RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 TERF2Q15554 542 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 KIZQ2M2Z5 673 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 RRP12Q5JTH9 1297 aaKnown RBP4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 EFCAB2Q5VUJ9 269 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 IQCEQ6IPM2 695 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 C16orf59Q7L2K0 433 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 OTOP1Q7RTM1 612 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 RASSF3Q86WH2 238 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 CMIPQ8IY22 773 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 NME8Q8N427 588 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 C2orf69Q8N8R5 385 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 EDARADDQ8WWZ3 215 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 DIO2Q92813 273 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 PSMG3-AS1Q96PY0 264 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 C1orf112Q9NSG2 853 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 KLHL11Q9NVR0 708 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 ANAPC4Q9UJX5 808 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 PHTF1Q9UMS5 762 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 MINPP1Q9UNW1 487 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 PTPN22Q9Y2R2 807 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 BACE2Q9Y5Z0 518 aa4.47□□□□□ -1.69
AMBRA1-208ENST00000529558 STXBP3O00186 592 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 NPHP1O15259 732 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 PMM2O15305 246 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 XPOTO43592 962 aaKnown RBP4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 CTNND1O60716 968 aaKnown RBP4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 ZRANB2O95218 330 aaKnown RBP eCLIP4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 PLS3P13797 630 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 CYP7A1P22680 504 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 CTSKP43235 329 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 NOP2P46087 812 aaKnown RBP4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 DNM2P50570 870 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 USP14P54578 494 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 SCAND1P57086 179 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 ST5P78524 1137 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 LACTBP83111 547 aaPredicted RBP4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 ADCY1Q08828 1119 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 FAM47CQ5HY64 1035 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 CWF19L1Q69YN2 538 aaKnown RBP4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 ACAD11Q709F0 780 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 AMOTL1Q8IY63 956 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 GALNT6Q8NCL4 622 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 LMBR1Q8WVP7 490 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 FBXW5Q969U6 566 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 ACDQ96AP0 544 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 FCRL3Q96P31 734 aaPredicted RBP4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 TAAR9Q96RI9 348 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 ACSS3Q9H6R3 686 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 NMRK2Q9NPI5 230 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 NLRC4Q9NPP4 1024 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 PLCB1Q9NQ66 1216 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 PRDM10Q9NQV6 1147 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 TOPORSQ9NS56 1045 aaPredicted RBP4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 BCCIPQ9P287 314 aaKnown RBP eCLIP4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 DNM3Q9UQ16 869 aa4.46□□□□□ -1.7
AMBRA1-208ENST00000529558 GOLGA8AA7E2F4 631 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 GOLGA8BA8MQT2 603 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 MEIS1O00470 390 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 AP1G1O43747 822 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 H2AFYO75367 372 aaKnown RBP4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 CD3EP07766 207 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 GRK2P25098 689 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 TRAPPC10P48553 1259 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 SEPHS1P49903 392 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 PHC1P78364 1004 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 IRX6P78412 446 aaPredicted RBP4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 KCNAB2Q13303 367 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 KRT72Q14CN4 511 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 TRAPPC3LQ5T215 181 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 IFIT1BQ5T764 474 aaKnown RBP4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 FDX2Q6P4F2 183 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 SMAP1Q8IYB5 467 aaPredicted RBP4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 IFNL2Q8IZJ0 200 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 RCBTB1Q8NDN9 531 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 ENOX1Q8TC92 643 aaKnown RBP4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 PANK1Q8TE04 598 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 TNIP3Q96KP6 325 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 TEKT5Q96M29 485 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 SENP7Q9BQF6 1050 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 HERPUD2Q9BSE4 406 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 NAA15Q9BXJ9 866 aaKnown RBP4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 IPPKQ9H8X2 491 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 GPATCH2Q9NW75 528 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 CLEC1BQ9P126 229 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 KCNH3Q9ULD8 1083 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 INVSQ9Y283 1065 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 NOC2LQ9Y3T9 749 aaKnown RBP4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 SPO11Q9Y5K1 396 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 PPP2R3BQ9Y5P8 575 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 CNTNAP4Q9C0A0 1308 aa4.45□□□□□ -1.7
AMBRA1-208ENST00000529558 FAM47E-STBD1D6RA91 191 aa4.44□□□□□ -1.7
AMBRA1-208ENST00000529558 RBAK-RBAKDNI3L0D1 243 aa4.44□□□□□ -1.7
AMBRA1-208ENST00000529558 OFD1O75665 1012 aa4.44□□□□□ -1.7
AMBRA1-208ENST00000529558 EOMESO95936 686 aa4.44□□□□□ -1.7
AMBRA1-208ENST00000529558 ZBTB48P10074 688 aaPredicted RBP4.44□□□□□ -1.7
AMBRA1-208ENST00000529558 IFNGR1P15260 489 aa4.44□□□□□ -1.7
AMBRA1-208ENST00000529558 RHCEP18577 417 aa4.44□□□□□ -1.7
AMBRA1-208ENST00000529558 LSP1P33241 339 aa4.44□□□□□ -1.7
AMBRA1-208ENST00000529558 HALP42357 657 aa4.44□□□□□ -1.7
AMBRA1-208ENST00000529558 AK2P54819 239 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms