RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 PPP2R2CQ9Y2T4 447 aa16.43■□□□□ 0.22
SPOCK3-226ENST00000541354 SYNRGQ9UMZ2 1314 aa16.42■□□□□ 0.22
SPOCK3-226ENST00000541354 ICAM1P05362 532 aa16.42■□□□□ 0.22
SPOCK3-226ENST00000541354 TMEM119Q4V9L6 283 aa16.42■□□□□ 0.22
SPOCK3-226ENST00000541354 NAALADL2Q58DX5 795 aa16.42■□□□□ 0.22
SPOCK3-226ENST00000541354 OGFRQ9NZT2 677 aa16.42■□□□□ 0.22
SPOCK3-226ENST00000541354 MYPNQ86TC9 1320 aa16.42■□□□□ 0.22
SPOCK3-226ENST00000541354 MUTP22033 750 aa16.42■□□□□ 0.22
SPOCK3-226ENST00000541354 ARHGAP4P98171 946 aa16.42■□□□□ 0.22
SPOCK3-226ENST00000541354 NAA30Q147X3 362 aaPredicted RBP16.42■□□□□ 0.22
SPOCK3-226ENST00000541354 UBE2SQ16763 222 aa16.42■□□□□ 0.22
SPOCK3-226ENST00000541354 TBC1D10BQ4KMP7 808 aaPredicted RBP16.42■□□□□ 0.22
SPOCK3-226ENST00000541354 MCF2L2Q86YR7 1114 aa16.42■□□□□ 0.22
SPOCK3-226ENST00000541354 NUP88Q99567 741 aaPredicted RBP16.42■□□□□ 0.22
SPOCK3-226ENST00000541354 SLF1Q9BQI6 1058 aa16.42■□□□□ 0.22
SPOCK3-226ENST00000541354 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.42■□□□□ 0.22
SPOCK3-226ENST00000541354 SHTN1A0MZ66 631 aa16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 RHOBTB3O94955 611 aa16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 AFMP43652 599 aa16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 OAZ1P54368 228 aa16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 KIAA1755Q5JYT7 1200 aa16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 KRT79Q5XKE5 535 aa16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 ARHGAP27Q6ZUM4 889 aa16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 MIGA2Q7L4E1 593 aa16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 SAMD7Q7Z3H4 446 aa16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 MTRQ99707 1265 aa16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 ADARB2Q9NS39 739 aaKnown RBP16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 FAM53CQ9NYF3 392 aa16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 LIMA1Q9UHB6 759 aaKnown RBP16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 RWDD2AQ9UIY3 292 aa16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 DDX41Q9UJV9 622 aaKnown RBP16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 GCOM1H8Y6P7 765 aaPredicted RBP16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 TDP2O95551 362 aa16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 RPN1P04843 607 aaKnown RBP16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 POLR2MP0CAP2 368 aa16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 NIPA1Q7RTP0 329 aa16.41■□□□□ 0.22
SPOCK3-226ENST00000541354 PVALEFA0A1B0GWK0 134 aa16.4■□□□□ 0.22
SPOCK3-226ENST00000541354 OPLAHO14841 1288 aa16.4■□□□□ 0.22
SPOCK3-226ENST00000541354 SLC37A4O43826 429 aa16.4■□□□□ 0.22
SPOCK3-226ENST00000541354 KARSQ15046 597 aaKnown RBP16.4■□□□□ 0.22
SPOCK3-226ENST00000541354 CCDC51Q96ER9 411 aa16.4■□□□□ 0.22
SPOCK3-226ENST00000541354 MMTAG2Q9BU76 263 aaKnown RBP16.4■□□□□ 0.22
SPOCK3-226ENST00000541354 RAD21O60216 631 aa16.4■□□□□ 0.22
SPOCK3-226ENST00000541354 HSD17B4P51659 736 aa16.4■□□□□ 0.22
SPOCK3-226ENST00000541354 CDAN1Q8IWY9 1227 aa16.4■□□□□ 0.22
SPOCK3-226ENST00000541354 HAS1Q92839 578 aa16.4■□□□□ 0.22
SPOCK3-226ENST00000541354 FRMPD4Q14CM0 1322 aa16.39■□□□□ 0.21
SPOCK3-226ENST00000541354 AKR1B15C9JRZ8 316 aaPredicted RBP16.39■□□□□ 0.21
SPOCK3-226ENST00000541354 EGFRP00533 1210 aa16.39■□□□□ 0.21
SPOCK3-226ENST00000541354 SPAG1Q07617 926 aa16.39■□□□□ 0.21
SPOCK3-226ENST00000541354 NOC3LQ8WTT2 800 aaKnown RBP16.39■□□□□ 0.21
SPOCK3-226ENST00000541354 PLCG1P19174 1290 aa16.39■□□□□ 0.21
SPOCK3-226ENST00000541354 TECP42680 631 aa16.39■□□□□ 0.21
SPOCK3-226ENST00000541354 HAUS3Q68CZ6 603 aa16.39■□□□□ 0.21
SPOCK3-226ENST00000541354 ETNPPLQ8TBG4 499 aa16.39■□□□□ 0.21
SPOCK3-226ENST00000541354 L3MBTL3Q96JM7 780 aaPredicted RBP16.39■□□□□ 0.21
SPOCK3-226ENST00000541354 PICK1Q9NRD5 415 aa16.39■□□□□ 0.21
SPOCK3-226ENST00000541354 DNAI1Q9UI46 699 aa16.39■□□□□ 0.21
SPOCK3-226ENST00000541354 PCDHA12Q9UN75 941 aa16.39■□□□□ 0.21
SPOCK3-226ENST00000541354 H2AFXP16104 143 aaPredicted RBP16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 TXKP42681 527 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 SETQ01105 290 aaPredicted RBP16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 PSMD2Q13200 908 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 STIM1Q13586 685 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 FILIP1LQ4L180 1135 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 ANGEL2Q5VTE6 544 aaKnown RBP16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 RASSF8Q8NHQ8 419 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 ERMNQ8TAM6 284 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 FHDC1Q9C0D6 1143 aaPredicted RBP16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 LOC285556D6RIA3 1793 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 USP17L15C9J2P7 530 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 USP17L13C9JLJ4 530 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 USP17L11C9JVI0 530 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 USP17L18D6R9N7 530 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 USP17L22D6RA61 530 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 USP17L17D6RBQ6 530 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 USP17L19D6RCP7 530 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 USP17L20D6RJB6 530 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 FANCGO15287 622 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 BACE1P56817 501 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 USP17L24Q0WX57 530 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 GRB10Q13322 594 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 TKFCQ3LXA3 575 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 SH3D19Q5HYK7 790 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 USP17L6PQ6QN14 398 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 SV2BQ7L1I2 683 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 ZNF280CQ8ND82 737 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 RBM46Q8TBY0 533 aaKnown RBP16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 CDK5RAP3Q96JB5 506 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 SLC38A10Q9HBR0 1119 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 PPP1R9AQ9ULJ8 1098 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 RPTORQ8N122 1335 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 TEX33O43247 280 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 GOLGA8FQ08AF8 430 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 GOLGA8DPQ0D2H9 430 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 KMT5BQ4FZB7 885 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 NBPF12Q5TAG4 269 aaPredicted RBP16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 XRRA1Q6P2D8 792 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 LDHDQ86WU2 507 aa16.38■□□□□ 0.21
SPOCK3-226ENST00000541354 GIMAP8Q8ND71 665 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms