RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 GH1P01241 217 aa12.74□□□□□ -0.37
CTSB-212ENST00000526645 MS4A1P11836 297 aa12.74□□□□□ -0.37
CTSB-212ENST00000526645 CASTP20810 708 aaKnown RBP12.74□□□□□ -0.37
CTSB-212ENST00000526645 CALML3P27482 149 aa12.74□□□□□ -0.37
CTSB-212ENST00000526645 IRS1P35568 1242 aa12.74□□□□□ -0.37
CTSB-212ENST00000526645 CHMP4BP1P59074 171 aa12.74□□□□□ -0.37
CTSB-212ENST00000526645 EPC2Q52LR7 807 aa12.74□□□□□ -0.37
CTSB-212ENST00000526645 FAM117BQ6P1L5 589 aa12.74□□□□□ -0.37
CTSB-212ENST00000526645 BMP8AQ7Z5Y6 402 aa12.74□□□□□ -0.37
CTSB-212ENST00000526645 C7orf31Q8N865 590 aa12.74□□□□□ -0.37
CTSB-212ENST00000526645 COPS5Q92905 334 aa12.74□□□□□ -0.37
CTSB-212ENST00000526645 NAPBQ9H115 298 aa12.74□□□□□ -0.37
CTSB-212ENST00000526645 MICAL3Q7RTP6 2002 aa12.73□□□□□ -0.37
CTSB-212ENST00000526645 RPS6P62753 249 aaKnown RBP12.73□□□□□ -0.37
CTSB-212ENST00000526645 PPARAQ07869 468 aa12.73□□□□□ -0.37
CTSB-212ENST00000526645 GPM6BQ13491 265 aa12.73□□□□□ -0.37
CTSB-212ENST00000526645 SMAD2Q15796 467 aaKnown RBP12.73□□□□□ -0.37
CTSB-212ENST00000526645 DGKDQ16760 1214 aa12.73□□□□□ -0.37
CTSB-212ENST00000526645 TCEAL5Q5H9L2 206 aa12.73□□□□□ -0.37
CTSB-212ENST00000526645 SYDE2Q5VT97 1194 aa12.73□□□□□ -0.37
CTSB-212ENST00000526645 AFG1LQ8WV93 481 aa12.73□□□□□ -0.37
CTSB-212ENST00000526645 GPATCH3Q96I76 525 aa12.73□□□□□ -0.37
CTSB-212ENST00000526645 LRRCC1Q9C099 1032 aa12.73□□□□□ -0.37
CTSB-212ENST00000526645 ECHDC1Q9NTX5 307 aa12.73□□□□□ -0.37
CTSB-212ENST00000526645 NLRC5Q86WI3 1866 aa12.72□□□□□ -0.37
CTSB-212ENST00000526645 WDFY4Q6ZS81 3184 aa12.72□□□□□ -0.37
CTSB-212ENST00000526645 ARIH2O95376 493 aa12.72□□□□□ -0.37
CTSB-212ENST00000526645 NOVP48745 357 aa12.72□□□□□ -0.37
CTSB-212ENST00000526645 ARHGAP1Q07960 439 aa12.72□□□□□ -0.37
CTSB-212ENST00000526645 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
CTSB-212ENST00000526645 TCTN1Q2MV58 587 aa12.72□□□□□ -0.37
CTSB-212ENST00000526645 CCDC62Q6P9F0 684 aa12.72□□□□□ -0.37
CTSB-212ENST00000526645 EP400NLQ6ZTU2 488 aa12.72□□□□□ -0.37
CTSB-212ENST00000526645 FBXO11Q86XK2 927 aa12.72□□□□□ -0.37
CTSB-212ENST00000526645 MYOCDQ8IZQ8 938 aa12.72□□□□□ -0.37
CTSB-212ENST00000526645 PRSS33Q8NF86 280 aa12.72□□□□□ -0.37
CTSB-212ENST00000526645 CLEC4DQ8WXI8 215 aa12.72□□□□□ -0.37
CTSB-212ENST00000526645 KAT2BQ92831 832 aa12.72□□□□□ -0.37
CTSB-212ENST00000526645 YME1L1Q96TA2 773 aa12.72□□□□□ -0.37
CTSB-212ENST00000526645 CHMP4BQ9H444 224 aaKnown RBP12.72□□□□□ -0.37
CTSB-212ENST00000526645 CLDND1Q9NY35 253 aa12.72□□□□□ -0.37
CTSB-212ENST00000526645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.72□□□□□ -0.376e-6■■□□□ 13.9
CTSB-212ENST00000526645 CCER2I3L3R5 266 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 M0R2C6 588 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 F2P00734 622 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 PSEN2P49810 448 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 TRIM71Q2Q1W2 868 aaKnown RBP12.71□□□□□ -0.37
CTSB-212ENST00000526645 ZNF618Q5T7W0 954 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 TRAF7Q6Q0C0 670 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.71□□□□□ -0.37
CTSB-212ENST00000526645 RASGRP2Q7LDG7 609 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 RPAINQ86UA6 219 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 SUGP1Q8IWZ8 645 aaKnown RBP12.71□□□□□ -0.37
CTSB-212ENST00000526645 SIRT2Q8IXJ6 389 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 TMEM192Q8IY95 271 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 RGS22Q8NE09 1264 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 PANK1Q8TE04 598 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 EDAQ92838 391 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 EMID1Q96A84 441 aaPredicted RBP12.71□□□□□ -0.37
CTSB-212ENST00000526645 CHMP4CQ96CF2 233 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 LMAN2LQ9H0V9 348 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 IRF2BPLQ9H1B7 796 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 IL17RBQ9NRM6 502 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 HDAC6Q9UBN7 1215 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 MUTYHQ9UIF7 546 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 DDX19BQ9UMR2 479 aa12.71□□□□□ -0.37
CTSB-212ENST00000526645 SLC16A2P36021 539 aa12.7□□□□□ -0.38
CTSB-212ENST00000526645 SMAD4Q13485 552 aaKnown RBP12.7□□□□□ -0.38
CTSB-212ENST00000526645 MBTPS1Q14703 1052 aa12.7□□□□□ -0.38
CTSB-212ENST00000526645 MFSD10Q14728 455 aa12.7□□□□□ -0.38
CTSB-212ENST00000526645 CTC1Q2NKJ3 1217 aa12.7□□□□□ -0.38
CTSB-212ENST00000526645 DBF4BQ8NFT6 615 aa12.7□□□□□ -0.38
CTSB-212ENST00000526645 RWDD3Q9Y3V2 267 aa12.7□□□□□ -0.38
CTSB-212ENST00000526645 KIAA1217Q5T5P2 1943 aa12.69□□□□□ -0.38
CTSB-212ENST00000526645 HAS3O00219 553 aa12.69□□□□□ -0.38
CTSB-212ENST00000526645 MBTPS2O43462 519 aa12.69□□□□□ -0.38
CTSB-212ENST00000526645 TOP1P11387 765 aaKnown RBP12.69□□□□□ -0.38
CTSB-212ENST00000526645 LTBRP36941 435 aa12.69□□□□□ -0.38
CTSB-212ENST00000526645 KIAA0753Q2KHM9 967 aa12.69□□□□□ -0.38
CTSB-212ENST00000526645 PLEKHG4Q58EX7 1191 aa12.69□□□□□ -0.38
CTSB-212ENST00000526645 TTBK2Q6IQ55 1244 aa12.69□□□□□ -0.38
CTSB-212ENST00000526645 RNF135Q8IUD6 432 aa12.69□□□□□ -0.38
CTSB-212ENST00000526645 PPTC7Q8NI37 304 aa12.69□□□□□ -0.38
CTSB-212ENST00000526645 SEPT8Q92599 483 aa12.69□□□□□ -0.38
CTSB-212ENST00000526645 TOP1MTQ969P6 601 aa12.69□□□□□ -0.38
CTSB-212ENST00000526645 PHOX2BQ99453 314 aa12.69□□□□□ -0.38
CTSB-212ENST00000526645 C11orf84Q9BUA3 381 aaPredicted RBP12.69□□□□□ -0.38
CTSB-212ENST00000526645 ZBTB40Q9NUA8 1239 aa12.69□□□□□ -0.38
CTSB-212ENST00000526645 MTMR7Q9Y216 660 aa12.69□□□□□ -0.38
CTSB-212ENST00000526645 KMT2EQ8IZD2 1858 aa12.68□□□□□ -0.38
CTSB-212ENST00000526645 RSPH10B2B2RC85 870 aa12.68□□□□□ -0.38
CTSB-212ENST00000526645 C5orf67F2Z3F1 127 aa12.68□□□□□ -0.38
CTSB-212ENST00000526645 NMT2O60551 498 aa12.68□□□□□ -0.38
CTSB-212ENST00000526645 GFRA3O60609 400 aa12.68□□□□□ -0.38
CTSB-212ENST00000526645 CAND2O75155 1236 aa12.68□□□□□ -0.38
CTSB-212ENST00000526645 RB1P06400 928 aa12.68□□□□□ -0.38
CTSB-212ENST00000526645 RSPH10BP0C881 870 aa12.68□□□□□ -0.38
CTSB-212ENST00000526645 LAMC2Q13753 1193 aa12.68□□□□□ -0.38
CTSB-212ENST00000526645 STXBP2Q15833 593 aa12.68□□□□□ -0.38
CTSB-212ENST00000526645 LY6KQ17RY6 165 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms