RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 MIGA2Q7L4E1 593 aa8.86□□□□□ -0.99
CTNND1-220ENST00000529526 HAUS1Q96CS2 278 aa8.86□□□□□ -0.99
CTNND1-220ENST00000529526 NT5C1BQ96P26 610 aa8.86□□□□□ -0.99
CTNND1-220ENST00000529526 SMYD2Q9NRG4 433 aa8.86□□□□□ -0.99
CTNND1-220ENST00000529526 HOMER3Q9NSC5 361 aa8.86□□□□□ -0.99
CTNND1-220ENST00000529526 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.86□□□□□ -0.99
CTNND1-220ENST00000529526 UBN2Q6ZU65 1347 aa8.86□□□□□ -0.99
CTNND1-220ENST00000529526 PASKQ96RG2 1323 aa8.86□□□□□ -0.99
CTNND1-220ENST00000529526 AATKQ6ZMQ8 1374 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 TLR3O15455 904 aaKnown RBP8.85□□□□□ -0.99
CTNND1-220ENST00000529526 GFPT2O94808 682 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 CSPG5O95196 566 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 FTCDO95954 541 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 LMNB1P20700 586 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 EP400NLQ6ZTU2 488 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 FAM186BQ8IYM0 893 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 CNKSR1Q969H4 720 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 TYW1Q9NV66 732 aaKnown RBP8.85□□□□□ -0.99
CTNND1-220ENST00000529526 FOSP01100 380 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-220ENST00000529526 DYNLT1P63172 113 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 MUM1Q2TAK8 710 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 ARHGEF25Q86VW2 580 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 NLRP10Q86W26 655 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 LINC00301Q8NCQ3 95 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 ZNF653Q96CK0 615 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 OSBPL3Q9H4L5 887 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 SRP68Q9UHB9 627 aaKnown RBP8.85□□□□□ -0.99
CTNND1-220ENST00000529526 KDM5DQ9BY66 1539 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 GSTA1P08263 222 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 GSTA2P09210 222 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 MECOMQ03112 1051 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 EEPD1Q7L9B9 569 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 BCAS4Q8TDM0 211 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 RAB3IPQ96QF0 476 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-220ENST00000529526 BEGAINQ9BUH8 593 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 MAGEF1Q9HAY2 307 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 RNF8O76064 485 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 MAPK4P31152 587 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 HOXA13P31271 388 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-220ENST00000529526 IFNAR2P48551 515 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 PTPN12Q05209 780 aaKnown RBP8.85□□□□□ -0.99
CTNND1-220ENST00000529526 GPATCH4Q5T3I0 446 aaKnown RBP8.85□□□□□ -0.99
CTNND1-220ENST00000529526 FLAD1Q8NFF5 587 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 DHTKD1Q96HY7 919 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-220ENST00000529526 QTRT2Q9H974 415 aaKnown RBP8.85□□□□□ -0.99
CTNND1-220ENST00000529526 RIPOR2Q9Y4F9 1068 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 EFCAB6Q5THR3 1501 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 PSDA5PKW4 1024 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-220ENST00000529526 GOLGA8SH3BPF8 625 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 RAD17O75943 681 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 LIG3P49916 1009 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 OSTNP61366 133 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 CCDC38Q502W7 563 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 DPY19L2Q6NUT2 758 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 MAGOHBQ96A72 148 aaKnown RBP8.85□□□□□ -0.99
CTNND1-220ENST00000529526 ANKRD36BP1Q96IX9 119 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 EPB41L5Q9HCM4 733 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 SPTLC3Q9NUV7 552 aa8.85□□□□□ -0.99
CTNND1-220ENST00000529526 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-220ENST00000529526 ECE1P42892 770 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 RASSF2P50749 326 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 TFDP1Q14186 410 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 MIS18BP1Q6P0N0 1132 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 DPP9Q86TI2 863 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 SIRT2Q8IXJ6 389 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 ACCSQ96QU6 501 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 UBE2TQ9NPD8 197 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-220ENST00000529526 GCNT4Q9P109 453 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 NLRP1Q9C000 1473 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 INO80B-WBP1J3KQ70 363 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 CLGNO14967 610 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 PLCG1P19174 1290 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 POLR2BP30876 1174 aaKnown RBP8.84□□□□□ -0.99
CTNND1-220ENST00000529526 DDIT3P35638 169 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 TRAPPC10P48553 1259 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 KCTD2Q14681 263 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 SYDE2Q5VT97 1194 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.84□□□□□ -0.996e-14■□□□□ 9.9
CTNND1-220ENST00000529526 INO80BQ9C086 356 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-220ENST00000529526 CUEDC2Q9H467 287 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 CDC23Q9UJX2 597 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 SPATA31E1Q6ZUB1 1445 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 MYO1FO00160 1098 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 PLEKHA8P1O95397 391 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 MKRN3Q13064 507 aaKnown RBP8.84□□□□□ -0.99
CTNND1-220ENST00000529526 SKA2Q8WVK7 121 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-220ENST00000529526 PAGE5Q96GU1 130 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 CEP170P1Q96L14 293 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 ROBO2Q9HCK4 1378 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 USP6P35125 1406 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 ATP7BP35670 1465 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 SASH1O94885 1247 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 CCND2P30279 289 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 STAT2P52630 851 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 TRIP13Q15645 432 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-220ENST00000529526 AOC3Q16853 763 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 PDZD4Q76G19 769 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-220ENST00000529526 NLGN1Q8N2Q7 840 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 FAM71BQ8TC56 605 aa8.84□□□□□ -0.99
CTNND1-220ENST00000529526 LRRC8CQ8TDW0 803 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms