RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 BCRP11274 1271 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 MRPS25P82663 173 aaKnown RBP14.25□□□□□ -0.13
DNMT1-203ENST00000540357 PWP2Q15269 919 aaKnown RBP14.25□□□□□ -0.13
DNMT1-203ENST00000540357 STMN2Q93045 179 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 ASIC3Q9UHC3 531 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 STK38LQ9Y2H1 464 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 LRRC53A6NM62 1247 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 ZNF185O15231 689 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 FBXW10Q5XX13 1052 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 PARP9Q8IXQ6 854 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 TEX11Q8IYF3 940 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 ISCA1Q9BUE6 129 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 TRIM10Q9UDY6 481 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 CEP83Q9Y592 693 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 GSG1L2A8MUP6 293 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 DESP17661 470 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 EXOC3L4Q17RC7 722 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 PAPD7Q5XG87 772 aaKnown RBP14.25□□□□□ -0.13
DNMT1-203ENST00000540357 TMED8Q6PL24 325 aaPredicted RBP14.25□□□□□ -0.13
DNMT1-203ENST00000540357 EDEM3Q9BZQ6 932 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 DAAM1Q9Y4D1 1078 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 PNPLA7Q6ZV29 1317 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 MDH1P40925 334 aaKnown RBP14.25□□□□□ -0.13
DNMT1-203ENST00000540357 GYG1P46976 350 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 CDKAL1Q5VV42 579 aa14.25□□□□□ -0.13
DNMT1-203ENST00000540357 TAF1DQ9H5J8 278 aaPredicted RBP14.25□□□□□ -0.13
DNMT1-203ENST00000540357 FAM237AA0A1B0GTK4 181 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 FERP16591 822 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 ENAHQ8N8S7 591 aaPredicted RBP14.24□□□□□ -0.13
DNMT1-203ENST00000540357 TCP11Q8WWU5 503 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 IQCGQ9H095 443 aaKnown RBP14.24□□□□□ -0.13
DNMT1-203ENST00000540357 CXorf56Q9H5V9 222 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 GPCPD1Q9NPB8 672 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 RPSAP08865 295 aaKnown RBP14.24□□□□□ -0.13
DNMT1-203ENST00000540357 LMNB1P20700 586 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 PPP2R2AP63151 447 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 HIBCHQ6NVY1 386 aaPredicted RBP14.24□□□□□ -0.13
DNMT1-203ENST00000540357 ZNF473Q8WTR7 871 aaKnown RBP14.24□□□□□ -0.13
DNMT1-203ENST00000540357 KIFAP3Q92845 792 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 CCDC87Q9NVE4 849 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 ATP8A1Q9Y2Q0 1164 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 A0A1W2PQJ5 194 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 CYP27B1O15528 508 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 HNRNPH1P31943 449 aaKnown RBP14.24□□□□□ -0.13
DNMT1-203ENST00000540357 LRIG3Q6UXM1 1119 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 UNC13DQ70J99 1090 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 PROM2Q8N271 834 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 FAM133AQ8N9E0 248 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 SMCR8Q8TEV9 937 aaPredicted RBP14.24□□□□□ -0.13
DNMT1-203ENST00000540357 DNAJC7Q99615 494 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 PLA2G12BQ9BX93 195 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 SH2D4AQ9H788 454 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 PDS5AQ29RF7 1337 aaKnown RBP14.24□□□□□ -0.13
DNMT1-203ENST00000540357 hCG_1984214I3L0E3 225 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 AARSP49588 968 aaKnown RBP eCLIP14.24□□□□□ -0.133e-8■■□□□ 12.6
DNMT1-203ENST00000540357 SARSP49591 514 aaKnown RBP14.24□□□□□ -0.13
DNMT1-203ENST00000540357 USP49Q70CQ1 688 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 ZNF365Q70YC5 407 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 ZNF713Q8N859 430 aaPredicted RBP14.24□□□□□ -0.13
DNMT1-203ENST00000540357 MGARPQ8TDB4 240 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 PSMD1Q99460 953 aa14.24□□□□□ -0.13
DNMT1-203ENST00000540357 PPP4R3AQ6IN85 833 aa14.23□□□□□ -0.13
DNMT1-203ENST00000540357 NEK9Q8TD19 979 aa14.23□□□□□ -0.13
DNMT1-203ENST00000540357 ZNF622Q969S3 477 aaKnown RBP eCLIP14.23□□□□□ -0.133e-7■■□□□ 13.7
DNMT1-203ENST00000540357 SPATS2LQ9NUQ6 558 aaKnown RBP14.23□□□□□ -0.13
DNMT1-203ENST00000540357 CCDC38Q502W7 563 aa14.23□□□□□ -0.13
DNMT1-203ENST00000540357 FMO2Q99518 471 aa14.23□□□□□ -0.13
DNMT1-203ENST00000540357 PCDHA12Q9UN75 941 aa14.23□□□□□ -0.13
DNMT1-203ENST00000540357 DIS3Q9Y2L1 958 aaKnown RBP14.23□□□□□ -0.13
DNMT1-203ENST00000540357 PVALEFA0A1B0GWK0 134 aa14.23□□□□□ -0.13
DNMT1-203ENST00000540357 GCNT3O95395 438 aa14.23□□□□□ -0.13
DNMT1-203ENST00000540357 HSPA6P17066 643 aa14.23□□□□□ -0.13
DNMT1-203ENST00000540357 GUCY1A3Q02108 690 aa14.23□□□□□ -0.13
DNMT1-203ENST00000540357 GRIN1Q05586 938 aa14.23□□□□□ -0.13
DNMT1-203ENST00000540357 ANKRD42Q8N9B4 389 aa14.23□□□□□ -0.13
DNMT1-203ENST00000540357 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.23□□□□□ -0.131e-6■■■■□ 19.7
DNMT1-203ENST00000540357 AGLP35573 1532 aa14.23□□□□□ -0.13
DNMT1-203ENST00000540357 NCK2O43639 380 aa14.23□□□□□ -0.13
DNMT1-203ENST00000540357 GFPT1Q06210 699 aaPredicted RBP14.23□□□□□ -0.13
DNMT1-203ENST00000540357 SF3A3Q12874 501 aaKnown RBP eCLIP14.23□□□□□ -0.133e-6■■■■■ 28.3
DNMT1-203ENST00000540357 TPTE2Q6XPS3 522 aa14.23□□□□□ -0.13
DNMT1-203ENST00000540357 SMC6Q96SB8 1091 aa14.23□□□□□ -0.13
DNMT1-203ENST00000540357 ADAMTS13Q76LX8 1427 aa14.22□□□□□ -0.13
DNMT1-203ENST00000540357 AFPP02771 609 aaKnown RBP14.22□□□□□ -0.13
DNMT1-203ENST00000540357 TRIM28Q13263 835 aaKnown RBP14.22□□□□□ -0.13
DNMT1-203ENST00000540357 PICALMQ13492 652 aa14.22□□□□□ -0.13
DNMT1-203ENST00000540357 CCT8L2Q96SF2 557 aa14.22□□□□□ -0.13
DNMT1-203ENST00000540357 EYA3Q99504 573 aa14.22□□□□□ -0.13
DNMT1-203ENST00000540357 JAG2Q9Y219 1238 aa14.22□□□□□ -0.13
DNMT1-203ENST00000540357 PASKQ96RG2 1323 aa14.22□□□□□ -0.13
DNMT1-203ENST00000540357 DIP2AQ14689 1571 aa14.22□□□□□ -0.13
DNMT1-203ENST00000540357 SART1O43290 800 aaKnown RBP14.22□□□□□ -0.13
DNMT1-203ENST00000540357 GAS8O95995 478 aa14.22□□□□□ -0.13
DNMT1-203ENST00000540357 ABCB4P21439 1286 aa14.22□□□□□ -0.13
DNMT1-203ENST00000540357 DYNLL1P63167 89 aaKnown RBP14.22□□□□□ -0.13
DNMT1-203ENST00000540357 C6orf118Q5T5N4 469 aa14.22□□□□□ -0.13
DNMT1-203ENST00000540357 DDX25Q9UHL0 483 aaKnown RBP14.22□□□□□ -0.13
DNMT1-203ENST00000540357 AXIN2Q9Y2T1 843 aa14.22□□□□□ -0.13
DNMT1-203ENST00000540357 DIP2BQ9P265 1576 aa14.22□□□□□ -0.13
DNMT1-203ENST00000540357 FRMD3A2A2Y4 597 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms