RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 KIF2BQ8N4N8 673 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 DNAJC9Q8WXX5 260 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 FAM161BQ96MY7 647 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 OLFML3Q9NRN5 406 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 FANCD2Q9BXW9 1451 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 ZMYM3Q14202 1370 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 ADCY3O60266 1144 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 UBTFL6P0CB48 400 aaPredicted RBP6.13□□□□□ -1.43
CSMD1-215ENST00000537824 TFCP2Q12800 502 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 PROSER2Q86WR7 435 aaPredicted RBP6.13□□□□□ -1.43
CSMD1-215ENST00000537824 V9GY48 417 aaPredicted RBP6.13□□□□□ -1.43
CSMD1-215ENST00000537824 A0A1W2PQ27 194 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 A0A1W2PQ64 194 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 A0A1W2PQD8 194 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 GTPBP6O43824 516 aaPredicted RBP6.13□□□□□ -1.43
CSMD1-215ENST00000537824 CARSP49589 748 aaKnown RBP6.13□□□□□ -1.43
CSMD1-215ENST00000537824 SF3B3Q15393 1217 aaKnown RBP6.13□□□□□ -1.43
CSMD1-215ENST00000537824 ARHGEF18Q6ZSZ5 1173 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 DIS3L2Q8IYB7 885 aaKnown RBP6.13□□□□□ -1.43
CSMD1-215ENST00000537824 EEF2KMTQ96G04 330 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 PKD2L1Q9P0L9 805 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 DCTN4Q9UJW0 460 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 ZBTB21Q9ULJ3 1066 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 TMCC1O94876 653 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 GNA14O95837 355 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 TMCO5AQ8N6Q1 288 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 MYL10Q9BUA6 226 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 SMYD2Q9NRG4 433 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 MAD1L1Q9Y6D9 718 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 DAPK3O43293 454 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 UQCRFS1P1P0C7P4 283 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 CYP27A1Q02318 531 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 AP1B1Q10567 949 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 TRIM16LQ309B1 348 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 GSDMAQ96QA5 445 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 PCDHA13Q9Y5I0 950 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 CFAP74Q9C0B2 1584 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 GTPBP10A4D1E9 387 aaKnown RBP6.13□□□□□ -1.43
CSMD1-215ENST00000537824 MEFVO15553 781 aaPredicted RBP6.13□□□□□ -1.43
CSMD1-215ENST00000537824 ZNF710Q8N1W2 664 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 ARL10Q8N8L6 244 aa6.13□□□□□ -1.43
CSMD1-215ENST00000537824 TGS1Q96RS0 853 aaKnown RBP6.13□□□□□ -1.43
CSMD1-215ENST00000537824 NOP56O00567 594 aaKnown RBP6.12□□□□□ -1.43
CSMD1-215ENST00000537824 SMYD4Q8IYR2 804 aaPredicted RBP6.12□□□□□ -1.43
CSMD1-215ENST00000537824 SH2D3CQ8N5H7 860 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 CLMNQ96JQ2 1002 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 ATP6V1G3Q96LB4 118 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 ZNF652Q9Y2D9 606 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 CCT8L1PA6NM43 557 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 VAMP4O75379 141 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 PDE5AO76074 875 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 ATP1A3P13637 1013 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 LSP1P33241 339 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 EIF4A3P38919 411 aaKnown RBP6.12□□□□□ -1.43
CSMD1-215ENST00000537824 MESDQ14696 234 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 RINLQ6ZS11 566 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 NUDT16Q96DE0 195 aaKnown RBP6.12□□□□□ -1.43
CSMD1-215ENST00000537824 UPF3AQ9H1J1 476 aaKnown RBP6.12□□□□□ -1.43
CSMD1-215ENST00000537824 TRPC5Q9UL62 973 aaPredicted RBP6.12□□□□□ -1.43
CSMD1-215ENST00000537824 H7C1D1 291 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 GNGT2O14610 69 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 BACH1O14867 736 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 STAT2P52630 851 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 EIF3BP55884 814 aaKnown RBP6.12□□□□□ -1.43
CSMD1-215ENST00000537824 DTX3LQ8TDB6 740 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 PITPNM3Q9BZ71 974 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 POLD4Q9HCU8 107 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 HDAC6Q9UBN7 1215 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 TTC21BQ7Z4L5 1316 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 PIKFYVEQ9Y2I7 2098 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 PIK3C2GO75747 1445 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 ASPHQ12797 758 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 ESCO1Q5FWF5 840 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 ADCK1Q86TW2 530 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 MYLK4Q86YV6 388 aaPredicted RBP6.12□□□□□ -1.43
CSMD1-215ENST00000537824 NSMCE1Q8WV22 266 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 CACYBPQ9HB71 228 aaKnown RBP6.12□□□□□ -1.43
CSMD1-215ENST00000537824 RTEL1Q9NZ71 1219 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 RGL1Q9NZL6 768 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 LRWD1Q9UFC0 647 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 SKAP2O75563 359 aaPredicted RBP6.12□□□□□ -1.43
CSMD1-215ENST00000537824 RCSD1Q6JBY9 416 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 TSPYL6Q8N831 410 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 THAP11Q96EK4 314 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 ZNF692Q9BU19 519 aaPredicted RBP6.12□□□□□ -1.43
CSMD1-215ENST00000537824 TRIM37O94972 964 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 PARP1P09874 1014 aaKnown RBP6.12□□□□□ -1.43
CSMD1-215ENST00000537824 CA4P22748 312 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 TRIML1Q8N9V2 468 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 CHMP6Q96FZ7 201 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 LBHD1Q9BQE6 289 aaPredicted RBP6.12□□□□□ -1.43
CSMD1-215ENST00000537824 TM6SF1Q9BZW5 370 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 KDRP35968 1356 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 POLEQ07864 2286 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 BCRP11274 1271 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 STX18Q9P2W9 335 aaKnown RBP6.12□□□□□ -1.43
CSMD1-215ENST00000537824 MAN1B1Q9UKM7 699 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 ATP11BQ9Y2G3 1177 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 ATP6V1B1P15313 513 aa6.12□□□□□ -1.43
CSMD1-215ENST00000537824 PLCB4Q15147 1175 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms