RNA–Protein interactions for RNA: ENST00000537925.5

SNHG1-206, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,487 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-206ENST00000537925 ANKLE1Q8NAG6 615 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 GPKOWQ92917 476 aaPredicted RBP eCLIP13.16□□□□□ -0.32e-31■■■□□ 17.2
SNHG1-206ENST00000537925 CHAMP1Q96JM3 812 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 RMDN3Q96TC7 470 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 RNF26Q9BY78 433 aaPredicted RBP13.16□□□□□ -0.3
SNHG1-206ENST00000537925 DOCK5Q9H7D0 1870 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 PIK3CDO00329 1044 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 MEIS2O14770 477 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 PFKFB2O60825 505 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 GADD45BO75293 160 aaPredicted RBP13.16□□□□□ -0.3
SNHG1-206ENST00000537925 AKR1A1P14550 325 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 HOXA13P31271 388 aaPredicted RBP13.16□□□□□ -0.3
SNHG1-206ENST00000537925 SCRN1Q12765 414 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 STK3Q13188 491 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 PKN1Q16512 942 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 PFKFB3Q16875 520 aaPredicted RBP13.16□□□□□ -0.3
SNHG1-206ENST00000537925 CCDC144BQ3MJ40 725 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 TYW1BQ6NUM6 668 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 TAPT1Q6NXT6 567 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 PPP1R18Q6NYC8 613 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 UBE2Q1Q7Z7E8 422 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 NSUN6Q8TEA1 469 aaKnown RBP13.16□□□□□ -0.3
SNHG1-206ENST00000537925 PHKBQ93100 1093 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 IWS1Q96ST2 819 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 MPHOSPH6Q99547 160 aaKnown RBP13.16□□□□□ -0.3
SNHG1-206ENST00000537925 VTA1Q9NP79 307 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 PXMP2Q9NR77 195 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 BARHL2Q9NY43 387 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 ZHX1Q9UKY1 873 aaPredicted RBP13.16□□□□□ -0.3
SNHG1-206ENST00000537925 FAM184BQ9ULE4 1060 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 ZKSCAN5Q9Y2L8 839 aa13.16□□□□□ -0.3
SNHG1-206ENST00000537925 DNAH12Q6ZR08 3092 aa13.15□□□□□ -0.3
SNHG1-206ENST00000537925 B4DLN1 442 aa13.15□□□□□ -0.3
SNHG1-206ENST00000537925 STXBP3O00186 592 aa13.15□□□□□ -0.3
SNHG1-206ENST00000537925 SCG2P13521 617 aa13.15□□□□□ -0.3
SNHG1-206ENST00000537925 MNX1P50219 401 aaPredicted RBP13.15□□□□□ -0.3
SNHG1-206ENST00000537925 MRPL12P52815 198 aaKnown RBP13.15□□□□□ -0.3
SNHG1-206ENST00000537925 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.15□□□□□ -0.3
SNHG1-206ENST00000537925 FBXO16Q8IX29 292 aaPredicted RBP13.15□□□□□ -0.3
SNHG1-206ENST00000537925 FRMPD4Q14CM0 1322 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 RBM47A0AV96 593 aaKnown RBP13.14□□□□□ -0.31
SNHG1-206ENST00000537925 ADCY6O43306 1168 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 OFD1O75665 1012 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 TPM2P07951 284 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 RARBP10826 455 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 EIF2AK2P19525 551 aaKnown RBP13.14□□□□□ -0.31
SNHG1-206ENST00000537925 NAPAP54920 295 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 PDE4DQ08499 809 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 ARHGEF16Q5VV41 709 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 ANO1Q5XXA6 986 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 CPLX2Q6PUV4 134 aaKnown RBP13.14□□□□□ -0.31
SNHG1-206ENST00000537925 USP17L6PQ6QN14 398 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 EEPD1Q7L9B9 569 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 TEX2Q8IWB9 1127 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 PDCD2LQ9BRP1 358 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 SLC26A6Q9BXS9 759 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 PSTPIP2Q9H939 334 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 PDGFCQ9NRA1 345 aa13.14□□□□□ -0.31
SNHG1-206ENST00000537925 DLL1O00548 723 aa13.13□□□□□ -0.31
SNHG1-206ENST00000537925 CPLX1O14810 134 aa13.13□□□□□ -0.31
SNHG1-206ENST00000537925 DUSP11O75319 330 aaKnown RBP13.13□□□□□ -0.31
SNHG1-206ENST00000537925 NR3C2P08235 984 aa13.13□□□□□ -0.31
SNHG1-206ENST00000537925 ADCYAP1R1P41586 468 aa13.13□□□□□ -0.31
SNHG1-206ENST00000537925 KRT85P78386 507 aa13.13□□□□□ -0.31
SNHG1-206ENST00000537925 AKAP17AQ02040 695 aaKnown RBP13.13□□□□□ -0.31
SNHG1-206ENST00000537925 SSRP1Q08945 709 aaKnown RBP13.13□□□□□ -0.31
SNHG1-206ENST00000537925 PGM5Q15124 567 aa13.13□□□□□ -0.31
SNHG1-206ENST00000537925 IQSEC1Q6DN90 963 aa13.13□□□□□ -0.31
SNHG1-206ENST00000537925 FCHSD1Q86WN1 690 aa13.13□□□□□ -0.31
SNHG1-206ENST00000537925 TRIM22Q8IYM9 498 aa13.13□□□□□ -0.31
SNHG1-206ENST00000537925 SMARCC2Q8TAQ2 1214 aa13.13□□□□□ -0.31
SNHG1-206ENST00000537925 CUL5Q93034 780 aa13.13□□□□□ -0.31
SNHG1-206ENST00000537925 GTF3C6Q969F1 213 aa13.13□□□□□ -0.31
SNHG1-206ENST00000537925 FUCA2Q9BTY2 467 aa13.13□□□□□ -0.31
SNHG1-206ENST00000537925 RIC8AQ9NPQ8 531 aa13.13□□□□□ -0.31
SNHG1-206ENST00000537925 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.12□□□□□ -0.31
SNHG1-206ENST00000537925 ESYT2A0FGR8 921 aa13.12□□□□□ -0.31
SNHG1-206ENST00000537925 SMCO2A6NFE2 343 aa13.12□□□□□ -0.31
SNHG1-206ENST00000537925 PPFIA3O75145 1194 aa13.12□□□□□ -0.31
SNHG1-206ENST00000537925 ADAMTS4O75173 837 aa13.12□□□□□ -0.31
SNHG1-206ENST00000537925 FARP2O94887 1054 aaPredicted RBP13.12□□□□□ -0.31
SNHG1-206ENST00000537925 TNFAIP2Q03169 654 aa13.12□□□□□ -0.31
SNHG1-206ENST00000537925 STXBP2Q15833 593 aa13.12□□□□□ -0.31
SNHG1-206ENST00000537925 LARP1BQ659C4 914 aaKnown RBP13.12□□□□□ -0.31
SNHG1-206ENST00000537925 VSIG10LQ86VR7 867 aa13.12□□□□□ -0.31
SNHG1-206ENST00000537925 NECAB1Q8N987 351 aa13.12□□□□□ -0.31
SNHG1-206ENST00000537925 ARRDC4Q8NCT1 418 aa13.12□□□□□ -0.31
SNHG1-206ENST00000537925 LENG1Q96BZ8 264 aaPredicted RBP13.12□□□□□ -0.31
SNHG1-206ENST00000537925 PAWRQ96IZ0 340 aaKnown RBP13.12□□□□□ -0.31
SNHG1-206ENST00000537925 NAP1L5Q96NT1 182 aaPredicted RBP13.12□□□□□ -0.31
SNHG1-206ENST00000537925 LLPHQ9BRT6 129 aaKnown RBP13.12□□□□□ -0.31
SNHG1-206ENST00000537925 SCAND2PQ9GZW5 306 aaPredicted RBP13.12□□□□□ -0.31
SNHG1-206ENST00000537925 GDPD2Q9HCC8 539 aa13.12□□□□□ -0.31
SNHG1-206ENST00000537925 XPNPEP3Q9NQH7 507 aa13.12□□□□□ -0.31
SNHG1-206ENST00000537925 GNEQ9Y223 722 aaKnown RBP13.12□□□□□ -0.31
SNHG1-206ENST00000537925 STK36Q9NRP7 1315 aa13.12□□□□□ -0.31
SNHG1-206ENST00000537925 SYNRGQ9UMZ2 1314 aa13.12□□□□□ -0.31
SNHG1-206ENST00000537925 DNM1LO00429 736 aa13.11□□□□□ -0.31
SNHG1-206ENST00000537925 EIF3JO75822 258 aaKnown RBP13.11□□□□□ -0.31
SNHG1-206ENST00000537925 CDKL5O76039 1030 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms