RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 PPARDQ03181 441 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 ABCB5Q2M3G0 1257 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 DNAAF5Q86Y56 855 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 JAKMIP2Q96AA8 810 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 RIOX1Q9H6W3 641 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 ARFGAP3Q9NP61 516 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 BLOC1S4Q9NUP1 217 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 PANK4Q9NVE7 773 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 TIAM2Q8IVF5 1701 aa9.69□□□□□ -0.86
UBE3B-208ENST00000538070 BCORQ6W2J9 1755 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 EFCAB8A8MWE9 144 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 F5H6K3 240 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 KLRC3Q07444 240 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 SLC27A3Q5K4L6 730 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 MASTLQ96GX5 879 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 TSG101Q99816 390 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 FGFBP2Q9BYJ0 223 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 ZBTB21Q9ULJ3 1066 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 CTAGE15A4D2H0 777 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 BUB1O43683 1085 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 CTAGE8P0CG41 777 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 PNMA6AP0CW24 399 aaPredicted RBP9.68□□□□□ -0.86
UBE3B-208ENST00000538070 ZSCAN20P17040 1043 aaPredicted RBP9.68□□□□□ -0.86
UBE3B-208ENST00000538070 HOXA10P31260 410 aaPredicted RBP9.68□□□□□ -0.86
UBE3B-208ENST00000538070 ECE1P42892 770 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 TMC4Q7Z404 712 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 CTAGE6Q86UF2 777 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 CTAGE4Q8IX94 777 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 DAGLBQ8NCG7 672 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 AK8Q96MA6 479 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 NAA15Q9BXJ9 866 aaKnown RBP9.68□□□□□ -0.86
UBE3B-208ENST00000538070 BCAS3Q9H6U6 928 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 NHEJ1Q9H9Q4 299 aaPredicted RBP9.68□□□□□ -0.86
UBE3B-208ENST00000538070 HOMER2Q9NSB8 354 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 BCS1LQ9Y276 419 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 TNRC6CQ9HCJ0 1690 aaKnown RBP9.68□□□□□ -0.86
UBE3B-208ENST00000538070 BTAF1O14981 1849 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 GAKO14976 1311 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 LAD1O00515 517 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 EPHB6O15197 1021 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 ZNF185O15231 689 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 PBX1P40424 430 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 KCNJ6P48051 423 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 DCAF17Q5H9S7 520 aaPredicted RBP9.68□□□□□ -0.86
UBE3B-208ENST00000538070 PIGOQ8TEQ8 1089 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 TBC1D5Q92609 795 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 CCDC102AQ96A19 550 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 DHTKD1Q96HY7 919 aaPredicted RBP9.68□□□□□ -0.86
UBE3B-208ENST00000538070 PRMT6Q96LA8 375 aaPredicted RBP9.68□□□□□ -0.86
UBE3B-208ENST00000538070 SH2D3AQ9BRG2 576 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 PDGFDQ9GZP0 370 aaPredicted RBP9.68□□□□□ -0.86
UBE3B-208ENST00000538070 LACRTQ9GZZ8 138 aa9.68□□□□□ -0.86
UBE3B-208ENST00000538070 EEF1GP26641 437 aaKnown RBP9.67□□□□□ -0.86
UBE3B-208ENST00000538070 FAM26FQ5R3K3 315 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 FAM114A1Q8IWE2 563 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 SMAP1Q8IYB5 467 aaPredicted RBP9.67□□□□□ -0.86
UBE3B-208ENST00000538070 ANO3Q9BYT9 981 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 DNAJC18Q9H819 358 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 SMARCAL1Q9NZC9 954 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 CDC23Q9UJX2 597 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 LTBP4Q8N2S1 1624 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 CYLC1P35663 651 aaPredicted RBP9.67□□□□□ -0.86
UBE3B-208ENST00000538070 CERS3Q8IU89 383 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 CPXCR1Q8N123 301 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 NOA1Q8NC60 698 aaKnown RBP9.67□□□□□ -0.86
UBE3B-208ENST00000538070 RAD54LQ92698 747 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 NDST4Q9H3R1 872 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 THAP9Q9H5L6 903 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 MLXIPQ9HAP2 919 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.67□□□□□ -0.86
UBE3B-208ENST00000538070 RGL1Q9NZL6 768 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 PI4KBQ9UBF8 816 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 ARAP2Q8WZ64 1704 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 CLIC2O15247 247 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 ATP1A1P05023 1023 aaKnown RBP9.67□□□□□ -0.86
UBE3B-208ENST00000538070 PLA2G4BP0C869 781 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 PRPHP41219 470 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 PSMC6P62333 389 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 RAPGEF1Q13905 1077 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 KCNB1Q14721 858 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 GPATCH4Q5T3I0 446 aaKnown RBP9.67□□□□□ -0.86
UBE3B-208ENST00000538070 TPH2Q8IWU9 490 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 GSPT2Q8IYD1 628 aaKnown RBP9.67□□□□□ -0.86
UBE3B-208ENST00000538070 MYOCDQ8IZQ8 938 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 FAM163AQ96GL9 167 aaPredicted RBP9.67□□□□□ -0.86
UBE3B-208ENST00000538070 RIC8AQ9NPQ8 531 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 TMOD2Q9NZR1 351 aa9.67□□□□□ -0.86
UBE3B-208ENST00000538070 NRAPQ86VF7 1730 aa9.66□□□□□ -0.86
UBE3B-208ENST00000538070 A0A1B0GUL6 1792 aa9.66□□□□□ -0.86
UBE3B-208ENST00000538070 RCCD1A6NED2 376 aa9.66□□□□□ -0.86
UBE3B-208ENST00000538070 NDUFB10O96000 172 aa9.66□□□□□ -0.86
UBE3B-208ENST00000538070 EIF4A3P38919 411 aaKnown RBP9.66□□□□□ -0.86
UBE3B-208ENST00000538070 EN1Q05925 392 aaPredicted RBP9.66□□□□□ -0.86
UBE3B-208ENST00000538070 GABPAQ06546 454 aa9.66□□□□□ -0.86
UBE3B-208ENST00000538070 KIF5AQ12840 1032 aa9.66□□□□□ -0.86
UBE3B-208ENST00000538070 COASYQ13057 564 aa9.66□□□□□ -0.86
UBE3B-208ENST00000538070 SRGAP1Q7Z6B7 1085 aa9.66□□□□□ -0.86
UBE3B-208ENST00000538070 FBXO11Q86XK2 927 aa9.66□□□□□ -0.86
UBE3B-208ENST00000538070 CDAN1Q8IWY9 1227 aa9.66□□□□□ -0.86
UBE3B-208ENST00000538070 RDH13Q8NBN7 331 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms