RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 C3orf20Q8ND61 904 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 GPKOWQ92917 476 aaPredicted RBP eCLIP16.18■□□□□ 0.18
CAPN1-214ENST00000528165 TMOD3Q9NYL9 352 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 FTCDO95954 541 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 IBSPP21815 317 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-214ENST00000528165 TNNC1P63316 161 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 TRADDQ15628 312 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 CYB5D1Q6P9G0 228 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 LRIG3Q6UXM1 1119 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 LUC7LQ9NQ29 371 aaKnown RBP16.18■□□□□ 0.18
CAPN1-214ENST00000528165 PLCB1Q9NQ66 1216 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 DDX20Q9UHI6 824 aaKnown RBP16.18■□□□□ 0.18
CAPN1-214ENST00000528165 SSU72P8A0A1W2PR75 194 aa16.17■□□□□ 0.18
CAPN1-214ENST00000528165 KIF5BP33176 963 aa16.17■□□□□ 0.18
CAPN1-214ENST00000528165 RNASE9P60153 205 aaKnown RBP16.17■□□□□ 0.18
CAPN1-214ENST00000528165 AMPD3Q01432 767 aa16.17■□□□□ 0.18
CAPN1-214ENST00000528165 INF2Q27J81 1249 aa16.17■□□□□ 0.18
CAPN1-214ENST00000528165 ASTE1Q2TB18 679 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-214ENST00000528165 PDXDC1Q6P996 788 aa16.17■□□□□ 0.18
CAPN1-214ENST00000528165 TMC4Q7Z404 712 aa16.17■□□□□ 0.18
CAPN1-214ENST00000528165 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.17■□□□□ 0.18
CAPN1-214ENST00000528165 C7orf25Q9BPX7 421 aa16.17■□□□□ 0.18
CAPN1-214ENST00000528165 SEMA6BQ9H3T3 888 aa16.17■□□□□ 0.18
CAPN1-214ENST00000528165 LAD1O00515 517 aa16.17■□□□□ 0.18
CAPN1-214ENST00000528165 SSBP05455 408 aaKnown RBP eCLIP16.17■□□□□ 0.18
CAPN1-214ENST00000528165 PROSER2Q86WR7 435 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-214ENST00000528165 FUKQ8N0W3 1084 aa16.17■□□□□ 0.18
CAPN1-214ENST00000528165 BAP1Q92560 729 aa16.17■□□□□ 0.18
CAPN1-214ENST00000528165 BRIP1Q9BX63 1249 aa16.17■□□□□ 0.18
CAPN1-214ENST00000528165 TAF1DQ9H5J8 278 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-214ENST00000528165 SH3GLB2Q9NR46 395 aa16.17■□□□□ 0.18
CAPN1-214ENST00000528165 RAD51CO43502 376 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 FGFR1OPO95684 399 aaKnown RBP16.16■□□□□ 0.18
CAPN1-214ENST00000528165 ODF2Q5BJF6 829 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 CENPPQ6IPU0 288 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 KLHL7Q8IXQ5 586 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 HPS3Q969F9 1004 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 SGSM3Q96HU1 749 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 SCLT1Q96NL6 688 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 RIOK1Q9BRS2 568 aaKnown RBP16.16■□□□□ 0.18
CAPN1-214ENST00000528165 SLC39A2Q9NP94 309 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 TRAPPC3O43617 180 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 FGRP09769 529 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 EZRP15311 586 aaKnown RBP16.16■□□□□ 0.18
CAPN1-214ENST00000528165 SCP2P22307 547 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 PPARDQ03181 441 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 SLC9C1Q4G0N8 1177 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 KIAA0895Q8NCT3 520 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 AK8Q96MA6 479 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 OSBPL7Q9BZF2 842 aa16.16■□□□□ 0.18
CAPN1-214ENST00000528165 PDHBP11177 359 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 HSD17B3P37058 310 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 PRPHP41219 470 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 DYNLL1P63167 89 aaKnown RBP16.15■□□□□ 0.18
CAPN1-214ENST00000528165 EHHADHQ08426 723 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 ANKRD20A8PQ5CZ79 823 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 FAM47AQ5JRC9 791 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 RUFY4Q6ZNE9 571 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 MIEF2Q96C03 454 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 HAUS2Q9NVX0 235 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 FLT1P17948 1338 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 USP17L12C9JPN9 530 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 USP17L21D6R901 530 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 CTNNA1P35221 906 aaKnown RBP16.15■□□□□ 0.18
CAPN1-214ENST00000528165 BIRC3Q13489 604 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 TXNRD1Q16881 649 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 CACNA2D3Q8IZS8 1091 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 LRRC45Q96CN5 670 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 INPP4AQ96PE3 977 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-214ENST00000528165 TANGO6Q9C0B7 1094 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 ISCUQ9H1K1 167 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 BCCIPQ9P287 314 aaKnown RBP eCLIP16.15■□□□□ 0.18
CAPN1-214ENST00000528165 PCDHA6Q9UN73 950 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 PCDHA8Q9Y5H6 950 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 LRP5O75197 1615 aa16.15■□□□□ 0.18
CAPN1-214ENST00000528165 RBAK-RBAKDNI3L0D1 243 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 DNM1LO00429 736 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 NAB2Q15742 525 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 COBLL1Q53SF7 1204 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 OR2W6PQ8NHA6 318 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 EDEM3Q9BZQ6 932 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 SLC12A6Q9UHW9 1150 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 PACSIN2Q9UNF0 486 aaPredicted RBP16.14■□□□□ 0.17
CAPN1-214ENST00000528165 GCFC2P16383 781 aaKnown RBP16.14■□□□□ 0.17
CAPN1-214ENST00000528165 MEI1Q5TIA1 1274 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 HGSNATQ68CP4 663 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 USP38Q8NB14 1042 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 TAF4BQ92750 862 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 SEC16BQ96JE7 1060 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 NLRC4Q9NPP4 1024 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 ASAP1Q9ULH1 1129 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.14■□□□□ 0.17
CAPN1-214ENST00000528165 ABCB11O95342 1321 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 ERCC3P19447 782 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 TMOD1P28289 359 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 CUL1Q13616 776 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 QPCTQ16769 361 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 ARMC9Q7Z3E5 817 aa16.14■□□□□ 0.17
CAPN1-214ENST00000528165 EIF1ADQ8N9N8 165 aaKnown RBP16.14■□□□□ 0.17
CAPN1-214ENST00000528165 MAGEC3Q8TD91 643 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms