RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 DCAF15Q66K64 600 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 UNC13DQ70J99 1090 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 LDHDQ86WU2 507 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 APOBEC3FQ8IUX4 373 aaKnown RBP25.41■■□□□ 1.66
HMGA2-206ENST00000536545 TRPM4Q8TD43 1214 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 DHTKD1Q96HY7 919 aaPredicted RBP25.41■■□□□ 1.66
HMGA2-206ENST00000536545 FAM20AQ96MK3 541 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 NT5C3AQ9H0P0 336 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 KCND1Q9NSA2 647 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 TRIM49BA6NDI0 452 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 H7C1D1 291 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 CFBP00751 764 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 PBX1P40424 430 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 KCNJ6P48051 423 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 STK4Q13043 487 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 TBC1D5Q92609 795 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 UIMC1Q96RL1 719 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 SLF1Q9BQI6 1058 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 LRRC27Q9C0I9 530 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 GPRC5DQ9NZD1 345 aa25.41■■□□□ 1.66
HMGA2-206ENST00000536545 ZNF536O15090 1300 aa25.4■■□□□ 1.66
HMGA2-206ENST00000536545 IGLV3-22A0A075B6J6 115 aa25.4■■□□□ 1.66
HMGA2-206ENST00000536545 STAT3P40763 770 aa25.4■■□□□ 1.66
HMGA2-206ENST00000536545 PPP1R2P41236 205 aa25.4■■□□□ 1.66
HMGA2-206ENST00000536545 KRT31Q15323 416 aa25.4■■□□□ 1.66
HMGA2-206ENST00000536545 TTI2Q6NXR4 508 aa25.4■■□□□ 1.66
HMGA2-206ENST00000536545 FCHSD1Q86WN1 690 aa25.4■■□□□ 1.66
HMGA2-206ENST00000536545 KIAA0895Q8NCT3 520 aa25.4■■□□□ 1.66
HMGA2-206ENST00000536545 ZNF112Q9UJU3 913 aa25.4■■□□□ 1.66
HMGA2-206ENST00000536545 R3HCC1Q9Y3T6 440 aaKnown RBP25.4■■□□□ 1.66
HMGA2-206ENST00000536545 MSH4O15457 936 aa25.39■■□□□ 1.66
HMGA2-206ENST00000536545 ICAM1P05362 532 aa25.39■■□□□ 1.66
HMGA2-206ENST00000536545 FCER1AP12319 257 aa25.39■■□□□ 1.66
HMGA2-206ENST00000536545 ANGEL2Q5VTE6 544 aaKnown RBP25.39■■□□□ 1.66
HMGA2-206ENST00000536545 TMX1Q9H3N1 280 aa25.39■■□□□ 1.66
HMGA2-206ENST00000536545 VAV3Q9UKW4 847 aa25.39■■□□□ 1.66
HMGA2-206ENST00000536545 LRRC10BA6NIK2 292 aa25.39■■□□□ 1.65
HMGA2-206ENST00000536545 TEX33O43247 280 aa25.39■■□□□ 1.65
HMGA2-206ENST00000536545 TCP11X2Q5H9J9 407 aa25.39■■□□□ 1.65
HMGA2-206ENST00000536545 DNTTIP2Q5QJE6 756 aaKnown RBP25.39■■□□□ 1.65
HMGA2-206ENST00000536545 IRF2BP1Q8IU81 584 aa25.39■■□□□ 1.65
HMGA2-206ENST00000536545 CCDC112Q8NEF3 446 aa25.39■■□□□ 1.65
HMGA2-206ENST00000536545 POTEB3A0JP26 581 aa25.38■■□□□ 1.65
HMGA2-206ENST00000536545 POTECB2RU33 542 aa25.38■■□□□ 1.65
HMGA2-206ENST00000536545 KCNJ18B7U540 433 aa25.38■■□□□ 1.65
HMGA2-206ENST00000536545 LMNB1P20700 586 aa25.38■■□□□ 1.65
HMGA2-206ENST00000536545 TERF1P54274 439 aa25.38■■□□□ 1.65
HMGA2-206ENST00000536545 EHHADHQ08426 723 aa25.38■■□□□ 1.65
HMGA2-206ENST00000536545 KCNJ12Q14500 433 aa25.38■■□□□ 1.65
HMGA2-206ENST00000536545 HAUS3Q68CZ6 603 aa25.38■■□□□ 1.65
HMGA2-206ENST00000536545 POTEBQ6S5H4 581 aa25.38■■□□□ 1.65
HMGA2-206ENST00000536545 SAMD1Q6SPF0 538 aaPredicted RBP25.38■■□□□ 1.65
HMGA2-206ENST00000536545 SCYL3Q8IZE3 742 aa25.38■■□□□ 1.65
HMGA2-206ENST00000536545 GPC2Q8N158 579 aa25.38■■□□□ 1.65
HMGA2-206ENST00000536545 PRPF38AQ8NAV1 312 aaKnown RBP25.38■■□□□ 1.65
HMGA2-206ENST00000536545 DDX12PQ92771 950 aa25.38■■□□□ 1.65
HMGA2-206ENST00000536545 THAP9Q9H5L6 903 aa25.38■■□□□ 1.65
HMGA2-206ENST00000536545 NRDCO43847 1150 aa25.37■■□□□ 1.65
HMGA2-206ENST00000536545 MED24O75448 989 aa25.37■■□□□ 1.65
HMGA2-206ENST00000536545 CCNE1P24864 410 aa25.37■■□□□ 1.65
HMGA2-206ENST00000536545 DGKZQ13574 1117 aa25.37■■□□□ 1.65
HMGA2-206ENST00000536545 MTMR2Q13614 643 aa25.37■■□□□ 1.65
HMGA2-206ENST00000536545 FILIP1LQ4L180 1135 aa25.37■■□□□ 1.65
HMGA2-206ENST00000536545 CYP2W1Q8TAV3 490 aa25.37■■□□□ 1.65
HMGA2-206ENST00000536545 NOC3LQ8WTT2 800 aaKnown RBP25.37■■□□□ 1.65
HMGA2-206ENST00000536545 P2RX5Q93086 422 aa25.37■■□□□ 1.65
HMGA2-206ENST00000536545 HOOK2Q96ED9 719 aa25.37■■□□□ 1.65
HMGA2-206ENST00000536545 TRIM47Q96LD4 638 aa25.37■■□□□ 1.65
HMGA2-206ENST00000536545 DUSP9Q99956 384 aaKnown RBP25.37■■□□□ 1.65
HMGA2-206ENST00000536545 EHMT1Q9H9B1 1298 aa25.37■■□□□ 1.65
HMGA2-206ENST00000536545 CCPG1Q9ULG6 757 aa25.37■■□□□ 1.65
HMGA2-206ENST00000536545 SSC5DA1L4H1 1573 aa25.37■■□□□ 1.65
HMGA2-206ENST00000536545 VCAM1P19320 739 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 HOXA7P31268 230 aaPredicted RBP25.36■■□□□ 1.65
HMGA2-206ENST00000536545 COPB1P53618 953 aaKnown RBP25.36■■□□□ 1.65
HMGA2-206ENST00000536545 DYMQ7RTS9 669 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 DNAJC19Q96DA6 116 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 AGBL1Q96MI9 1066 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 WDR18Q9BV38 432 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 KIAA1024Q9UPX6 916 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 RBBP6Q7Z6E9 1792 aaKnown RBP25.36■■□□□ 1.65
HMGA2-206ENST00000536545 PARP14Q460N5 1801 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 BICDL2A1A5D9 508 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 USP27XA6NNY8 438 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 ZNF76P36508 570 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 HSD17B4P51659 736 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 GHRHRQ02643 423 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 GOLGA8FQ08AF8 430 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 GOLGA8DPQ0D2H9 430 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 CCAR2Q8N163 923 aaKnown RBP25.36■■□□□ 1.65
HMGA2-206ENST00000536545 ANKRD20A12PQ8NF67 263 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 HPS3Q969F9 1004 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 EMILIN3Q9NT22 766 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 GGA3Q9NZ52 723 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 STK24Q9Y6E0 443 aa25.36■■□□□ 1.65
HMGA2-206ENST00000536545 SBF1O95248 1867 aa25.35■■□□□ 1.65
HMGA2-206ENST00000536545 NCAPH2Q6IBW4 605 aa25.35■■□□□ 1.65
HMGA2-206ENST00000536545 ARHGAP27Q6ZUM4 889 aa25.35■■□□□ 1.65
HMGA2-206ENST00000536545 TMEM139Q8IV31 216 aa25.35■■□□□ 1.65
HMGA2-206ENST00000536545 TC2NQ8N9U0 490 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms