RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 HDXQ7Z353 690 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 KRT25Q7Z3Z0 450 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 CTAGE6Q86UF2 777 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 NBPF5PQ86XG9 351 aaPredicted RBP5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 DZIP1Q86YF9 867 aaKnown RBP5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 CERS3Q8IU89 383 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 CTAGE4Q8IX94 777 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 ZNF687Q8N1G0 1237 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 P2RX5Q93086 422 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 EXOC4Q96A65 974 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 NUP58Q9BVL2 599 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 TRIM9Q9C026 710 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 TMEM134Q9H6X4 195 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 HMX1Q9NP08 348 aaPredicted RBP5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 ZCCHC17Q9NP64 241 aaKnown RBP5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 PLA2G2EQ9NZK7 142 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 SRP68Q9UHB9 627 aaKnown RBP5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 MYO6Q9UM54 1294 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 MAPK8IP1Q9UQF2 711 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 LEMD3Q9Y2U8 911 aa5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 LUC7L2Q9Y383 392 aaKnown RBP5.81□□□□□ -1.48
ATPAF1-212ENST00000542495 ESYT2A0FGR8 921 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 EIF3CLB5ME19 914 aaKnown RBP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 PLSCR1O15162 318 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 POLR3GO15318 223 aaPredicted RBP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 ERLIN1O75477 346 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 BAG3O95817 575 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 TFRCP02786 760 aaKnown RBP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 OR52Z1P0C646 297 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 TSPY3P0CV98 308 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 TSPY8P0CW00 308 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 PLCG1P19174 1290 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 HOXA7P31268 230 aaPredicted RBP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 HNRNPH3P31942 346 aaKnown RBP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 VSNL1P62760 191 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 KRT83P78385 493 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 ST5P78524 1137 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 ZBED6P86452 979 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 GRIK5Q16478 980 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 ARSIQ5FYB1 569 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 MUM1L1Q5H9M0 696 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 MIIPQ5JXC2 388 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 NUDT18Q6ZVK8 323 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 C16orf86Q6ZW13 317 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 HEATR3Q7Z4Q2 680 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 CABP7Q86V35 215 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 CCDC170Q8IYT3 715 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 ZNF444Q8N0Y2 327 aaPredicted RBP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 TXLNBQ8N3L3 684 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 NOA1Q8NC60 698 aaKnown RBP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 NEDD1Q8NHV4 660 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 IQCDQ96DY2 449 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 TRIM47Q96LD4 638 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 PURBQ96QR8 312 aaKnown RBP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 ERGIC2Q96RQ1 377 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 EIF3CQ99613 913 aaKnown RBP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 MMTAG2Q9BU76 263 aaKnown RBP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 RTFDC1Q9BY42 306 aaPredicted RBP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 TRIM34Q9BYJ4 488 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 GBP3Q9H0R5 595 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 ZSWIM4Q9H7M6 989 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 MKNK2Q9HBH9 465 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 SPON1Q9HCB6 807 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 ABCB6Q9NP58 842 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 EXOC1Q9NV70 894 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 CALCOCO1Q9P1Z2 691 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 GPR75-ASB3A0A0A6YYF3 556 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 BICDL2A1A5D9 508 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 CARNS1A5YM72 827 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 B4DLN1 442 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 KLRF2D3W0D1 207 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 LDHCP07864 332 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 USP14P54578 494 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 HNRNPH2P55795 449 aaKnown RBP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 STK4Q13043 487 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 GRAPQ13588 217 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 NONOQ15233 471 aaKnown RBP eCLIP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 TXNRD1Q16881 649 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 ANKRD40Q6AI12 368 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 CENPPQ6IPU0 288 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 CNNM4Q6P4Q7 775 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 FOXR2Q6PJQ5 311 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 SMIM5Q71RC9 77 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 FAM114A1Q8IWE2 563 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 AMOTL1Q8IY63 956 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 CSGALNACT2Q8N6G5 542 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 SLC44A5Q8NCS7 719 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 EHBP1Q8NDI1 1231 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 GRAPLQ8TC17 118 aaPredicted RBP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 TGFBRAP1Q8WUH2 860 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 RPGRIP1Q96KN7 1286 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 MTMR9Q96QG7 549 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 TUBGCP2Q9BSJ2 902 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 PPP1R12CQ9BZL4 782 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 ZNF287Q9HBT7 754 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 AGPAT5Q9NUQ2 364 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 MAGEC2Q9UBF1 373 aaPredicted RBP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 PPP1R1BQ9UD71 204 aaPredicted RBP5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 TRIM10Q9UDY6 481 aa5.8□□□□□ -1.48
ATPAF1-212ENST00000542495 ADAM21Q9UKJ8 722 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms