RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 TFRCP02786 760 aaKnown RBP8.34□□□□□ -1.07
ITGB1-218ENST00000528877 CCND3P30281 292 aaPredicted RBP8.34□□□□□ -1.07
ITGB1-218ENST00000528877 STAT3P40763 770 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 USP4Q13107 963 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 MAP7D1Q3KQU3 841 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 FAM47AQ5JRC9 791 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 B4GALNT3Q6L9W6 998 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 NECAB2Q7Z6G3 386 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 FAM160B2Q86V87 743 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 NCAPG2Q86XI2 1143 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 LRRC47Q8N1G4 583 aaKnown RBP8.34□□□□□ -1.07
ITGB1-218ENST00000528877 MSL3Q8N5Y2 521 aaKnown RBP8.34□□□□□ -1.07
ITGB1-218ENST00000528877 TRPV1Q8NER1 839 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 DIS3LQ8TF46 1054 aaKnown RBP8.34□□□□□ -1.07
ITGB1-218ENST00000528877 DSCC1Q9BVC3 393 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 PRO3102Q9H379 93 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 ZNF395Q9H8N7 513 aaPredicted RBP8.34□□□□□ -1.07
ITGB1-218ENST00000528877 IL17RBQ9NRM6 502 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 DDX20Q9UHI6 824 aaKnown RBP8.34□□□□□ -1.07
ITGB1-218ENST00000528877 FEM1BQ9UK73 627 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 DOLKQ9UPQ8 538 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 SZT2Q5T011 3432 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 LRRC37A2A6NM11 1700 aa8.34□□□□□ -1.07
ITGB1-218ENST00000528877 SYNGAP1Q96PV0 1343 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 TRIOBPQ9H2D6 2365 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 TSPY2A6NKD2 308 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 SOBPA7XYQ1 873 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 H0YGN5 161 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 SEPT4O43236 478 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 BMP3P12645 472 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 GSPT1P15170 499 aaKnown RBP8.33□□□□□ -1.08
ITGB1-218ENST00000528877 CYP2C19P33261 490 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 CTSOP43234 321 aaPredicted RBP8.33□□□□□ -1.08
ITGB1-218ENST00000528877 RNF144AP50876 292 aaPredicted RBP8.33□□□□□ -1.08
ITGB1-218ENST00000528877 STAT2P52630 851 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 PLS1Q14651 629 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 ZNF792Q3KQV3 632 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 AKNAD1Q5T1N1 836 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 TTC22Q5TAA0 569 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 SLFN13Q68D06 897 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 SNRNP48Q6IEG0 339 aaKnown RBP8.33□□□□□ -1.08
ITGB1-218ENST00000528877 RCSD1Q6JBY9 416 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 DPP9Q86TI2 863 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 TBC1D10CQ8IV04 446 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 STK11IPQ8N1F8 1099 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 RNF217Q8TC41 542 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 DCAF4Q8WV16 495 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 RILPL2Q969X0 211 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 PAWRQ96IZ0 340 aaKnown RBP8.33□□□□□ -1.08
ITGB1-218ENST00000528877 MMP19Q99542 508 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 RNF41Q9H4P4 317 aaPredicted RBP8.33□□□□□ -1.08
ITGB1-218ENST00000528877 C11orf49Q9H6J7 331 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 DIAPH3Q9NSV4 1193 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 FBXO40Q9UH90 709 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 PLXNA1Q9UIW2 1896 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 STX8Q9UNK0 236 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 NR2E3Q9Y5X4 410 aa8.33□□□□□ -1.08
ITGB1-218ENST00000528877 LAMA2P24043 3122 aaKnown RBP8.33□□□□□ -1.08
ITGB1-218ENST00000528877 ZNF536O15090 1300 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 NEDD4P46934 1319 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 A0A1W2PPC1 479 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 DNM1LO00429 736 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 TRAK2O60296 914 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 NMT2O60551 498 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 ZBED4O75132 1171 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 SNHG28P0DPA3 235 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 SLC1A4P43007 532 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 CLN3Q13286 438 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 KCTD2Q14681 263 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 HABP4Q5JVS0 413 aaKnown RBP8.32□□□□□ -1.08
ITGB1-218ENST00000528877 MAMDC4Q6UXC1 1216 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 BTNL9Q6UXG8 535 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 PHTF2Q8N3S3 785 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 KDF1Q8NAX2 398 aaPredicted RBP8.32□□□□□ -1.08
ITGB1-218ENST00000528877 CHST13Q8NET6 341 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 TTC14Q96N46 770 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 TINF2Q9BSI4 451 aa8.32□□□□□ -1.08
ITGB1-218ENST00000528877 FIGNL2A6NMB9 653 aa8.31□□□□□ -1.08
ITGB1-218ENST00000528877 TMEM232C9JQI7 657 aa8.31□□□□□ -1.08
ITGB1-218ENST00000528877 RANBP6O60518 1105 aaKnown RBP8.31□□□□□ -1.08
ITGB1-218ENST00000528877 VSIG8P0DPA2 414 aa8.31□□□□□ -1.08
ITGB1-218ENST00000528877 TOP1P11387 765 aaKnown RBP8.31□□□□□ -1.08
ITGB1-218ENST00000528877 PTSQ03393 145 aa8.31□□□□□ -1.08
ITGB1-218ENST00000528877 TKFCQ3LXA3 575 aa8.31□□□□□ -1.08
ITGB1-218ENST00000528877 CWC27Q6UX04 472 aaKnown RBP8.31□□□□□ -1.08
ITGB1-218ENST00000528877 MFSD6Q6ZSS7 791 aa8.31□□□□□ -1.08
ITGB1-218ENST00000528877 LYSMD3Q7Z3D4 306 aa8.31□□□□□ -1.08
ITGB1-218ENST00000528877 CHURC1Q8WUH1 139 aa8.31□□□□□ -1.08
ITGB1-218ENST00000528877 ESR2Q92731 530 aa8.31□□□□□ -1.08
ITGB1-218ENST00000528877 DPF3Q92784 378 aa8.31□□□□□ -1.08
ITGB1-218ENST00000528877 FGD4Q96M96 766 aa8.31□□□□□ -1.08
ITGB1-218ENST00000528877 INCENPQ9NQS7 918 aa8.31□□□□□ -1.08
ITGB1-218ENST00000528877 RIPK3Q9Y572 518 aa8.31□□□□□ -1.08
ITGB1-218ENST00000528877 A0A1W2PRU2 124 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 PPFIA3O75145 1194 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 PGK2P07205 417 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 ZNF865P0CJ78 1059 aaPredicted RBP8.3□□□□□ -1.08
ITGB1-218ENST00000528877 PDHBP11177 359 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 MCCP23508 829 aa8.3□□□□□ -1.08
ITGB1-218ENST00000528877 SCTRP47872 440 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms