RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 KIF4BQ2VIQ3 1234 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 FILIP1LQ4L180 1135 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 ZBTB9Q96C00 473 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 REXO2Q9Y3B8 237 aaKnown RBP19.18■□□□□ 0.66
SPIDR-227ENST00000541342 MYH7BA7E2Y1 1941 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 EGFRP00533 1210 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 ECE1P42892 770 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 AMPD2Q01433 879 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 TXLNBQ8N3L3 684 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 PDE11AQ9HCR9 933 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 TAB2Q9NYJ8 693 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.18■□□□□ 0.66
SPIDR-227ENST00000541342 RWDD2AQ9UIY3 292 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 L1RE1Q9UN81 338 aa19.18■□□□□ 0.66
SPIDR-227ENST00000541342 COPB1P53618 953 aaKnown RBP19.17■□□□□ 0.66
SPIDR-227ENST00000541342 CDC37Q16543 378 aaPredicted RBP19.17■□□□□ 0.66
SPIDR-227ENST00000541342 TCP11X2Q5H9J9 407 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 MIGA2Q7L4E1 593 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 IQUBQ8NA54 791 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 ABCB6Q9NP58 842 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 N4BP3O15049 544 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 SNAP25P60880 206 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 VSNL1P62760 191 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 KIAA1755Q5JYT7 1200 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 RRAGBQ5VZM2 374 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 FAM83AQ86UY5 434 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 TMTC1Q8IUR5 882 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 CD2APQ9Y5K6 639 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 N4BP1O75113 896 aaKnown RBP19.17■□□□□ 0.66
SPIDR-227ENST00000541342 OR52Z1P0C646 297 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 PTGER2P43116 358 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 RASSF7Q02833 373 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 MUM1L1Q5H9M0 696 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 POTEDQ86YR6 584 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 IRF2BP1Q8IU81 584 aa19.17■□□□□ 0.66
SPIDR-227ENST00000541342 RAD51AP2Q09MP3 1159 aa19.16■□□□□ 0.66
SPIDR-227ENST00000541342 MCM6Q14566 821 aa19.16■□□□□ 0.66
SPIDR-227ENST00000541342 NOA1Q8NC60 698 aaKnown RBP19.16■□□□□ 0.66
SPIDR-227ENST00000541342 ACER1Q8TDN7 264 aa19.16■□□□□ 0.66
SPIDR-227ENST00000541342 CHP1Q99653 195 aa19.16■□□□□ 0.66
SPIDR-227ENST00000541342 TRIM10Q9UDY6 481 aa19.16■□□□□ 0.66
SPIDR-227ENST00000541342 SPICE1Q8N0Z3 855 aa19.16■□□□□ 0.66
SPIDR-227ENST00000541342 CUL5Q93034 780 aa19.16■□□□□ 0.66
SPIDR-227ENST00000541342 NAPGQ99747 312 aaPredicted RBP19.16■□□□□ 0.66
SPIDR-227ENST00000541342 ZBTB21Q9ULJ3 1066 aa19.16■□□□□ 0.66
SPIDR-227ENST00000541342 GDAQ9Y2T3 454 aa19.16■□□□□ 0.66
SPIDR-227ENST00000541342 RHOXF2BP0C7M4 288 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 PAK1Q13153 545 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 NELFBQ8WX92 580 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 SLF1Q9BQI6 1058 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 RHOXF2Q9BQY4 288 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 KCNJ18B7U540 433 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 KCNJ12Q14500 433 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 NAALADL2Q58DX5 795 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 LRRC15Q8TF66 581 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 EXOC4Q96A65 974 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 TRERF1Q96PN7 1200 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 PSTPIP2Q9H939 334 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 DISC1Q9NRI5 854 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 MAPK8IP1Q9UQF2 711 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 GTPBP6O43824 516 aaPredicted RBP19.15■□□□□ 0.66
SPIDR-227ENST00000541342 SLC37A4O43826 429 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 TBC1D12O60347 775 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 TDP2O95551 362 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 BMP3P12645 472 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 TUBB2AQ13885 445 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 CYP26C1Q6V0L0 522 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 TUBB2BQ9BVA1 445 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 PCDHA1Q9Y5I3 950 aa19.15■□□□□ 0.66
SPIDR-227ENST00000541342 TNNI2P48788 182 aa19.14■□□□□ 0.65
SPIDR-227ENST00000541342 TNIP1Q15025 636 aa19.14■□□□□ 0.65
SPIDR-227ENST00000541342 PSD3Q9NYI0 1048 aa19.14■□□□□ 0.65
SPIDR-227ENST00000541342 PRCPP42785 496 aa19.14■□□□□ 0.65
SPIDR-227ENST00000541342 ZNF280AP59817 542 aaPredicted RBP19.14■□□□□ 0.65
SPIDR-227ENST00000541342 ZNF658Q5TYW1 1059 aaPredicted RBP19.14■□□□□ 0.65
SPIDR-227ENST00000541342 NCAPH2Q6IBW4 605 aa19.14■□□□□ 0.65
SPIDR-227ENST00000541342 MTMR9Q96QG7 549 aa19.14■□□□□ 0.65
SPIDR-227ENST00000541342 PYM1Q9BRP8 204 aaKnown RBP19.14■□□□□ 0.65
SPIDR-227ENST00000541342 SMCHD1A6NHR9 2005 aa19.14■□□□□ 0.65
SPIDR-227ENST00000541342 KRT9P35527 623 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 HDXQ7Z353 690 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 NLGN2Q8NFZ4 835 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 CCSER1Q9C0I3 900 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 ATAD5Q96QE3 1844 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 TRIM49BA6NDI0 452 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 USP17L15C9J2P7 530 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 USP17L13C9JLJ4 530 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 USP17L11C9JVI0 530 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 USP17L18D6R9N7 530 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 USP17L22D6RA61 530 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 USP17L17D6RBQ6 530 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 USP17L19D6RCP7 530 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 USP17L20D6RJB6 530 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 TAL1P17542 331 aaPredicted RBP19.13■□□□□ 0.65
SPIDR-227ENST00000541342 MRPL12P52815 198 aaKnown RBP19.13■□□□□ 0.65
SPIDR-227ENST00000541342 PMS1P54277 932 aaKnown RBP19.13■□□□□ 0.65
SPIDR-227ENST00000541342 USP17L24Q0WX57 530 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 ORC2Q13416 577 aaPredicted RBP19.13■□□□□ 0.65
SPIDR-227ENST00000541342 SYDE2Q5VT97 1194 aa19.13■□□□□ 0.65
SPIDR-227ENST00000541342 USP17L6PQ6QN14 398 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms