RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 ZNF530Q6P9A1 599 aaPredicted RBP9.08□□□□□ -0.96
SVIP-204ENST00000530199 ACAD11Q709F0 780 aa9.08□□□□□ -0.96
SVIP-204ENST00000530199 SVOPQ8N4V2 548 aa9.08□□□□□ -0.96
SVIP-204ENST00000530199 SMG8Q8ND04 991 aaKnown RBP9.08□□□□□ -0.96
SVIP-204ENST00000530199 RNF214Q8ND24 703 aa9.08□□□□□ -0.96
SVIP-204ENST00000530199 CYP4F12Q9HCS2 524 aa9.08□□□□□ -0.96
SVIP-204ENST00000530199 TJP2Q9UDY2 1190 aa9.08□□□□□ -0.96
SVIP-204ENST00000530199 UPK3BL1B0FP48 263 aa9.07□□□□□ -0.96
SVIP-204ENST00000530199 B2RBV5 119 aa9.07□□□□□ -0.96
SVIP-204ENST00000530199 UPK3BL2E5RIL1 263 aa9.07□□□□□ -0.96
SVIP-204ENST00000530199 ENPP3O14638 875 aa9.07□□□□□ -0.96
SVIP-204ENST00000530199 CAMTA2O94983 1202 aa9.07□□□□□ -0.96
SVIP-204ENST00000530199 STARD3NLO95772 234 aa9.07□□□□□ -0.96
SVIP-204ENST00000530199 ADH5P11766 374 aa9.07□□□□□ -0.96
SVIP-204ENST00000530199 NCLP19338 710 aaKnown RBP9.07□□□□□ -0.96
SVIP-204ENST00000530199 IL6STP40189 918 aaPredicted RBP9.07□□□□□ -0.96
SVIP-204ENST00000530199 IGF2-ASQ6U949 168 aa9.07□□□□□ -0.96
SVIP-204ENST00000530199 SLFN12Q8IYM2 578 aa9.07□□□□□ -0.96
SVIP-204ENST00000530199 LILRB2Q8N423 598 aa9.07□□□□□ -0.96
SVIP-204ENST00000530199 ZNF507Q8TCN5 953 aa9.07□□□□□ -0.96
SVIP-204ENST00000530199 ZNF333Q96JL9 665 aa9.07□□□□□ -0.96
SVIP-204ENST00000530199 TMEM87BQ96K49 555 aa9.07□□□□□ -0.96
SVIP-204ENST00000530199 ATXN3LQ9H3M9 355 aa9.07□□□□□ -0.96
SVIP-204ENST00000530199 CNOT7Q9UIV1 285 aaKnown RBP9.07□□□□□ -0.96
SVIP-204ENST00000530199 SPDYE3A6NKU9 549 aa9.06□□□□□ -0.96
SVIP-204ENST00000530199 H7C1D1 291 aa9.06□□□□□ -0.96
SVIP-204ENST00000530199 GNB5O14775 395 aa9.06□□□□□ -0.96
SVIP-204ENST00000530199 TRIM28Q13263 835 aaKnown RBP9.06□□□□□ -0.96
SVIP-204ENST00000530199 CRY2Q49AN0 593 aa9.06□□□□□ -0.96
SVIP-204ENST00000530199 NBPF5PQ86XG9 351 aaPredicted RBP9.06□□□□□ -0.96
SVIP-204ENST00000530199 HID1Q8IV36 788 aa9.06□□□□□ -0.96
SVIP-204ENST00000530199 MRPL41Q8IXM3 137 aaKnown RBP9.06□□□□□ -0.96
SVIP-204ENST00000530199 DEFB123Q8N688 67 aa9.06□□□□□ -0.96
SVIP-204ENST00000530199 FAM13CQ8NE31 585 aa9.06□□□□□ -0.96
SVIP-204ENST00000530199 SH3TC2Q8TF17 1288 aa9.06□□□□□ -0.96
SVIP-204ENST00000530199 FAM122AQ96E09 287 aa9.06□□□□□ -0.96
SVIP-204ENST00000530199 MRPL18Q9H0U6 180 aaKnown RBP9.06□□□□□ -0.96
SVIP-204ENST00000530199 PHAXQ9H814 394 aaKnown RBP9.06□□□□□ -0.96
SVIP-204ENST00000530199 SLC52A2Q9HAB3 445 aa9.06□□□□□ -0.96
SVIP-204ENST00000530199 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.06□□□□□ -0.96
SVIP-204ENST00000530199 AP4E1Q9UPM8 1137 aa9.06□□□□□ -0.96
SVIP-204ENST00000530199 ADM5C9JUS6 153 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 PPIP5K2O43314 1243 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 ARHGEF15O94989 841 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 NEFMP07197 916 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 ELNP15502 786 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 RAG1P15918 1043 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 YARSP54577 528 aaKnown RBP9.05□□□□□ -0.96
SVIP-204ENST00000530199 CHMP4BP1P59074 171 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 SOX4Q06945 474 aaPredicted RBP9.05□□□□□ -0.96
SVIP-204ENST00000530199 TNIP1Q15025 636 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 C1orf141Q5JVX7 400 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 SLC6A19Q695T7 634 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 MRM1Q6IN84 353 aaKnown RBP9.05□□□□□ -0.96
SVIP-204ENST00000530199 VHLLQ6RSH7 139 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 CLEC4GQ6UXB4 293 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.05□□□□□ -0.96
SVIP-204ENST00000530199 DPF2Q92785 391 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 DCPSQ96C86 337 aaKnown RBP9.05□□□□□ -0.96
SVIP-204ENST00000530199 R3HDMLQ9H3Y0 253 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 KANSL2Q9H9L4 492 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 FBRSQ9HAH7 460 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 MTMR10Q9NXD2 777 aa9.05□□□□□ -0.96
SVIP-204ENST00000530199 FAM86C2PA6NEL3 165 aa9.04□□□□□ -0.96
SVIP-204ENST00000530199 FAM229AH3BQW9 127 aa9.04□□□□□ -0.96
SVIP-204ENST00000530199 TIAF1O95411 115 aa9.04□□□□□ -0.96
SVIP-204ENST00000530199 DRD2P14416 443 aa9.04□□□□□ -0.96
SVIP-204ENST00000530199 SREBF2Q12772 1141 aa9.04□□□□□ -0.96
SVIP-204ENST00000530199 EIF4A2Q14240 407 aaKnown RBP9.04□□□□□ -0.96
SVIP-204ENST00000530199 TTLL4Q14679 1199 aa9.04□□□□□ -0.96
SVIP-204ENST00000530199 NCAPHQ15003 741 aa9.04□□□□□ -0.96
SVIP-204ENST00000530199 NKG7Q16617 165 aa9.04□□□□□ -0.96
SVIP-204ENST00000530199 AOC3Q16853 763 aa9.04□□□□□ -0.96
SVIP-204ENST00000530199 MTERF2Q49AM1 385 aa9.04□□□□□ -0.96
SVIP-204ENST00000530199 ST13P5Q8NFI4 369 aaPredicted RBP9.04□□□□□ -0.96
SVIP-204ENST00000530199 GSX1Q9H4S2 264 aaPredicted RBP9.04□□□□□ -0.96
SVIP-204ENST00000530199 ZNF609O15014 1411 aa9.04□□□□□ -0.96
SVIP-204ENST00000530199 LAMB4A4D0S4 1761 aa9.04□□□□□ -0.96
SVIP-204ENST00000530199 KIF7Q2M1P5 1343 aa9.04□□□□□ -0.96
SVIP-204ENST00000530199 KIF20BQ96Q89 1820 aa9.03□□□□□ -0.96
SVIP-204ENST00000530199 PIK3R2O00459 728 aa9.03□□□□□ -0.96
SVIP-204ENST00000530199 PPM1GO15355 546 aaPredicted RBP9.03□□□□□ -0.96
SVIP-204ENST00000530199 CLSTN1O94985 981 aa9.03□□□□□ -0.96
SVIP-204ENST00000530199 HCLS1P14317 486 aaPredicted RBP9.03□□□□□ -0.96
SVIP-204ENST00000530199 POLR2BP30876 1174 aaKnown RBP9.03□□□□□ -0.96
SVIP-204ENST00000530199 HOXA10P31260 410 aaPredicted RBP9.03□□□□□ -0.96
SVIP-204ENST00000530199 CCNFP41002 786 aa9.03□□□□□ -0.96
SVIP-204ENST00000530199 DYMQ7RTS9 669 aa9.03□□□□□ -0.96
SVIP-204ENST00000530199 C12orf50Q8NA57 414 aaPredicted RBP9.03□□□□□ -0.96
SVIP-204ENST00000530199 KCT2Q8NC54 265 aa9.03□□□□□ -0.96
SVIP-204ENST00000530199 DPF3Q92784 378 aa9.03□□□□□ -0.96
SVIP-204ENST00000530199 ERO1AQ96HE7 468 aa9.03□□□□□ -0.96
SVIP-204ENST00000530199 RTFDC1Q9BY42 306 aaPredicted RBP9.03□□□□□ -0.96
SVIP-204ENST00000530199 MKL2Q9ULH7 1088 aa9.03□□□□□ -0.96
SVIP-204ENST00000530199 PCDHB10Q9UN67 800 aa9.03□□□□□ -0.96
SVIP-204ENST00000530199 TTC28Q96AY4 2481 aa9.03□□□□□ -0.96
SVIP-204ENST00000530199 POLR2AP24928 1970 aaKnown RBP9.03□□□□□ -0.96
SVIP-204ENST00000530199 EYSQ5T1H1 3165 aa9.02□□□□□ -0.96
SVIP-204ENST00000530199 KDM3BQ7LBC6 1761 aa9.02□□□□□ -0.97
SVIP-204ENST00000530199 UBR2Q8IWV8 1755 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms