RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 IFNKQ9P0W0 207 aa12.38□□□□□ -0.43
AMBRA1-211ENST00000533727 PPP6R2O75170 966 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 SLC25A27O95847 323 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 MYL3P08590 195 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 SFNP31947 248 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 BPIFB4P59827 614 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 ANKRD36BP1Q96IX9 119 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 SPOPO43791 374 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 PTPREP23469 700 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 SBK1Q52WX2 424 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 TMTC3Q6ZXV5 915 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 ZNF280CQ8ND82 737 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 FAM76AQ8TAV0 307 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 LARP4BQ92615 738 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 KMT5AQ9NQR1 393 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 TBC1D7Q9P0N9 293 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 AGTPBP1Q9UPW5 1226 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 TMEM110-MUSTN1A8MSY1 372 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 F5H6K3 240 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 HNRNPDLO14979 420 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 POLR2BP30876 1174 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 KLRC3Q07444 240 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 RAD51AP2Q09MP3 1159 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 SCRN1Q12765 414 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 KIAA1841Q6NSI8 718 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 NSUN4Q96CB9 384 aaKnown RBP12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 ELP3Q9H9T3 547 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 SERTAD1Q9UHV2 236 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 KIAA1024Q9UPX6 916 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 STK36Q9NRP7 1315 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 EVCP57679 992 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 SND1Q7KZF4 910 aaKnown RBP eCLIP12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 UBL4BQ8N7F7 174 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 MCPH1Q8NEM0 835 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 NLRP7Q8WX94 980 aa12.37□□□□□ -0.43
AMBRA1-211ENST00000533727 CYP2D7A0A087X1C5 515 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 A0A1W2PQ27 194 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 A0A1W2PQ64 194 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 A0A1W2PQD8 194 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 SEC24BO95487 1268 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 BRD1O95696 1058 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 MMP1P03956 469 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 FBXO33Q7Z6M2 555 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 TDRD7Q8NHU6 1098 aaKnown RBP12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 POMGNT1Q8WZA1 660 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 CYP2J2P51589 502 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 GRM4Q14833 912 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 ARL6IP4Q66PJ3 421 aaKnown RBP12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 IGSF22Q8N9C0 903 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 NYAP2Q9P242 653 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 WDR64B1ANS9 1081 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 CTNND1O60716 968 aaKnown RBP12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 TNNC1P63316 161 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 CYP4A11Q02928 519 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 EP400NLQ6ZTU2 488 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 B4GALNT4Q76KP1 1039 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 TXNDC16Q9P2K2 825 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 MEGF6O75095 1541 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 SLFN12LQ6IEE8 588 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 CPLX4Q7Z7G2 160 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 MAIP1Q8WWC4 291 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 FAM20AQ96MK3 541 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 TEX13BQ9BXU2 312 aa12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 STMN4Q9H169 189 aaPredicted RBP12.36□□□□□ -0.43
AMBRA1-211ENST00000533727 FERP16591 822 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 DNAJC21Q5F1R6 531 aaKnown RBP12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 CYP26C1Q6V0L0 522 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 ZBED2Q9BTP6 218 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 VPS16Q9H269 839 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 RAVER2Q9HCJ3 691 aaKnown RBP12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 PARP2Q9UGN5 583 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 PFKFB1P16118 471 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 GTF2A2P52657 109 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 C12orf60Q5U649 245 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 POTEDQ86YR6 584 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 RPAP3Q9H6T3 665 aaPredicted RBP12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 FAM204AQ9H8W3 233 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 CELF2O95319 508 aaKnown RBP12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 CDC42EP1Q00587 391 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 MTMR1Q13613 665 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 PDZD4Q76G19 769 aaPredicted RBP12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 NSUN7Q8NE18 718 aaKnown RBP12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 CEP95Q96GE4 821 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 IQCGQ9H095 443 aaKnown RBP12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 RIC8AQ9NPQ8 531 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 ALDH1A1P00352 501 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 SLC39A14Q15043 492 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 ATG9AQ7Z3C6 839 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 SYCE1Q8N0S2 351 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 MMS19Q96T76 1030 aa12.35□□□□□ -0.43
AMBRA1-211ENST00000533727 SORBS3O60504 671 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 STAT1P42224 750 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 ZNF445P59923 1031 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 SFMBT2Q5VUG0 894 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 EEPD1Q7L9B9 569 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 DAAM2Q86T65 1068 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 IFT122Q9HBG6 1241 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 POLR3EQ9NVU0 708 aa12.34□□□□□ -0.43
AMBRA1-211ENST00000533727 MTRF1LQ9UGC7 380 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms