RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 DRC1Q96MC2 740 aa7.82□□□□□ -1.16
PRKDC-205ENST00000535375 DNAJC2Q99543 621 aaKnown RBP7.82□□□□□ -1.16
PRKDC-205ENST00000535375 PHF20Q9BVI0 1012 aa7.82□□□□□ -1.16
PRKDC-205ENST00000535375 GPR27Q9NS67 375 aa7.82□□□□□ -1.16
PRKDC-205ENST00000535375 SIT1Q9Y3P8 196 aa7.82□□□□□ -1.16
PRKDC-205ENST00000535375 H7BY64 318 aa7.81□□□□□ -1.16
PRKDC-205ENST00000535375 CNKSR3Q6P9H4 555 aa7.81□□□□□ -1.16
PRKDC-205ENST00000535375 RIOX2Q8IUF8 465 aa7.81□□□□□ -1.16
PRKDC-205ENST00000535375 TMEM151BQ8IW70 566 aa7.81□□□□□ -1.16
PRKDC-205ENST00000535375 SEC14L1Q92503 715 aa7.81□□□□□ -1.16
PRKDC-205ENST00000535375 OSBP2Q969R2 916 aa7.81□□□□□ -1.16
PRKDC-205ENST00000535375 RNF38Q9H0F5 515 aa7.81□□□□□ -1.16
PRKDC-205ENST00000535375 SNTG2Q9NY99 539 aa7.81□□□□□ -1.16
PRKDC-205ENST00000535375 NPFFR2Q9Y5X5 522 aa7.81□□□□□ -1.16
PRKDC-205ENST00000535375 KDM2BQ8NHM5 1336 aa7.8□□□□□ -1.16
PRKDC-205ENST00000535375 IRS2Q9Y4H2 1338 aa7.8□□□□□ -1.16
PRKDC-205ENST00000535375 IRS4O14654 1257 aaPredicted RBP7.8□□□□□ -1.16
PRKDC-205ENST00000535375 CHRNA2Q15822 529 aa7.8□□□□□ -1.16
PRKDC-205ENST00000535375 KRTAP19-4Q3LI73 84 aa7.8□□□□□ -1.16
PRKDC-205ENST00000535375 YOD1Q5VVQ6 348 aaPredicted RBP7.8□□□□□ -1.16
PRKDC-205ENST00000535375 RSPO2Q6UXX9 243 aaPredicted RBP7.8□□□□□ -1.16
PRKDC-205ENST00000535375 CILP2Q8IUL8 1156 aa7.8□□□□□ -1.16
PRKDC-205ENST00000535375 NLGN1Q8N2Q7 840 aa7.8□□□□□ -1.16
PRKDC-205ENST00000535375 ZBTB38Q8NAP3 1195 aaPredicted RBP7.8□□□□□ -1.16
PRKDC-205ENST00000535375 MKL1Q969V6 931 aa7.8□□□□□ -1.16
PRKDC-205ENST00000535375 BCAS3Q9H6U6 928 aa7.8□□□□□ -1.16
PRKDC-205ENST00000535375 X6R8D5 127 aa7.8□□□□□ -1.16
PRKDC-205ENST00000535375 DIAPH1O60610 1272 aaKnown RBP7.79□□□□□ -1.16
PRKDC-205ENST00000535375 ASGR2P07307 311 aa7.79□□□□□ -1.16
PRKDC-205ENST00000535375 ZSCAN22P10073 491 aaPredicted RBP7.79□□□□□ -1.16
PRKDC-205ENST00000535375 RASA3Q14644 834 aa7.79□□□□□ -1.16
PRKDC-205ENST00000535375 TCERG1LQ5VWI1 586 aa7.79□□□□□ -1.16
PRKDC-205ENST00000535375 MILR1Q7Z6M3 343 aa7.79□□□□□ -1.16
PRKDC-205ENST00000535375 NLRP10Q86W26 655 aa7.79□□□□□ -1.16
PRKDC-205ENST00000535375 PANK1Q8TE04 598 aa7.79□□□□□ -1.16
PRKDC-205ENST00000535375 TRBV23-1A0A0A0MS06 115 aa7.78□□□□□ -1.16
PRKDC-205ENST00000535375 BLACEA4D250 179 aa7.78□□□□□ -1.16
PRKDC-205ENST00000535375 FAM221BA6H8Z2 402 aa7.78□□□□□ -1.16
PRKDC-205ENST00000535375 DGKIO75912 1065 aa7.78□□□□□ -1.16
PRKDC-205ENST00000535375 PMLP29590 882 aa7.78□□□□□ -1.16
PRKDC-205ENST00000535375 SLC6A11P48066 632 aa7.78□□□□□ -1.16
PRKDC-205ENST00000535375 SPOCD1Q6ZMY3 1216 aa7.78□□□□□ -1.16
PRKDC-205ENST00000535375 SIAH1Q8IUQ4 282 aa7.78□□□□□ -1.16
PRKDC-205ENST00000535375 Q8N1Y9 231 aa7.78□□□□□ -1.16
PRKDC-205ENST00000535375 PWWP2AQ96N64 755 aa7.78□□□□□ -1.16
PRKDC-205ENST00000535375 DNAJC7Q99615 494 aa7.78□□□□□ -1.16
PRKDC-205ENST00000535375 ZFYVE21Q9BQ24 234 aa7.78□□□□□ -1.16
PRKDC-205ENST00000535375 OSBPL2Q9H1P3 480 aa7.78□□□□□ -1.16
PRKDC-205ENST00000535375 EPB41L1Q9H4G0 881 aa7.78□□□□□ -1.16
PRKDC-205ENST00000535375 FBXL7Q9UJT9 491 aa7.78□□□□□ -1.16
PRKDC-205ENST00000535375 ADCY3O60266 1144 aa7.77□□□□□ -1.17
PRKDC-205ENST00000535375 FAM153BP0C7A2 387 aa7.77□□□□□ -1.17
PRKDC-205ENST00000535375 ATF2P15336 505 aa7.77□□□□□ -1.17
PRKDC-205ENST00000535375 LIMS1P48059 325 aa7.77□□□□□ -1.17
PRKDC-205ENST00000535375 AFF3P51826 1226 aaKnown RBP7.77□□□□□ -1.17
PRKDC-205ENST00000535375 SUMO1P63165 101 aaKnown RBP7.77□□□□□ -1.17
PRKDC-205ENST00000535375 FOXO4P98177 505 aa7.77□□□□□ -1.17
PRKDC-205ENST00000535375 LONRF2Q1L5Z9 754 aa7.77□□□□□ -1.17
PRKDC-205ENST00000535375 KCNT2Q6UVM3 1135 aa7.77□□□□□ -1.17
PRKDC-205ENST00000535375 FAM129CQ86XR2 697 aa7.77□□□□□ -1.17
PRKDC-205ENST00000535375 C1QL4Q86Z23 238 aa7.77□□□□□ -1.17
PRKDC-205ENST00000535375 TMEFF1Q8IYR6 380 aa7.77□□□□□ -1.17
PRKDC-205ENST00000535375 IFNL3Q8IZI9 196 aa7.77□□□□□ -1.17
PRKDC-205ENST00000535375 DDX11Q96FC9 970 aa7.77□□□□□ -1.17
PRKDC-205ENST00000535375 YIPF4Q9BSR8 244 aa7.77□□□□□ -1.17
PRKDC-205ENST00000535375 PALD1Q9ULE6 856 aa7.77□□□□□ -1.17
PRKDC-205ENST00000535375 PLA2G2DQ9UNK4 145 aa7.77□□□□□ -1.17
PRKDC-205ENST00000535375 HGSO14964 777 aaPredicted RBP7.76□□□□□ -1.17
PRKDC-205ENST00000535375 SGSM2O43147 1006 aa7.76□□□□□ -1.17
PRKDC-205ENST00000535375 MSCO60682 206 aa7.76□□□□□ -1.17
PRKDC-205ENST00000535375 FBLN1P23142 703 aa7.76□□□□□ -1.17
PRKDC-205ENST00000535375 IGFBP6P24592 240 aaPredicted RBP7.76□□□□□ -1.17
PRKDC-205ENST00000535375 NFE2L2Q16236 605 aa7.76□□□□□ -1.17
PRKDC-205ENST00000535375 NTRK3Q16288 839 aa7.76□□□□□ -1.17
PRKDC-205ENST00000535375 KIZQ2M2Z5 673 aa7.76□□□□□ -1.17
PRKDC-205ENST00000535375 FBLN7Q53RD9 439 aa7.76□□□□□ -1.17
PRKDC-205ENST00000535375 ZC3H12BQ5HYM0 836 aaKnown RBP7.76□□□□□ -1.17
PRKDC-205ENST00000535375 FAM209AQ5JX71 171 aa7.76□□□□□ -1.17
PRKDC-205ENST00000535375 STEAP3Q658P3 488 aa7.76□□□□□ -1.17
PRKDC-205ENST00000535375 STYK1Q6J9G0 422 aa7.76□□□□□ -1.17
PRKDC-205ENST00000535375 AMIGO3Q86WK7 504 aa7.76□□□□□ -1.17
PRKDC-205ENST00000535375 CPA5Q8WXQ8 436 aa7.76□□□□□ -1.17
PRKDC-205ENST00000535375 UBXN4Q92575 508 aa7.76□□□□□ -1.17
PRKDC-205ENST00000535375 ALG1Q9BT22 464 aa7.76□□□□□ -1.17
PRKDC-205ENST00000535375 KRIT1O00522 736 aa7.75□□□□□ -1.17
PRKDC-205ENST00000535375 MAFKO60675 156 aa7.75□□□□□ -1.17
PRKDC-205ENST00000535375 APPP05067 770 aa7.75□□□□□ -1.17
PRKDC-205ENST00000535375 GPR85P60893 370 aa7.75□□□□□ -1.17
PRKDC-205ENST00000535375 CACNB2Q08289 660 aaPredicted RBP7.75□□□□□ -1.17
PRKDC-205ENST00000535375 LBX2Q6XYB7 198 aa7.75□□□□□ -1.17
PRKDC-205ENST00000535375 ETV3LQ6ZN32 361 aa7.75□□□□□ -1.17
PRKDC-205ENST00000535375 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.75□□□□□ -1.17
PRKDC-205ENST00000535375 DACT3Q96B18 629 aaPredicted RBP7.75□□□□□ -1.17
PRKDC-205ENST00000535375 DHRS4Q9BTZ2 278 aa7.75□□□□□ -1.17
PRKDC-205ENST00000535375 JAM3Q9BX67 310 aa7.75□□□□□ -1.17
PRKDC-205ENST00000535375 EPB41L4AQ9HCS5 686 aaPredicted RBP7.75□□□□□ -1.17
PRKDC-205ENST00000535375 MC3RP41968 323 aa7.74□□□□□ -1.17
PRKDC-205ENST00000535375 FOXB2Q5VYV0 432 aa7.74□□□□□ -1.17
PRKDC-205ENST00000535375 B3GNT8Q7Z7M8 397 aa7.74□□□□□ -1.17
PRKDC-205ENST00000535375 ZC3H18Q86VM9 953 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms