RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 C1orf53Q5VUE5 145 aa20.05■□□□□ 0.8
CTSB-223ENST00000532370 GLT1D1Q96MS3 346 aa20.05■□□□□ 0.8
CTSB-223ENST00000532370 LRRC37A2A6NM11 1700 aa20.05■□□□□ 0.8
CTSB-223ENST00000532370 PQBP1O60828 265 aaKnown RBP20.04■□□□□ 0.8
CTSB-223ENST00000532370 CCND2P30279 289 aa20.04■□□□□ 0.8
CTSB-223ENST00000532370 NAPAP54920 295 aa20.04■□□□□ 0.8
CTSB-223ENST00000532370 MRPS9P82933 396 aaKnown RBP20.04■□□□□ 0.8
CTSB-223ENST00000532370 STK3Q13188 491 aa20.04■□□□□ 0.8
CTSB-223ENST00000532370 BARHL2Q9NY43 387 aa20.04■□□□□ 0.8
CTSB-223ENST00000532370 RTEL1Q9NZ71 1219 aa20.04■□□□□ 0.8
CTSB-223ENST00000532370 DDX41Q9UJV9 622 aaKnown RBP20.04■□□□□ 0.8
CTSB-223ENST00000532370 ELP1O95163 1332 aa20.03■□□□□ 0.8
CTSB-223ENST00000532370 FRMPD4Q14CM0 1322 aa20.03■□□□□ 0.8
CTSB-223ENST00000532370 NKRFO15226 690 aaKnown RBP eCLIP20.03■□□□□ 0.8
CTSB-223ENST00000532370 ZEB2O60315 1214 aa20.03■□□□□ 0.8
CTSB-223ENST00000532370 PSMC6P62333 389 aa20.03■□□□□ 0.8
CTSB-223ENST00000532370 PKN1Q16512 942 aa20.03■□□□□ 0.8
CTSB-223ENST00000532370 PFKFB3Q16875 520 aaPredicted RBP20.03■□□□□ 0.8
CTSB-223ENST00000532370 SH3RF1Q7Z6J0 888 aa20.03■□□□□ 0.8
CTSB-223ENST00000532370 IL17RAQ96F46 866 aa20.03■□□□□ 0.8
CTSB-223ENST00000532370 MRVI1Q9Y6F6 885 aa20.03■□□□□ 0.8
CTSB-223ENST00000532370 LAMA3Q16787 3333 aa20.03■□□□□ 0.8
CTSB-223ENST00000532370 GRIN2DO15399 1336 aa20.02■□□□□ 0.8
CTSB-223ENST00000532370 PRPF3O43395 683 aaKnown RBP20.02■□□□□ 0.8
CTSB-223ENST00000532370 SORBS3O60504 671 aa20.02■□□□□ 0.8
CTSB-223ENST00000532370 MYL3P08590 195 aa20.02■□□□□ 0.8
CTSB-223ENST00000532370 ARHGAP1Q07960 439 aa20.02■□□□□ 0.8
CTSB-223ENST00000532370 AFG1LQ8WV93 481 aa20.02■□□□□ 0.8
CTSB-223ENST00000532370 ZNF274Q96GC6 653 aaPredicted RBP20.02■□□□□ 0.8
CTSB-223ENST00000532370 SLC26A6Q9BXS9 759 aa20.02■□□□□ 0.8
CTSB-223ENST00000532370 PRDM5Q9NQX1 630 aaPredicted RBP20.02■□□□□ 0.8
CTSB-223ENST00000532370 RBM27Q9P2N5 1060 aaKnown RBP20.02■□□□□ 0.8
CTSB-223ENST00000532370 ALPK3Q96L96 1907 aa20.02■□□□□ 0.79
CTSB-223ENST00000532370 TRIM43BA6NCK2 446 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 SMCO2A6NFE2 343 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 A6NJR5 290 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 ADAMTS3O15072 1205 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 GH1P01241 217 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 SCG2P13521 617 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 IFNAR1P17181 557 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 MAGEA10P43363 369 aaPredicted RBP20.01■□□□□ 0.79
CTSB-223ENST00000532370 CPT1AP50416 773 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 CDK7P50613 346 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 SP2Q02086 613 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 TRIM43Q96BQ3 446 aaPredicted RBP20.01■□□□□ 0.79
CTSB-223ENST00000532370 PRO3102Q9H379 93 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 BCAS3Q9H6U6 928 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 RIC8AQ9NPQ8 531 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 PDLIM7Q9NR12 457 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 TPCN1Q9ULQ1 816 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 PCDHA6Q9UN73 950 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 PCDHA8Q9Y5H6 950 aa20.01■□□□□ 0.79
CTSB-223ENST00000532370 A0A0U1RQG5 324 aaPredicted RBP20■□□□□ 0.79
CTSB-223ENST00000532370 ARVCFO00192 962 aa20■□□□□ 0.79
CTSB-223ENST00000532370 EIF5BO60841 1220 aaKnown RBP20■□□□□ 0.79
CTSB-223ENST00000532370 DTNBO60941 627 aa20■□□□□ 0.79
CTSB-223ENST00000532370 ADCY7P51828 1080 aa20■□□□□ 0.79
CTSB-223ENST00000532370 AK2P54819 239 aa20■□□□□ 0.79
CTSB-223ENST00000532370 PURAQ00577 322 aaKnown RBP20■□□□□ 0.79
CTSB-223ENST00000532370 MDM2Q00987 491 aaPredicted RBP20■□□□□ 0.79
CTSB-223ENST00000532370 FAAP100Q0VG06 881 aa20■□□□□ 0.79
CTSB-223ENST00000532370 PCNX4Q63HM2 1172 aa20■□□□□ 0.79
CTSB-223ENST00000532370 PPP1R18Q6NYC8 613 aa20■□□□□ 0.79
CTSB-223ENST00000532370 ANKRD33Q7Z3H0 272 aa20■□□□□ 0.79
CTSB-223ENST00000532370 PPP1R13LQ8WUF5 828 aa20■□□□□ 0.79
CTSB-223ENST00000532370 PGBD1Q96JS3 809 aa20■□□□□ 0.79
CTSB-223ENST00000532370 GDF15Q99988 308 aa20■□□□□ 0.79
CTSB-223ENST00000532370 ALDH8A1Q9H2A2 487 aaPredicted RBP20■□□□□ 0.79
CTSB-223ENST00000532370 MYH6P13533 1939 aa20■□□□□ 0.79
CTSB-223ENST00000532370 CABYRO75952 493 aa19.99■□□□□ 0.79
CTSB-223ENST00000532370 ITGB8P26012 769 aa19.99■□□□□ 0.79
CTSB-223ENST00000532370 SEMA3FQ13275 785 aa19.99■□□□□ 0.79
CTSB-223ENST00000532370 ITGA7Q13683 1181 aa19.99■□□□□ 0.79
CTSB-223ENST00000532370 SLC43A3Q8NBI5 491 aa19.99■□□□□ 0.79
CTSB-223ENST00000532370 INPP4AQ96PE3 977 aaPredicted RBP19.99■□□□□ 0.79
CTSB-223ENST00000532370 TMEM260Q9NX78 707 aa19.99■□□□□ 0.79
CTSB-223ENST00000532370 SPDYE3A6NKU9 549 aa19.98■□□□□ 0.79
CTSB-223ENST00000532370 hCG_1984214I3L0E3 225 aa19.98■□□□□ 0.79
CTSB-223ENST00000532370 MMP3P08254 477 aa19.98■□□□□ 0.79
CTSB-223ENST00000532370 CLTBP09497 229 aa19.98■□□□□ 0.79
CTSB-223ENST00000532370 UBA1P22314 1058 aaKnown RBP19.98■□□□□ 0.79
CTSB-223ENST00000532370 AKAP17AQ02040 695 aaKnown RBP19.98■□□□□ 0.79
CTSB-223ENST00000532370 SCRN1Q12765 414 aa19.98■□□□□ 0.79
CTSB-223ENST00000532370 BRDTQ58F21 947 aaPredicted RBP19.98■□□□□ 0.79
CTSB-223ENST00000532370 HABP4Q5JVS0 413 aaKnown RBP19.98■□□□□ 0.79
CTSB-223ENST00000532370 CELF3Q5SZQ8 465 aaKnown RBP19.98■□□□□ 0.79
CTSB-223ENST00000532370 DHX37Q8IY37 1157 aaKnown RBP19.98■□□□□ 0.79
CTSB-223ENST00000532370 ZNF713Q8N859 430 aaPredicted RBP19.98■□□□□ 0.79
CTSB-223ENST00000532370 TOX2Q96NM4 488 aa19.98■□□□□ 0.79
CTSB-223ENST00000532370 RNF26Q9BY78 433 aaPredicted RBP19.98■□□□□ 0.79
CTSB-223ENST00000532370 POLR3EQ9NVU0 708 aa19.98■□□□□ 0.79
CTSB-223ENST00000532370 PRKAG2Q9UGJ0 569 aa19.98■□□□□ 0.79
CTSB-223ENST00000532370 DCDC2CA8MYV0 355 aa19.97■□□□□ 0.79
CTSB-223ENST00000532370 SPATA31C2B4DYI2 1134 aa19.97■□□□□ 0.79
CTSB-223ENST00000532370 CPLX1O14810 134 aa19.97■□□□□ 0.79
CTSB-223ENST00000532370 GGPS1O95749 300 aa19.97■□□□□ 0.79
CTSB-223ENST00000532370 NEK4P51957 841 aa19.97■□□□□ 0.79
CTSB-223ENST00000532370 LAMC2Q13753 1193 aa19.97■□□□□ 0.79
CTSB-223ENST00000532370 MYSM1Q5VVJ2 828 aa19.97■□□□□ 0.79
CTSB-223ENST00000532370 XRRA1Q6P2D8 792 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms