RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 F8W8V4 182 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 PRPF3O43395 683 aaKnown RBP11.71□□□□□ -0.53
COLCA1-203ENST00000532918 RPN1P04843 607 aaKnown RBP11.71□□□□□ -0.53
COLCA1-203ENST00000532918 PFKFB1P16118 471 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 CATSPER4Q7RTX7 472 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 CCDC105Q8IYK2 499 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 THEM5Q8N1Q8 247 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 BANK1Q8NDB2 785 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 TBCKQ8TEA7 893 aa11.71□□□□□ -0.53
COLCA1-203ENST00000532918 KCNJ18B7U540 433 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 USP17L15C9J2P7 530 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 USP17L13C9JLJ4 530 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 USP17L11C9JVI0 530 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 USP17L18D6R9N7 530 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 USP17L22D6RA61 530 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 USP17L17D6RBQ6 530 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 USP17L19D6RCP7 530 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 USP17L20D6RJB6 530 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 TNPO2O14787 897 aaKnown RBP11.71□□□□□ -0.54
COLCA1-203ENST00000532918 CEP104O60308 925 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 EIF2AK2P19525 551 aaKnown RBP11.71□□□□□ -0.54
COLCA1-203ENST00000532918 USP17L24Q0WX57 530 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 MORC3Q14149 939 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 KCNJ12Q14500 433 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 ZBTB33Q86T24 672 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 IFT20Q8IY31 132 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.71□□□□□ -0.54
COLCA1-203ENST00000532918 ZFYVE28Q9HCC9 887 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 FAM207AQ9NSI2 230 aaPredicted RBP11.71□□□□□ -0.54
COLCA1-203ENST00000532918 OTUD5Q96G74 571 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 RPF1Q9H9Y2 349 aaKnown RBP11.71□□□□□ -0.54
COLCA1-203ENST00000532918 SH3GLB2Q9NR46 395 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 ABCC12Q96J65 1359 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 SPATA31A1Q5TZJ5 1347 aa11.71□□□□□ -0.54
COLCA1-203ENST00000532918 ESYT2A0FGR8 921 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 ZNF853P0CG23 659 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 SRGAP2BP0DMP2 458 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 ARPP19P56211 112 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 FYB2Q5VWT5 728 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 SNRNP48Q6IEG0 339 aaKnown RBP11.7□□□□□ -0.54
COLCA1-203ENST00000532918 DSTYKQ6XUX3 929 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 RBM46Q8TBY0 533 aaKnown RBP11.7□□□□□ -0.54
COLCA1-203ENST00000532918 DYNLL2Q96FJ2 89 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 GPR101Q96P66 508 aaPredicted RBP11.7□□□□□ -0.54
COLCA1-203ENST00000532918 PCDHB4Q9Y5E5 795 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 MROH7-TTC4A0A0A0MT08 1334 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 CIITAP33076 1130 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 KCNV1Q6PIU1 500 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 GBP7Q8N8V2 638 aaPredicted RBP11.7□□□□□ -0.54
COLCA1-203ENST00000532918 PI4K2BQ8TCG2 481 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 P3H4Q92791 437 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 NLRC4Q9NPP4 1024 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 TOPORSQ9NS56 1045 aaPredicted RBP11.7□□□□□ -0.54
COLCA1-203ENST00000532918 ZBBXA8MT70 800 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 NBPF11Q86T75 865 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 RIC8AQ9NPQ8 531 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 TBC1D22BQ9NU19 505 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 LDHAP00338 332 aaKnown RBP11.7□□□□□ -0.54
COLCA1-203ENST00000532918 SH3RF3Q8TEJ3 882 aaPredicted RBP11.7□□□□□ -0.54
COLCA1-203ENST00000532918 PARK7Q99497 189 aaKnown RBP11.7□□□□□ -0.54
COLCA1-203ENST00000532918 KIF9Q9HAQ2 790 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 FAM114A2Q9NRY5 505 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 LMCD1Q9NZU5 365 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 SAMD15Q9P1V8 674 aa11.7□□□□□ -0.54
COLCA1-203ENST00000532918 PRKAB2O43741 272 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 GPSM2P81274 684 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 SREBF2Q12772 1141 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 MCM6Q14566 821 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 CFAP221Q4G0U5 840 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 RCSD1Q6JBY9 416 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 PPP1R18Q6NYC8 613 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 NME8Q8N427 588 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 TTC1Q99614 292 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 OSBPL3Q9H4L5 887 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 LRRC4Q9HBW1 653 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 BZW2Q9Y6E2 419 aaKnown RBP11.69□□□□□ -0.54
COLCA1-203ENST00000532918 USP31Q70CQ4 1352 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 DENND3A2RUS2 1198 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 EIF3CLB5ME19 914 aaKnown RBP11.69□□□□□ -0.54
COLCA1-203ENST00000532918 ARHGAP6O43182 974 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 LIFRP42702 1097 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 PNOCQ13519 176 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 HS1BP3Q53T59 392 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 EIF3CQ99613 913 aaKnown RBP11.69□□□□□ -0.54
COLCA1-203ENST00000532918 IFIH1Q9BYX4 1025 aaKnown RBP11.69□□□□□ -0.54
COLCA1-203ENST00000532918 ALKQ9UM73 1620 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 PHKA2P46019 1235 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 TPD52P55327 224 aaPredicted RBP11.69□□□□□ -0.54
COLCA1-203ENST00000532918 FAM83BQ5T0W9 1011 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 FBXO18Q8NFZ0 1043 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 RNF139Q8WU17 664 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 GJA10Q969M2 543 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 LBHD1Q9BQE6 289 aaPredicted RBP11.69□□□□□ -0.54
COLCA1-203ENST00000532918 ACAD9Q9H845 621 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 PIH1D3Q9NQM4 214 aaKnown RBP11.69□□□□□ -0.54
COLCA1-203ENST00000532918 UTYO14607 1347 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 TAF1CQ15572 869 aaPredicted RBP11.69□□□□□ -0.54
COLCA1-203ENST00000532918 FAM173BQ6P4H8 233 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 KRBA2Q6ZNG9 492 aa11.69□□□□□ -0.54
COLCA1-203ENST00000532918 SYMPKQ92797 1274 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms