RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 LDHAL6AQ6ZMR3 332 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 MAEAQ7L5Y9 396 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 AXIN2Q9Y2T1 843 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 RGPD8O14715 1765 aaPredicted RBP13.94□□□□□ -0.18
SMG8-202ENST00000543872 HGSO14964 777 aaPredicted RBP13.94□□□□□ -0.18
SMG8-202ENST00000543872 TOM1L2Q6ZVM7 507 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 MREGQ8N565 214 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 MIGA1Q8NAN2 632 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 HELBQ8NG08 1087 aaPredicted RBP13.94□□□□□ -0.18
SMG8-202ENST00000543872 AGAP11Q8TF27 550 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.94□□□□□ -0.18
SMG8-202ENST00000543872 PHF20Q9BVI0 1012 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 AP1M1Q9BXS5 423 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 TANGO6Q9C0B7 1094 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 CNNM1Q9NRU3 951 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 PLAGL2Q9UPG8 496 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 NBPF26B4DH59 902 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 SMIM22K7EJ46 135 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 FLT3P36888 993 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 HSPA9P38646 679 aaKnown RBP13.94□□□□□ -0.18
SMG8-202ENST00000543872 PHKA1P46020 1223 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 PDE4DQ08499 809 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 TRAF1Q13077 416 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 IFIT5Q13325 482 aaKnown RBP13.94□□□□□ -0.18
SMG8-202ENST00000543872 UAP1Q16222 522 aaPredicted RBP13.94□□□□□ -0.18
SMG8-202ENST00000543872 NBPF15Q8N660 670 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 MAB21L3Q8N8X9 362 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 TRIM31Q9BZY9 425 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 PLCB1Q9NQ66 1216 aa13.94□□□□□ -0.18
SMG8-202ENST00000543872 PPIP5K2O43314 1243 aa13.93□□□□□ -0.18
SMG8-202ENST00000543872 DNAJC8O75937 253 aaPredicted RBP13.93□□□□□ -0.18
SMG8-202ENST00000543872 GCP02774 474 aa13.93□□□□□ -0.18
SMG8-202ENST00000543872 UBA7P41226 1012 aa13.93□□□□□ -0.18
SMG8-202ENST00000543872 TNNC1P63316 161 aa13.93□□□□□ -0.18
SMG8-202ENST00000543872 LACTB2Q53H82 288 aaPredicted RBP13.93□□□□□ -0.18
SMG8-202ENST00000543872 ESCO1Q5FWF5 840 aa13.93□□□□□ -0.18
SMG8-202ENST00000543872 TAF4BQ92750 862 aa13.93□□□□□ -0.18
SMG8-202ENST00000543872 ELAC2Q9BQ52 826 aaKnown RBP13.93□□□□□ -0.18
SMG8-202ENST00000543872 GOLPH3Q9H4A6 298 aa13.93□□□□□ -0.18
SMG8-202ENST00000543872 STK38LQ9Y2H1 464 aa13.93□□□□□ -0.18
SMG8-202ENST00000543872 KCNK3O14649 394 aa13.93□□□□□ -0.18
SMG8-202ENST00000543872 DRD4P21917 467 aa13.93□□□□□ -0.18
SMG8-202ENST00000543872 UBE3CQ15386 1083 aa13.93□□□□□ -0.18
SMG8-202ENST00000543872 SYNE4Q8N205 404 aa13.93□□□□□ -0.18
SMG8-202ENST00000543872 KCNH5Q8NCM2 988 aa13.93□□□□□ -0.18
SMG8-202ENST00000543872 PRCCQ92733 491 aaPredicted RBP13.93□□□□□ -0.18
SMG8-202ENST00000543872 CCDC47Q96A33 483 aaKnown RBP13.93□□□□□ -0.18
SMG8-202ENST00000543872 LRRC45Q96CN5 670 aa13.93□□□□□ -0.18
SMG8-202ENST00000543872 RNF26Q9BY78 433 aaPredicted RBP13.93□□□□□ -0.18
SMG8-202ENST00000543872 TOPAZ1Q8N9V7 1692 aa13.93□□□□□ -0.18
SMG8-202ENST00000543872 F8W031 263 aaPredicted RBP13.92□□□□□ -0.18
SMG8-202ENST00000543872 ADAMTS3O15072 1205 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 CEP104O60308 925 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 ICA1Q05084 483 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 ANKS4BQ8N8V4 417 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 P2RX5Q93086 422 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 NLRP3Q96P20 1036 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 KDM4CQ9H3R0 1056 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 LRRC4CQ9HCJ2 640 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 BATF3Q9NR55 127 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.92□□□□□ -0.18
SMG8-202ENST00000543872 VIMP08670 466 aaKnown RBP13.92□□□□□ -0.18
SMG8-202ENST00000543872 ZC3H6P61129 1189 aaKnown RBP13.92□□□□□ -0.18
SMG8-202ENST00000543872 KCNV2Q8TDN2 545 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 CHMP6Q96FZ7 201 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 TNKSO95271 1327 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 PYGLP06737 847 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 FCER1AP12319 257 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 CEBPAP49715 358 aaPredicted RBP13.92□□□□□ -0.18
SMG8-202ENST00000543872 MIIPQ5JXC2 388 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 TMTC2Q8N394 836 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 CCDC155Q8N6L0 562 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 C3orf20Q8ND61 904 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 RASGRP4Q8TDF6 673 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 NEUROG2Q9H2A3 272 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 DPH5Q9H2P9 285 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 NOP53Q9NZM5 478 aaKnown RBP13.92□□□□□ -0.18
SMG8-202ENST00000543872 PNMA2Q9UL42 364 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 G3BP2Q9UN86 482 aaKnown RBP13.92□□□□□ -0.18
SMG8-202ENST00000543872 DIP2BQ9P265 1576 aa13.92□□□□□ -0.18
SMG8-202ENST00000543872 MYO5AQ9Y4I1 1855 aaKnown RBP13.91□□□□□ -0.18
SMG8-202ENST00000543872 VEGFAP15692 232 aaPredicted RBP13.91□□□□□ -0.18
SMG8-202ENST00000543872 IFNAR2P48551 515 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 ASIC1P78348 528 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 STK4Q13043 487 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 SPICE1Q8N0Z3 855 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 ZNF570Q96NI8 536 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 GSG1L2A8MUP6 293 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 SNAP23O00161 211 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 ORC4O43929 436 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 KCNA6P17658 529 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 CABP4P57796 275 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 BIRC3Q13489 604 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 TBC1D25Q3MII6 688 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 CDCA2Q69YH5 1023 aaPredicted RBP13.91□□□□□ -0.18
SMG8-202ENST00000543872 FAM114A1Q8IWE2 563 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 KIF2BQ8N4N8 673 aa13.91□□□□□ -0.18
SMG8-202ENST00000543872 XPO6Q96QU8 1125 aaKnown RBP13.91□□□□□ -0.18
SMG8-202ENST00000543872 DDX47Q9H0S4 455 aaKnown RBP13.91□□□□□ -0.18
SMG8-202ENST00000543872 CD2APQ9Y5K6 639 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms