RNA–Protein interactions for RNA: ENST00000531919.1

PATL1-202, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

TSL 5

Gene PATL1, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-202ENST00000531919 SF3A1Q15459 793 aaKnown RBP4.33□□□□□ -1.72
PATL1-202ENST00000531919 TEX2Q8IWB9 1127 aa4.33□□□□□ -1.72
PATL1-202ENST00000531919 PANK1Q8TE04 598 aa4.33□□□□□ -1.72
PATL1-202ENST00000531919 SEC14L1Q92503 715 aa4.33□□□□□ -1.72
PATL1-202ENST00000531919 TRMT2BQ96GJ1 504 aaKnown RBP4.33□□□□□ -1.72
PATL1-202ENST00000531919 TMEM169Q96HH4 297 aa4.33□□□□□ -1.72
PATL1-202ENST00000531919 AP5M1Q9H0R1 490 aa4.33□□□□□ -1.72
PATL1-202ENST00000531919 RXFP1Q9HBX9 757 aa4.33□□□□□ -1.72
PATL1-202ENST00000531919 TRAV20A0A0B4J274 112 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 SGSM2O43147 1006 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 PRODHO43272 600 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 LCP1P13796 627 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 AFF3P51826 1226 aaKnown RBP4.32□□□□□ -1.72
PATL1-202ENST00000531919 CACNB2Q08289 660 aaPredicted RBP4.32□□□□□ -1.72
PATL1-202ENST00000531919 SERINC3Q13530 473 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 CHRNA2Q15822 529 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 LONRF2Q1L5Z9 754 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 NSMFQ6X4W1 530 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 DPH6Q7L8W6 267 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 B3GNT8Q7Z7M8 397 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 DCAF4Q8WV16 495 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 OSBP2Q969R2 916 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 MKL1Q969V6 931 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 PWWP2AQ96N64 755 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 SPATA9Q9BWV2 254 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 BTG4Q9NY30 223 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 PLA2G2DQ9UNK4 145 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 PCDHA2Q9Y5H9 948 aa4.32□□□□□ -1.72
PATL1-202ENST00000531919 FPR2P25090 351 aa4.31□□□□□ -1.72
PATL1-202ENST00000531919 PMLP29590 882 aa4.31□□□□□ -1.72
PATL1-202ENST00000531919 MTERF2Q49AM1 385 aa4.31□□□□□ -1.72
PATL1-202ENST00000531919 SPATC1Q76KD6 591 aa4.31□□□□□ -1.72
PATL1-202ENST00000531919 NLRP10Q86W26 655 aa4.31□□□□□ -1.72
PATL1-202ENST00000531919 SCUBE1Q8IWY4 988 aa4.31□□□□□ -1.72
PATL1-202ENST00000531919 CHAMP1Q96JM3 812 aa4.31□□□□□ -1.72
PATL1-202ENST00000531919 ZFYVE21Q9BQ24 234 aa4.31□□□□□ -1.72
PATL1-202ENST00000531919 CDIP1Q9H305 208 aa4.31□□□□□ -1.72
PATL1-202ENST00000531919 PCDH18Q9HCL0 1135 aa4.31□□□□□ -1.72
PATL1-202ENST00000531919 RAPGEFL1Q9UHV5 662 aa4.31□□□□□ -1.72
PATL1-202ENST00000531919 FAN1Q9Y2M0 1017 aa4.31□□□□□ -1.72
PATL1-202ENST00000531919 COA3Q9Y2R0 106 aaPredicted RBP4.31□□□□□ -1.72
PATL1-202ENST00000531919 SIT1Q9Y3P8 196 aa4.31□□□□□ -1.72
PATL1-202ENST00000531919 HGSO14964 777 aaPredicted RBP4.3□□□□□ -1.72
PATL1-202ENST00000531919 ADCY3O60266 1144 aa4.3□□□□□ -1.72
PATL1-202ENST00000531919 TADA3O75528 432 aa4.3□□□□□ -1.72
PATL1-202ENST00000531919 LIMS1P48059 325 aa4.3□□□□□ -1.72
PATL1-202ENST00000531919 HTRA3P83110 453 aa4.3□□□□□ -1.72
PATL1-202ENST00000531919 SSRP1Q08945 709 aaKnown RBP4.3□□□□□ -1.72
PATL1-202ENST00000531919 IFRD2Q12894 506 aaPredicted RBP4.3□□□□□ -1.72
PATL1-202ENST00000531919 EMC4Q5J8M3 183 aa4.3□□□□□ -1.72
PATL1-202ENST00000531919 STYK1Q6J9G0 422 aa4.3□□□□□ -1.72
PATL1-202ENST00000531919 USP53Q70EK8 1073 aa4.3□□□□□ -1.72
PATL1-202ENST00000531919 MILR1Q7Z6M3 343 aa4.3□□□□□ -1.72
PATL1-202ENST00000531919 MIB1Q86YT6 1006 aa4.3□□□□□ -1.72
PATL1-202ENST00000531919 LINC01356Q8N9X3 169 aa4.3□□□□□ -1.72
PATL1-202ENST00000531919 MARCH10Q8NA82 808 aaPredicted RBP4.3□□□□□ -1.72
PATL1-202ENST00000531919 ZBTB38Q8NAP3 1195 aaPredicted RBP4.3□□□□□ -1.72
PATL1-202ENST00000531919 FNIP1Q8TF40 1166 aa4.3□□□□□ -1.72
PATL1-202ENST00000531919 EPB41L1Q9H4G0 881 aa4.3□□□□□ -1.72
PATL1-202ENST00000531919 NGRNQ9NPE2 291 aaKnown RBP4.3□□□□□ -1.72
PATL1-202ENST00000531919 CLDND1Q9NY35 253 aa4.3□□□□□ -1.72
PATL1-202ENST00000531919 FBXL7Q9UJT9 491 aa4.3□□□□□ -1.72
PATL1-202ENST00000531919 ZNF652Q9Y2D9 606 aa4.3□□□□□ -1.72
PATL1-202ENST00000531919 MSCO60682 206 aa4.29□□□□□ -1.72
PATL1-202ENST00000531919 DGKIO75912 1065 aa4.29□□□□□ -1.72
PATL1-202ENST00000531919 GPR85P60893 370 aa4.29□□□□□ -1.72
PATL1-202ENST00000531919 RASA3Q14644 834 aa4.29□□□□□ -1.72
PATL1-202ENST00000531919 NTRK3Q16288 839 aa4.29□□□□□ -1.72
PATL1-202ENST00000531919 ZC3H12BQ5HYM0 836 aaKnown RBP4.29□□□□□ -1.72
PATL1-202ENST00000531919 CYP4F22Q6NT55 531 aa4.29□□□□□ -1.72
PATL1-202ENST00000531919 LBX2Q6XYB7 198 aa4.29□□□□□ -1.72
PATL1-202ENST00000531919 ETV3LQ6ZN32 361 aa4.29□□□□□ -1.72
PATL1-202ENST00000531919 TTLL10Q6ZVT0 673 aa4.29□□□□□ -1.72
PATL1-202ENST00000531919 SAPCD2Q86UD0 394 aa4.29□□□□□ -1.72
PATL1-202ENST00000531919 IFNL3Q8IZI9 196 aa4.29□□□□□ -1.72
PATL1-202ENST00000531919 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.29□□□□□ -1.72
PATL1-202ENST00000531919 SREK1Q8WXA9 508 aaKnown RBP4.29□□□□□ -1.72
PATL1-202ENST00000531919 PHF20Q9BVI0 1012 aa4.29□□□□□ -1.72
PATL1-202ENST00000531919 BCAS3Q9H6U6 928 aa4.29□□□□□ -1.72
PATL1-202ENST00000531919 PALD1Q9ULE6 856 aa4.29□□□□□ -1.72
PATL1-202ENST00000531919 PMF1-BGLAPU3KQ54 211 aa4.29□□□□□ -1.72
PATL1-202ENST00000531919 FAM221BA6H8Z2 402 aa4.28□□□□□ -1.72
PATL1-202ENST00000531919 CCDC85CA6NKD9 419 aa4.28□□□□□ -1.72
PATL1-202ENST00000531919 MAFKO60675 156 aa4.28□□□□□ -1.72
PATL1-202ENST00000531919 PLA2G1BP04054 148 aaKnown RBP4.28□□□□□ -1.72
PATL1-202ENST00000531919 BMP7P18075 431 aa4.28□□□□□ -1.72
PATL1-202ENST00000531919 MC3RP41968 323 aa4.28□□□□□ -1.72
PATL1-202ENST00000531919 KIZQ2M2Z5 673 aa4.28□□□□□ -1.72
PATL1-202ENST00000531919 VWA3BQ502W6 1294 aa4.28□□□□□ -1.72
PATL1-202ENST00000531919 YOD1Q5VVQ6 348 aaPredicted RBP4.28□□□□□ -1.72
PATL1-202ENST00000531919 STEAP3Q658P3 488 aa4.28□□□□□ -1.72
PATL1-202ENST00000531919 ZC3H18Q86VM9 953 aaKnown RBP4.28□□□□□ -1.72
PATL1-202ENST00000531919 FAM126BQ8IXS8 530 aa4.28□□□□□ -1.72
PATL1-202ENST00000531919 LINC00482Q8N8I6 264 aa4.28□□□□□ -1.72
PATL1-202ENST00000531919 JMYQ8N9B5 988 aa4.28□□□□□ -1.72
PATL1-202ENST00000531919 SMARCC2Q8TAQ2 1214 aa4.28□□□□□ -1.72
PATL1-202ENST00000531919 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.28□□□□□ -1.72
PATL1-202ENST00000531919 PHOSPHO1Q8TCT1 267 aa4.28□□□□□ -1.72
PATL1-202ENST00000531919 IPO9Q96P70 1041 aaKnown RBP4.28□□□□□ -1.72
PATL1-202ENST00000531919 KCNC2Q96PR1 638 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms