RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 COL20A1Q9P218 1284 aa13.34□□□□□ -0.27
CCDC90B-210ENST00000528149 ZBTB5O15062 677 aa13.33□□□□□ -0.28
CCDC90B-210ENST00000528149 PQBP1O60828 265 aaKnown RBP13.33□□□□□ -0.28
CCDC90B-210ENST00000528149 CTDNEP1O95476 244 aa13.33□□□□□ -0.28
CCDC90B-210ENST00000528149 SLC25A27O95847 323 aa13.33□□□□□ -0.28
CCDC90B-210ENST00000528149 ICAM1P05362 532 aa13.33□□□□□ -0.28
CCDC90B-210ENST00000528149 FDX1P10109 184 aa13.33□□□□□ -0.28
CCDC90B-210ENST00000528149 KCTD2Q14681 263 aa13.33□□□□□ -0.28
CCDC90B-210ENST00000528149 PPP2R5BQ15173 497 aa13.33□□□□□ -0.28
CCDC90B-210ENST00000528149 LRRC41Q15345 812 aa13.33□□□□□ -0.28
CCDC90B-210ENST00000528149 NSMFQ6X4W1 530 aa13.33□□□□□ -0.28
CCDC90B-210ENST00000528149 ZSCAN31Q96LW9 406 aaPredicted RBP13.33□□□□□ -0.28
CCDC90B-210ENST00000528149 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.33□□□□□ -0.28
CCDC90B-210ENST00000528149 SLC26A6Q9BXS9 759 aa13.33□□□□□ -0.28
CCDC90B-210ENST00000528149 SEC63Q9UGP8 760 aaKnown RBP13.33□□□□□ -0.28
CCDC90B-210ENST00000528149 JAK2O60674 1132 aa13.32□□□□□ -0.28
CCDC90B-210ENST00000528149 SNAI1O95863 264 aaPredicted RBP13.32□□□□□ -0.28
CCDC90B-210ENST00000528149 IFNAR1P17181 557 aa13.32□□□□□ -0.28
CCDC90B-210ENST00000528149 SMARCA1P28370 1054 aa13.32□□□□□ -0.28
CCDC90B-210ENST00000528149 MCM2P49736 904 aa13.32□□□□□ -0.28
CCDC90B-210ENST00000528149 OAZ1P54368 228 aa13.32□□□□□ -0.28
CCDC90B-210ENST00000528149 FBXO11Q86XK2 927 aa13.32□□□□□ -0.28
CCDC90B-210ENST00000528149 GPKOWQ92917 476 aaPredicted RBP eCLIP13.32□□□□□ -0.28
CCDC90B-210ENST00000528149 KHSRPQ92945 711 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC90B-210ENST00000528149 GBF1Q92538 1859 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 MYH7BA7E2Y1 1941 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 PRRC2BQ5JSZ5 2229 aaKnown RBP13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 PNMA6FA0A0J9YX94 578 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 PTPDC1A2A3K4 754 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 SEPT4O43236 478 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 CALML3P27482 149 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 MRE11P49959 708 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 SSRP1Q08945 709 aaKnown RBP13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 BAATQ14032 418 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 OLFML2BQ68BL8 750 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 CPLX2Q6PUV4 134 aaKnown RBP13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 HEATR3Q7Z4Q2 680 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 HSCBQ8IWL3 235 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 ABRAQ8N0Z2 381 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 ANKRD35Q8N283 1001 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 MICALL1Q8N3F8 863 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 FAM133AQ8N9E0 248 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 NSUN7Q8NE18 718 aaKnown RBP13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 DDX11Q96FC9 970 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 ZFP91Q96JP5 570 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 KATNBL1Q9H079 304 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 TSPYL2Q9H2G4 693 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 ACAD9Q9H845 621 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 TMEM39AQ9NV64 488 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 CYP39A1Q9NYL5 469 aa13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 V9GY48 417 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-210ENST00000528149 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 MYADML2A6NDP7 307 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 K7ELQ4 463 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 ADAMTS3O15072 1205 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 PRPF3O43395 683 aaKnown RBP13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 STRNO43815 780 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 GPR37L1O60883 481 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 CDKL5O76039 1030 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 ZNF865P0CJ78 1059 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 FOSBP53539 338 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 AKAP17AQ02040 695 aaKnown RBP13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 WWC2Q6AWC2 1192 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 EEPD1Q7L9B9 569 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 TRIM22Q8IYM9 498 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 SNX21Q969T3 373 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 AIFM3Q96NN9 605 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 TINF2Q9BSI4 451 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 AMNQ9BXJ7 453 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 RNF26Q9BY78 433 aaPredicted RBP13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 PDGFCQ9NRA1 345 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 PHF24Q9UPV7 400 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 KIAA1217Q5T5P2 1943 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 STK36Q9NRP7 1315 aa13.3□□□□□ -0.28
CCDC90B-210ENST00000528149 TRANK1O15050 2925 aa13.29□□□□□ -0.28
CCDC90B-210ENST00000528149 SCG2P13521 617 aa13.29□□□□□ -0.28
CCDC90B-210ENST00000528149 PKN1Q16512 942 aa13.29□□□□□ -0.28
CCDC90B-210ENST00000528149 AAK1Q2M2I8 961 aa13.29□□□□□ -0.28
CCDC90B-210ENST00000528149 RASIP1Q5U651 963 aa13.29□□□□□ -0.28
CCDC90B-210ENST00000528149 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCDC90B-210ENST00000528149 CHST13Q8NET6 341 aa13.29□□□□□ -0.28
CCDC90B-210ENST00000528149 NKX2-4Q9H2Z4 354 aa13.29□□□□□ -0.28
CCDC90B-210ENST00000528149 ORC3Q9UBD5 711 aaPredicted RBP13.29□□□□□ -0.28
CCDC90B-210ENST00000528149 ZHX1Q9UKY1 873 aaPredicted RBP13.29□□□□□ -0.28
CCDC90B-210ENST00000528149 PCDHA1Q9Y5I3 950 aa13.29□□□□□ -0.28
CCDC90B-210ENST00000528149 ABCB11O95342 1321 aa13.29□□□□□ -0.28
CCDC90B-210ENST00000528149 A0A1W2PQ45 241 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-210ENST00000528149 A0A1W2PQY0 241 aa13.28□□□□□ -0.28
CCDC90B-210ENST00000528149 STXBP3O00186 592 aa13.28□□□□□ -0.28
CCDC90B-210ENST00000528149 HOXA13P31271 388 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-210ENST00000528149 COPB2P35606 906 aa13.28□□□□□ -0.28
CCDC90B-210ENST00000528149 FAAP100Q0VG06 881 aa13.28□□□□□ -0.28
CCDC90B-210ENST00000528149 PFKFB3Q16875 520 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-210ENST00000528149 TKFCQ3LXA3 575 aa13.28□□□□□ -0.28
CCDC90B-210ENST00000528149 TMEM240Q5SV17 173 aa13.28□□□□□ -0.28
CCDC90B-210ENST00000528149 TYW1BQ6NUM6 668 aa13.28□□□□□ -0.28
CCDC90B-210ENST00000528149 C16orf59Q7L2K0 433 aa13.28□□□□□ -0.28
CCDC90B-210ENST00000528149 ARMCX2Q7L311 632 aa13.28□□□□□ -0.28
CCDC90B-210ENST00000528149 FBXO16Q8IX29 292 aaPredicted RBP13.28□□□□□ -0.28
CCDC90B-210ENST00000528149 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms