
CHD4-210ENST00000544040 ESRRAP11474 423 aaPredicted RBP16.73■□□□□ 0.27
CHD4-210ENST00000544040 PDIA3P30101 505 aaKnown RBP16.73■□□□□ 0.27
CHD4-210ENST00000544040 FAM149B1Q96BN6 582 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 POLR3CQ9BUI4 534 aaPredicted RBP16.73■□□□□ 0.27
CHD4-210ENST00000544040 TRAIPQ9BWF2 469 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 MIS12Q9H081 205 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 CCDC87Q9NVE4 849 aa16.73■□□□□ 0.27
CHD4-210ENST00000544040 DENND4BO75064 1496 aaPredicted RBP16.73■□□□□ 0.27
CHD4-210ENST00000544040 AFPP02771 609 aaKnown RBP16.73■□□□□ 0.27
CHD4-210ENST00000544040 MRPL11Q9Y3B7 192 aaKnown RBP16.73■□□□□ 0.27
CHD4-210ENST00000544040 SKIP12755 728 aa16.72■□□□□ 0.27
CHD4-210ENST00000544040 IL13P35225 146 aa16.72■□□□□ 0.27
CHD4-210ENST00000544040 CCDC124Q96CT7 223 aaKnown RBP16.72■□□□□ 0.27
CHD4-210ENST00000544040 TADA3O75528 432 aa16.72■□□□□ 0.27
CHD4-210ENST00000544040 PCGF5Q86SE9 256 aa16.72■□□□□ 0.27
CHD4-210ENST00000544040 EIF2AQ9BY44 585 aaKnown RBP16.72■□□□□ 0.27
CHD4-210ENST00000544040 NEURL1BA8MQ27 555 aa16.72■□□□□ 0.27
CHD4-210ENST00000544040 CTSWP56202 376 aa16.72■□□□□ 0.27
CHD4-210ENST00000544040 C10orf76Q5T2E6 689 aa16.72■□□□□ 0.27
CHD4-210ENST00000544040 ANGPTL8Q6UXH0 198 aa16.72■□□□□ 0.27
CHD4-210ENST00000544040 CALN1Q9BXU9 219 aa16.72■□□□□ 0.27
CHD4-210ENST00000544040 EXOC1LA0A1B0GW35 172 aa16.72■□□□□ 0.27
CHD4-210ENST00000544040 CLCN6P51797 869 aa16.72■□□□□ 0.27
CHD4-210ENST00000544040 NOC2LQ9Y3T9 749 aaKnown RBP16.72■□□□□ 0.27
CHD4-210ENST00000544040 FGAP02671 866 aa16.72■□□□□ 0.27
CHD4-210ENST00000544040 NR1D1P20393 614 aa16.72■□□□□ 0.27
CHD4-210ENST00000544040 DNAJC10Q8IXB1 793 aa16.72■□□□□ 0.27
CHD4-210ENST00000544040 NHEJ1Q9H9Q4 299 aaPredicted RBP16.72■□□□□ 0.27
CHD4-210ENST00000544040 MED23Q9ULK4 1368 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms