RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.06□□□□□ -1.28
LSAMP-207ENST00000539563 DBNLQ9UJU6 430 aaKnown RBP7.06□□□□□ -1.28
LSAMP-207ENST00000539563 ZNF148Q9UQR1 794 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 JRKLQ9Y4A0 524 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 TYW5A2RUC4 315 aaKnown RBP7.06□□□□□ -1.28
LSAMP-207ENST00000539563 MMP1P03956 469 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 APOA5Q6Q788 366 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 ANKRD42Q8N9B4 389 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 RNF14Q9UBS8 474 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 SLC12A6Q9UHW9 1150 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 ABL1P00519 1130 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 GPR162Q16538 588 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 NLRP10Q86W26 655 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 CCDC170Q8IYT3 715 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 GPT2Q8TD30 523 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 Q9H521 79 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 CPSF2Q9P2I0 782 aaKnown RBP7.06□□□□□ -1.28
LSAMP-207ENST00000539563 GLI2P10070 1586 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 H7C0C1 242 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 TXNDC9O14530 226 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 ATP5OP48047 213 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 BSPRYQ5W0U4 402 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 ZNF772Q68DY9 489 aaPredicted RBP7.06□□□□□ -1.28
LSAMP-207ENST00000539563 CC2D2BQ6DHV5 1058 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 CALR3Q96L12 384 aaKnown RBP7.06□□□□□ -1.28
LSAMP-207ENST00000539563 TTC1Q99614 292 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 SUGCTQ9HAC7 445 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 RWDD2AQ9UIY3 292 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 AKT3Q9Y243 479 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 SRPRBQ9Y5M8 271 aaKnown RBP7.06□□□□□ -1.28
LSAMP-207ENST00000539563 CCDC38Q502W7 563 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 SYDE2Q5VT97 1194 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 PPP4R3CPQ6ZMV5 832 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 DPP9Q86TI2 863 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 FAM186BQ8IYM0 893 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 CCDC127Q96BQ5 260 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 VCX3AQ9NNX9 186 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 SEPT10Q9P0V9 454 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 SERPINB13Q9UIV8 391 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 ASAP1Q9ULH1 1129 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 ATP8B3O60423 1300 aa7.06□□□□□ -1.28
LSAMP-207ENST00000539563 SGK1O00141 431 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 INHBAP08476 426 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 SH3BGRP55822 239 aaPredicted RBP7.05□□□□□ -1.28
LSAMP-207ENST00000539563 NXNQ6DKJ4 435 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 TTBK2Q6IQ55 1244 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 MAGOHBQ96A72 148 aaKnown RBP7.05□□□□□ -1.28
LSAMP-207ENST00000539563 MAN1B1Q9UKM7 699 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 ARHGAP31Q2M1Z3 1444 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 ZNF853P0CG23 659 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 LRRC8CQ8TDW0 803 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 SLC7A3Q8WY07 619 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 SNX25Q9H3E2 840 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 HSPA6P17066 643 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 NR2F2P24468 414 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 MAPK4P31152 587 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 ABI1Q8IZP0 508 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 RABGGTAQ92696 567 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 CAPS2Q9BXY5 557 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 RRAGDQ9NQL2 400 aaPredicted RBP7.05□□□□□ -1.28
LSAMP-207ENST00000539563 PHLPP2Q6ZVD8 1323 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 ATP8B1O43520 1251 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 SERPING1P05155 500 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 GSTA1P08263 222 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 GSTA2P09210 222 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 CDC37Q16543 378 aaPredicted RBP7.05□□□□□ -1.28
LSAMP-207ENST00000539563 PHLDB3Q6NSJ2 640 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 KCTD1Q719H9 257 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 THAP9Q9H5L6 903 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 QTRT2Q9H974 415 aaKnown RBP7.05□□□□□ -1.28
LSAMP-207ENST00000539563 SH3GLB2Q9NR46 395 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 PALD1Q9ULE6 856 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 SPDYE16A6NNV3 312 aaPredicted RBP7.05□□□□□ -1.28
LSAMP-207ENST00000539563 PRPF3O43395 683 aaKnown RBP7.05□□□□□ -1.28
LSAMP-207ENST00000539563 ECE1P42892 770 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 ASPHQ12797 758 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 KCTD2Q14681 263 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 SPDYE2Q495Y8 402 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 NSUN7Q8NE18 718 aaKnown RBP7.05□□□□□ -1.28
LSAMP-207ENST00000539563 UBE2Q2Q8WVN8 375 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 PPP1R13BQ96KQ4 1090 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 USP17L3A6NCW0 530 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 USP17L4A6NCW7 530 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 TTC36A6NLP5 189 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 SH2B2O14492 632 aaPredicted RBP7.05□□□□□ -1.28
LSAMP-207ENST00000539563 S100BP04271 92 aaPredicted RBP7.05□□□□□ -1.28
LSAMP-207ENST00000539563 SERPINB2P05120 415 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 RASSF7Q02833 373 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 USP17L1Q7RTZ2 530 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 PPP1R12CQ9BZL4 782 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 BCL2L12Q9HB09 334 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 CDC23Q9UJX2 597 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 MESDQ14696 234 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 RAB44Q7Z6P3 723 aaPredicted RBP7.05□□□□□ -1.28
LSAMP-207ENST00000539563 NME8Q8N427 588 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 TDRD7Q8NHU6 1098 aaKnown RBP7.05□□□□□ -1.28
LSAMP-207ENST00000539563 DESI2Q9BSY9 194 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 PARVGQ9HBI0 331 aa7.05□□□□□ -1.28
LSAMP-207ENST00000539563 CPSF3Q9UKF6 684 aaKnown RBP7.05□□□□□ -1.28
LSAMP-207ENST00000539563 ITSN1Q15811 1721 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms