RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 LDHAP00338 332 aaKnown RBP12.84□□□□□ -0.35
CSRP1-215ENST00000532313 MCM3P25205 808 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 KRT83P78385 493 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.84□□□□□ -0.35
CSRP1-215ENST00000532313 PSPC1Q8WXF1 523 aaKnown RBP12.84□□□□□ -0.35
CSRP1-215ENST00000532313 PGBD4Q96DM1 585 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 MAK16Q9BXY0 300 aaKnown RBP12.84□□□□□ -0.35
CSRP1-215ENST00000532313 SLIT3O75094 1523 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 CARNS1A5YM72 827 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 MAGEB2O15479 319 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 POLR2BP30876 1174 aaKnown RBP12.84□□□□□ -0.35
CSRP1-215ENST00000532313 PPIL2Q13356 520 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 LUZP1Q86V48 1076 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 CSGALNACT2Q8N6G5 542 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 SMARCAD1Q9H4L7 1026 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 C1orf112Q9NSG2 853 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 TPCN1Q9ULQ1 816 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 PAK1Q13153 545 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 CCDC84Q86UT8 332 aaPredicted RBP12.84□□□□□ -0.35
CSRP1-215ENST00000532313 CPLX3Q8WVH0 158 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 RRN3P2A6NIE6 340 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 ANXA13P27216 316 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 LAMC2Q13753 1193 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 CCDC14Q49A88 953 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 DYMQ7RTS9 669 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 POMGNT1Q8WZA1 660 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 PRMT6Q96LA8 375 aaPredicted RBP12.84□□□□□ -0.35
CSRP1-215ENST00000532313 NOC4LQ9BVI4 516 aaKnown RBP12.84□□□□□ -0.35
CSRP1-215ENST00000532313 SELENOOQ9BVL4 669 aa12.84□□□□□ -0.35
CSRP1-215ENST00000532313 GSG1L2A8MUP6 293 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 POLR2DO15514 142 aaKnown RBP12.83□□□□□ -0.36
CSRP1-215ENST00000532313 STK10O94804 968 aaKnown RBP12.83□□□□□ -0.36
CSRP1-215ENST00000532313 THEM5Q8N1Q8 247 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 NUP58Q9BVL2 599 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 APOL6Q9BWW8 343 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 PROCA1Q8NCQ7 364 aaPredicted RBP12.83□□□□□ -0.36
CSRP1-215ENST00000532313 PI4K2BQ8TCG2 481 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 ZNF830Q96NB3 372 aaPredicted RBP12.83□□□□□ -0.36
CSRP1-215ENST00000532313 SNX25Q9H3E2 840 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 PANK4Q9NVE7 773 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 TRIM17Q9Y577 477 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 STXBP3O00186 592 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 DAPK3O43293 454 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 MMS19Q96T76 1030 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 NDUFB10O96000 172 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 GSPT1P15170 499 aaKnown RBP12.83□□□□□ -0.36
CSRP1-215ENST00000532313 TNFAIP3P21580 790 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 SMARCA1P28370 1054 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 QRICH1Q2TAL8 776 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 FBXO18Q8NFZ0 1043 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 GDPD2Q9HCC8 539 aa12.83□□□□□ -0.36
CSRP1-215ENST00000532313 STAG3L1P0CL83 205 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 PRMT2P55345 433 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 RAPGEF1Q13905 1077 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 ZNF589Q86UQ0 364 aaPredicted RBP12.82□□□□□ -0.36
CSRP1-215ENST00000532313 PRELPP51888 382 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 BPIFB4P59827 614 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 MRPS9P82933 396 aaKnown RBP12.82□□□□□ -0.36
CSRP1-215ENST00000532313 UBXN1Q04323 297 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 TWF2Q6IBS0 349 aaKnown RBP12.82□□□□□ -0.36
CSRP1-215ENST00000532313 DYNC1LI2O43237 492 aaPredicted RBP12.82□□□□□ -0.36
CSRP1-215ENST00000532313 SKIP12755 728 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 HOXA13P31271 388 aaPredicted RBP12.82□□□□□ -0.36
CSRP1-215ENST00000532313 USP11P51784 963 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 DGKDQ16760 1214 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 SESTD1Q86VW0 696 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 SPZ1Q9BXG8 430 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 STK36Q9NRP7 1315 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 ANKFY1Q9P2R3 1169 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 KIAA1024Q9UPX6 916 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 CYP4A11Q02928 519 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 FAM26FQ5R3K3 315 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 KIAA1524Q8TCG1 905 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 CCDC42Q96M95 316 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 KIAA1586Q9HCI6 787 aa12.82□□□□□ -0.36
CSRP1-215ENST00000532313 AHDC1Q5TGY3 1603 aaPredicted RBP12.81□□□□□ -0.36
CSRP1-215ENST00000532313 MAPK6Q16659 721 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 KLHL40Q2TBA0 621 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 CFAP58Q5T655 872 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 PRAMEF18Q5VWM3 479 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 ANKRD13CQ8N6S4 541 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 CSRNP2Q9H175 543 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 ISM2Q6H9L7 571 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 ARMCX2Q7L311 632 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 CMTR1Q8N1G2 835 aaKnown RBP12.81□□□□□ -0.36
CSRP1-215ENST00000532313 RPF1Q9H9Y2 349 aaKnown RBP12.81□□□□□ -0.36
CSRP1-215ENST00000532313 HMX1Q9NP08 348 aaPredicted RBP12.81□□□□□ -0.36
CSRP1-215ENST00000532313 SLC12A6Q9UHW9 1150 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 K7ERI5 159 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 PDHXO00330 501 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 TRAPPC3O43617 180 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 TOMM70O94826 608 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 XRCC5P13010 732 aaKnown RBP12.81□□□□□ -0.36
CSRP1-215ENST00000532313 GNASQ5JWF2 1037 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 ARL6IP4Q66PJ3 421 aaKnown RBP12.81□□□□□ -0.36
CSRP1-215ENST00000532313 MAP3K14Q99558 947 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 SLC9A2Q9UBY0 812 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 SLC8A2Q9UPR5 921 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 HOXA2O43364 376 aa12.81□□□□□ -0.36
CSRP1-215ENST00000532313 TRPA1O75762 1119 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms