RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 MEA1Q16626 185 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 TUBB8Q3ZCM7 444 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 CCDC40Q4G0X9 1142 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 ODF2Q5BJF6 829 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 CEP85LQ5SZL2 805 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 CCDC121Q6ZUS5 278 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 AKT1S1Q96B36 256 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 SCLT1Q96NL6 688 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 CCT8L2Q96SF2 557 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 EPN3Q9H201 632 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 KLC4Q9NSK0 619 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 GOLGA6L10A6NI86 522 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 CHUKO15111 745 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 PPP1R37O75864 691 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 GLI1P08151 1106 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 VEGFAP15692 232 aaPredicted RBP5.87□□□□□ -1.47
KDM3B-209ENST00000542866 FNTAP49354 379 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 KIF11P52732 1056 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 PDE4DQ08499 809 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 TDRD12Q587J7 1177 aaKnown RBP5.87□□□□□ -1.47
KDM3B-209ENST00000542866 DALRD3Q5D0E6 543 aaKnown RBP5.87□□□□□ -1.47
KDM3B-209ENST00000542866 SOGA3Q5TF21 947 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 RRAGAQ7L523 313 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 NLRP14Q86W24 1093 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 IQCA1Q86XH1 822 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 DZIP1Q86YF9 867 aaKnown RBP5.87□□□□□ -1.47
KDM3B-209ENST00000542866 ENAHQ8N8S7 591 aaPredicted RBP5.87□□□□□ -1.47
KDM3B-209ENST00000542866 SUPT20HQ8NEM7 779 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 CCDC47Q96A33 483 aaKnown RBP5.87□□□□□ -1.47
KDM3B-209ENST00000542866 ZSCAN10Q96SZ4 725 aaPredicted RBP5.87□□□□□ -1.47
KDM3B-209ENST00000542866 SH2D4AQ9H788 454 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 PIM2Q9P1W9 311 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 ZNF233A6NK53 670 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 RASSF10A6NK89 507 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 BACH1O14867 736 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 ADAMTS3O15072 1205 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 ECM2O94769 699 aaPredicted RBP5.87□□□□□ -1.47
KDM3B-209ENST00000542866 FSBPO95073 299 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 EPB41P11171 864 aaKnown RBP5.87□□□□□ -1.47
KDM3B-209ENST00000542866 GNAT2P19087 354 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 BCAMP50895 628 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 CHRNDQ07001 517 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 SF3A3Q12874 501 aaKnown RBP eCLIP5.87□□□□□ -1.472e-6■■■□□ 18.2
KDM3B-209ENST00000542866 ANKRD40Q6AI12 368 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 DTHD1Q6ZMT9 781 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 SPATS2Q86XZ4 545 aaKnown RBP5.87□□□□□ -1.47
KDM3B-209ENST00000542866 KLHL7Q8IXQ5 586 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 LARGE2Q8N3Y3 721 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 ZKSCAN4Q969J2 545 aaPredicted RBP5.87□□□□□ -1.47
KDM3B-209ENST00000542866 KRT12Q99456 494 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 PLA2G12BQ9BX93 195 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 TANGO6Q9C0B7 1094 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 DISC1Q9NRI5 854 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 DONSONQ9NYP3 566 aa5.87□□□□□ -1.47
KDM3B-209ENST00000542866 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.87□□□□□ -1.47
KDM3B-209ENST00000542866 ARFGEF2Q9Y6D5 1785 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 NKRFO15226 690 aaKnown RBP eCLIP5.86□□□□□ -1.47
KDM3B-209ENST00000542866 SCP2P22307 547 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 ARID4AP29374 1257 aaPredicted RBP5.86□□□□□ -1.47
KDM3B-209ENST00000542866 CHRNA5P30532 468 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 HIBADHP31937 336 aaKnown RBP5.86□□□□□ -1.47
KDM3B-209ENST00000542866 ASIC1P78348 528 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 PAK2Q13177 524 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 NEDD9Q14511 834 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 E2F5Q15329 346 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 SF3B3Q15393 1217 aaKnown RBP5.86□□□□□ -1.47
KDM3B-209ENST00000542866 SEC23AQ15436 765 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 PTGISQ16647 500 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 KCTD19Q17RG1 926 aaPredicted RBP5.86□□□□□ -1.47
KDM3B-209ENST00000542866 SLC4A8Q2Y0W8 1093 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 CFAP221Q4G0U5 840 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 CACNA2D4Q7Z3S7 1137 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 RETREG2Q8NC44 543 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 MYCBPAPQ8TBZ2 947 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 N4BP2L2Q92802 583 aaPredicted RBP5.86□□□□□ -1.47
KDM3B-209ENST00000542866 CELF1Q92879 486 aaKnown RBP5.86□□□□□ -1.47
KDM3B-209ENST00000542866 P2RX5Q93086 422 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 HPS3Q969F9 1004 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 ARHGAP20Q9P2F6 1191 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 ODF2LQ9ULJ1 636 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 BAZ2BQ9UIF8 2168 aaKnown RBP5.86□□□□□ -1.47
KDM3B-209ENST00000542866 SPEF2Q9C093 1822 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 FRMD3A2A2Y4 597 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 TTC36A6NLP5 189 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 FTCDO95954 541 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 ATP2B4P23634 1241 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 LONP1P36776 959 aaKnown RBP5.86□□□□□ -1.47
KDM3B-209ENST00000542866 MDH1P40925 334 aaKnown RBP5.86□□□□□ -1.47
KDM3B-209ENST00000542866 GFPT1Q06210 699 aaPredicted RBP5.86□□□□□ -1.47
KDM3B-209ENST00000542866 PPP2R5BQ15173 497 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 TRADDQ15628 312 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 TTI2Q6NXR4 508 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 KDM7AQ6ZMT4 941 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 ZNF662Q6ZS27 426 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 FAM114A1Q8IWE2 563 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 CCDC13Q8IYE1 715 aa5.86□□□□□ -1.47
KDM3B-209ENST00000542866 SRBD1Q8N5C6 995 aaKnown RBP5.86□□□□□ -1.47
KDM3B-209ENST00000542866 PROCA1Q8NCQ7 364 aaPredicted RBP5.86□□□□□ -1.47
KDM3B-209ENST00000542866 GPKOWQ92917 476 aaPredicted RBP eCLIP5.86□□□□□ -1.47
KDM3B-209ENST00000542866 CAVIN3Q969G5 261 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms