RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 PDE4BQ07343 736 aa10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 GPNMBQ14956 572 aa10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 DUSP28Q4G0W2 176 aa10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 ADGRD1Q6QNK2 874 aa10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 SLC30A10Q6XR72 485 aa10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 TMCO2Q7Z6W1 182 aaPredicted RBP10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 SMC5Q8IY18 1101 aa10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 COPS5Q92905 334 aa10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 NAPBQ9H115 298 aa10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 MTIF3Q9H2K0 278 aaKnown RBP10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 RANBP17Q9H2T7 1088 aaKnown RBP10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 EPHX3Q9H6B9 360 aa10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 VTA1Q9NP79 307 aa10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 CCPG1Q9ULG6 757 aa10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 PRRC2BQ5JSZ5 2229 aaKnown RBP10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 BDP1A6H8Y1 2624 aa10.08□□□□□ -0.8
TGFBR3-208ENST00000529608 RBM47A0AV96 593 aaKnown RBP10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 TK2O00142 265 aa10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 ICAM1P05362 532 aa10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 MYL3P08590 195 aa10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 POU3F3P20264 500 aaPredicted RBP10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 PLA2G5P39877 138 aa10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 TAP1Q03518 808 aa10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 NBR1Q14596 966 aa10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 TCTN1Q2MV58 587 aa10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 NBPF20Q3BBV1 942 aa10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 C8orf34Q49A92 452 aa10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 RPUSD2Q8IZ73 545 aaKnown RBP10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 CLEC4DQ8WXI8 215 aa10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 CTAGE1Q96RT6 745 aa10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 WDR11Q9BZH6 1224 aa10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 ZNF287Q9HBT7 754 aa10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 FRMPD2Q68DX3 1309 aaPredicted RBP10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 SALL3Q9BXA9 1300 aa10.07□□□□□ -0.8
TGFBR3-208ENST00000529608 KIAA1217Q5T5P2 1943 aa10.06□□□□□ -0.8
TGFBR3-208ENST00000529608 LCHNA4D1U4 455 aa10.06□□□□□ -0.8
TGFBR3-208ENST00000529608 TSPY2A6NKD2 308 aa10.06□□□□□ -0.8
TGFBR3-208ENST00000529608 ERC2O15083 957 aa10.06□□□□□ -0.8
TGFBR3-208ENST00000529608 TLL1O43897 1013 aa10.06□□□□□ -0.8
TGFBR3-208ENST00000529608 ZEB2O60315 1214 aa10.06□□□□□ -0.8
TGFBR3-208ENST00000529608 LPXNO60711 386 aa10.06□□□□□ -0.8
TGFBR3-208ENST00000529608 ARIH2O95376 493 aa10.06□□□□□ -0.8
TGFBR3-208ENST00000529608 IQCF3P0C7M6 154 aa10.06□□□□□ -0.8
TGFBR3-208ENST00000529608 TMEM67Q5HYA8 995 aa10.06□□□□□ -0.8
TGFBR3-208ENST00000529608 BTNL9Q6UXG8 535 aa10.06□□□□□ -0.8
TGFBR3-208ENST00000529608 SKAP1Q86WV1 359 aa10.06□□□□□ -0.8
TGFBR3-208ENST00000529608 OR6J1Q8NGC5 347 aa10.06□□□□□ -0.8
TGFBR3-208ENST00000529608 PTPDC1A2A3K4 754 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 GRXCR2A6NFK2 248 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 HRO43593 1189 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 RANBP6O60518 1105 aaKnown RBP10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 FGRP09769 529 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 EDNRBP24530 442 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 CALML3P27482 149 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 GRB10Q13322 594 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 SKIV2LQ15477 1246 aaKnown RBP10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 CCDC96Q2M329 555 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 FAM47CQ5HY64 1035 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 SYDE2Q5VT97 1194 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 HERC6Q8IVU3 1022 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 ARNTL2Q8WYA1 636 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 TMEM47Q9BQJ4 181 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 MTG1Q9BT17 334 aaPredicted RBP10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 LRFN3Q9BTN0 628 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 ZBED2Q9BTP6 218 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 FSD1Q9BTV5 496 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 SEZ6LQ9BYH1 1024 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 NACAP1Q9BZK3 213 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 CPVLQ9H3G5 476 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 GPCPD1Q9NPB8 672 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 CD320Q9NPF0 282 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 C11orf16Q9NQ32 467 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 POLR3EQ9NVU0 708 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 ANAPC4Q9UJX5 808 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 SIP14410 1827 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 TTC41PQ6P2S7 1318 aa10.05□□□□□ -0.8
TGFBR3-208ENST00000529608 A6NJR5 290 aa10.04□□□□□ -0.8
TGFBR3-208ENST00000529608 PPP1R3GB7ZBB8 358 aa10.04□□□□□ -0.8
TGFBR3-208ENST00000529608 PFKMP08237 780 aa10.04□□□□□ -0.8
TGFBR3-208ENST00000529608 SUPT20HL2P0C7V6 817 aa10.04□□□□□ -0.8
TGFBR3-208ENST00000529608 CPT1AP50416 773 aa10.04□□□□□ -0.8
TGFBR3-208ENST00000529608 RPS6P62753 249 aaKnown RBP10.04□□□□□ -0.8
TGFBR3-208ENST00000529608 C6orf132Q5T0Z8 1188 aa10.04□□□□□ -0.8
TGFBR3-208ENST00000529608 IL27Q8NEV9 243 aa10.04□□□□□ -0.8
TGFBR3-208ENST00000529608 DCAF4Q8WV16 495 aa10.04□□□□□ -0.8
TGFBR3-208ENST00000529608 TBC1D5Q92609 795 aa10.04□□□□□ -0.8
TGFBR3-208ENST00000529608 DHX38Q92620 1227 aaKnown RBP10.04□□□□□ -0.8
TGFBR3-208ENST00000529608 GPATCH3Q96I76 525 aa10.04□□□□□ -0.8
TGFBR3-208ENST00000529608 SLC9A7Q96T83 725 aa10.04□□□□□ -0.8
TGFBR3-208ENST00000529608 SLC4A5Q9BY07 1137 aa10.04□□□□□ -0.8
TGFBR3-208ENST00000529608 VPS9D1Q9Y2B5 631 aa10.04□□□□□ -0.8
TGFBR3-208ENST00000529608 MYH7BA7E2Y1 1941 aa10.03□□□□□ -0.8
TGFBR3-208ENST00000529608 ORC4O43929 436 aa10.03□□□□□ -0.8
TGFBR3-208ENST00000529608 SLC3A2P08195 630 aaKnown RBP10.03□□□□□ -0.8
TGFBR3-208ENST00000529608 PDHBP11177 359 aa10.03□□□□□ -0.8
TGFBR3-208ENST00000529608 DEFB103AP81534 67 aa10.03□□□□□ -0.8
TGFBR3-208ENST00000529608 NUCB1Q02818 461 aa10.03□□□□□ -0.8
TGFBR3-208ENST00000529608 GDF6Q6KF10 455 aaPredicted RBP10.03□□□□□ -0.8
TGFBR3-208ENST00000529608 NFRKBQ6P4R8 1299 aa10.03□□□□□ -0.8
TGFBR3-208ENST00000529608 RNF207Q6ZRF8 634 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms