RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 NT5C3AQ9H0P0 336 aa12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 EHD4Q9H223 541 aa12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 L1RE1Q9UN81 338 aa12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 CCDC66A2RUB6 948 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 RIMBP2O15034 1052 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 EIF3JO75822 258 aaKnown RBP12□□□□□ -0.49
PTPMT1-204ENST00000527079 MCM3P25205 808 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 CYP2C19P33261 490 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 VAV2P52735 878 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 EIF6P56537 245 aaKnown RBP12□□□□□ -0.49
PTPMT1-204ENST00000527079 KIF5AQ12840 1032 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 SPA17Q15506 151 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 HYIQ5T013 277 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 DYMQ7RTS9 669 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 CERS5Q8N5B7 392 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 EDEM3Q9BZQ6 932 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 SIK3Q9Y2K2 1263 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 KDM3AQ9Y4C1 1321 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 RHOXF2BP0C7M4 288 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 NCAPH2Q6IBW4 605 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 TEKT1Q969V4 418 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 RHOXF2Q9BQY4 288 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 PSTPIP2Q9H939 334 aa12□□□□□ -0.49
PTPMT1-204ENST00000527079 F8W031 263 aaPredicted RBP11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 POLR3GO15318 223 aaPredicted RBP11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 MARCH6O60337 910 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 USO1O60763 962 aaKnown RBP11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 PPP1R11O60927 126 aaPredicted RBP11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 LCA5LO95447 670 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 ATP1A1P05023 1023 aaKnown RBP11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 IDEP14735 1019 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 VSNL1P62760 191 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 UBE2SQ16763 222 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 CCDC96Q2M329 555 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 CDC42EP5Q6NZY7 148 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 LRRC55Q6ZSA7 311 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 MYOCDQ8IZQ8 938 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 NOA1Q8NC60 698 aaKnown RBP11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 HAS1Q92839 578 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 SECISBP2LQ93073 1101 aaKnown RBP11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 LACRTQ9GZZ8 138 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 ABCB6Q9NP58 842 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 BMP2KQ9NSY1 1161 aaPredicted RBP11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 PCDHA12Q9UN75 941 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 ANKRD31Q8N7Z5 1873 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 TARSL2A2RTX5 802 aaKnown RBP11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 ENC1O14682 589 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 MEX3CQ5U5Q3 659 aaKnown RBP11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 CLEC10AQ8IUN9 316 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 TXLNBQ8N3L3 684 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 TRIM58Q8NG06 486 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 DNAJC19Q96DA6 116 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 NUDT12Q9BQG2 462 aa11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 TRPC5Q9UL62 973 aaPredicted RBP11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 ATF5Q9Y2D1 282 aaPredicted RBP11.99□□□□□ -0.49
PTPMT1-204ENST00000527079 RCCD1A6NED2 376 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 TFRCP02786 760 aaKnown RBP11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 NPR1P16066 1061 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 USP11P51784 963 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 USP14P54578 494 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 FKBP3Q00688 224 aaKnown RBP11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 MCTP2Q6DN12 878 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 IQCEQ6IPM2 695 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 TTBK2Q6IQ55 1244 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 KCNK18Q7Z418 384 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 MKL1Q969V6 931 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 HDAC6Q9UBN7 1215 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 ARFGEF1Q9Y6D6 1849 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 AFF2P51816 1311 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 USP17L10C9JJH3 530 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 MPHOSPH10O00566 681 aaKnown RBP11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 ALDH1B1P30837 517 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 COASYQ13057 564 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 ZCWPW2Q504Y3 356 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 APOBEC3HQ6NTF7 200 aaKnown RBP11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 MOXD1Q6UVY6 613 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 C2CD5Q86YS7 1000 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 DCAF4Q8WV16 495 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 CEP63Q96MT8 703 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 MRIQ9BWK5 157 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 NUCKS1Q9H1E3 243 aaKnown RBP11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 TMX4Q9H1E5 349 aaPredicted RBP11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 DHX36Q9H2U1 1008 aaKnown RBP11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 ACBD3Q9H3P7 528 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 JRKLQ9Y4A0 524 aa11.98□□□□□ -0.49
PTPMT1-204ENST00000527079 CYP3A7-CYP3A51PA0A087WV96 503 aa11.97□□□□□ -0.49
PTPMT1-204ENST00000527079 NKRFO15226 690 aaKnown RBP eCLIP11.97□□□□□ -0.49
PTPMT1-204ENST00000527079 TACC1O75410 805 aa11.97□□□□□ -0.49
PTPMT1-204ENST00000527079 GNA14O95837 355 aa11.97□□□□□ -0.49
PTPMT1-204ENST00000527079 CYP3A7P24462 503 aa11.97□□□□□ -0.49
PTPMT1-204ENST00000527079 KIF11P52732 1056 aa11.97□□□□□ -0.49
PTPMT1-204ENST00000527079 ECM1Q16610 540 aa11.97□□□□□ -0.49
PTPMT1-204ENST00000527079 MAP9Q49MG5 647 aa11.97□□□□□ -0.49
PTPMT1-204ENST00000527079 FAM26FQ5R3K3 315 aa11.97□□□□□ -0.49
PTPMT1-204ENST00000527079 KCTD1Q719H9 257 aa11.97□□□□□ -0.49
PTPMT1-204ENST00000527079 CCDC65Q8IXS2 484 aa11.97□□□□□ -0.49
PTPMT1-204ENST00000527079 MMS19Q96T76 1030 aa11.97□□□□□ -0.49
PTPMT1-204ENST00000527079 IFIH1Q9BYX4 1025 aaKnown RBP11.97□□□□□ -0.49
PTPMT1-204ENST00000527079 MMRN2Q9H8L6 949 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms