RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 ZNF280AP59817 542 aaPredicted RBP17.81■□□□□ 0.44
USH1C-204ENST00000526313 SPIRE1Q08AE8 756 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 NBPF9Q3BBW0 867 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 USH1GQ495M9 461 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 CENPPQ6IPU0 288 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 FOXR2Q6PJQ5 311 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 GJA10Q969M2 543 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 NAA15Q9BXJ9 866 aaKnown RBP17.81■□□□□ 0.44
USH1C-204ENST00000526313 VPS16Q9H269 839 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 TAOK3Q9H2K8 898 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 RANBP17Q9H2T7 1088 aaKnown RBP17.81■□□□□ 0.44
USH1C-204ENST00000526313 TAB2Q9NYJ8 693 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 ZSCAN12O43309 604 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 MFAP3LO75121 409 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 PSMD2Q13200 908 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 ANKRD40Q6AI12 368 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 KIF18AQ8NI77 898 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 DNAJC19Q96DA6 116 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 TRIM47Q96LD4 638 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 MYOZ2Q9NPC6 264 aa17.81■□□□□ 0.44
USH1C-204ENST00000526313 A0A1W2PQC6 194 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 SPDYE3A6NKU9 549 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 LGALS16A8MUM7 142 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 MARCH6O60337 910 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 FAM83BQ5T0W9 1011 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 TRIM65Q6PJ69 517 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 CHURC1Q8WUH1 139 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 PPP2R2CQ9Y2T4 447 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 NFKBIEO00221 500 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 TRIM14Q14142 442 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 TNIP1Q15025 636 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 CNGA4Q8IV77 575 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 GUF1Q8N442 669 aaKnown RBP17.8■□□□□ 0.44
USH1C-204ENST00000526313 CSGALNACT2Q8N6G5 542 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 JDP2Q8WYK2 163 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 DDX12PQ92771 950 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 FAM20AQ96MK3 541 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 SEMA6BQ9H3T3 888 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 SH2D4AQ9H788 454 aa17.8■□□□□ 0.44
USH1C-204ENST00000526313 SMCHD1A6NHR9 2005 aa17.79■□□□□ 0.44
USH1C-204ENST00000526313 PHF20L1A8MW92 1017 aa17.79■□□□□ 0.44
USH1C-204ENST00000526313 ZBTB7AO95365 584 aa17.79■□□□□ 0.44
USH1C-204ENST00000526313 CASP14P31944 242 aa17.79■□□□□ 0.44
USH1C-204ENST00000526313 FXR1P51114 621 aaKnown RBP eCLIP17.79■□□□□ 0.44
USH1C-204ENST00000526313 ETF1P62495 437 aaKnown RBP17.79■□□□□ 0.44
USH1C-204ENST00000526313 MIGA2Q7L4E1 593 aa17.79■□□□□ 0.44
USH1C-204ENST00000526313 CCDC125Q86Z20 511 aa17.79■□□□□ 0.44
USH1C-204ENST00000526313 MTFR1LQ9H019 292 aa17.79■□□□□ 0.44
USH1C-204ENST00000526313 FAM86B1E9PN63 330 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 ASNSP08243 561 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 FAM86B2P0C5J1 330 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 RPS12P25398 132 aaKnown RBP17.78■□□□□ 0.44
USH1C-204ENST00000526313 FAM160B2Q86V87 743 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 MB21D1Q8N884 522 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 HPS3Q969F9 1004 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 DEFB129Q9H1M3 183 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 SLC39A2Q9NP94 309 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 GOLGA6L9A6NEM1 432 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 TAL1P17542 331 aaPredicted RBP17.78■□□□□ 0.44
USH1C-204ENST00000526313 SYCP1Q15431 976 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 PRR16Q569H4 304 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 DYMQ7RTS9 669 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 FBXO41Q8TF61 875 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 ZNF592Q92610 1267 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 TEPSINQ96N21 525 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 STK24Q9Y6E0 443 aa17.78■□□□□ 0.44
USH1C-204ENST00000526313 SHTN1A0MZ66 631 aa17.77■□□□□ 0.44
USH1C-204ENST00000526313 POLD1P28340 1107 aa17.77■□□□□ 0.44
USH1C-204ENST00000526313 UBXN1Q04323 297 aa17.77■□□□□ 0.44
USH1C-204ENST00000526313 TOGARAM2Q6ZUX3 1019 aa17.77■□□□□ 0.44
USH1C-204ENST00000526313 FAM114A1Q8IWE2 563 aa17.77■□□□□ 0.44
USH1C-204ENST00000526313 L2HGDHQ9H9P8 463 aa17.77■□□□□ 0.44
USH1C-204ENST00000526313 MAGEC2Q9UBF1 373 aaPredicted RBP17.77■□□□□ 0.44
USH1C-204ENST00000526313 FEM1BQ9UK73 627 aa17.77■□□□□ 0.44
USH1C-204ENST00000526313 KIAA1024Q9UPX6 916 aa17.77■□□□□ 0.44
USH1C-204ENST00000526313 LTBP3Q9NS15 1303 aa17.77■□□□□ 0.44
USH1C-204ENST00000526313 RNF225M0QZC1 329 aaPredicted RBP17.77■□□□□ 0.43
USH1C-204ENST00000526313 HOXA13P31271 388 aaPredicted RBP17.77■□□□□ 0.43
USH1C-204ENST00000526313 DNM2P50570 870 aa17.77■□□□□ 0.43
USH1C-204ENST00000526313 TUBGCP2Q9BSJ2 902 aa17.77■□□□□ 0.43
USH1C-204ENST00000526313 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.77■□□□□ 0.43
USH1C-204ENST00000526313 IGLV3-22A0A075B6J6 115 aa17.76■□□□□ 0.43
USH1C-204ENST00000526313 MSH4O15457 936 aa17.76■□□□□ 0.43
USH1C-204ENST00000526313 MED24O75448 989 aa17.76■□□□□ 0.43
USH1C-204ENST00000526313 TPM1P09493 284 aa17.76■□□□□ 0.43
USH1C-204ENST00000526313 PTGER2P43116 358 aa17.76■□□□□ 0.43
USH1C-204ENST00000526313 RASA3Q14644 834 aa17.76■□□□□ 0.43
USH1C-204ENST00000526313 SYT10Q6XYQ8 523 aa17.76■□□□□ 0.43
USH1C-204ENST00000526313 CPLX3Q8WVH0 158 aa17.76■□□□□ 0.43
USH1C-204ENST00000526313 TSC1Q92574 1164 aa17.76■□□□□ 0.43
USH1C-204ENST00000526313 GLIS2Q9BZE0 524 aaPredicted RBP17.76■□□□□ 0.43
USH1C-204ENST00000526313 GINM1Q9NU53 330 aa17.76■□□□□ 0.43
USH1C-204ENST00000526313 PHLPP2Q6ZVD8 1323 aa17.76■□□□□ 0.43
USH1C-204ENST00000526313 E9PMD0 336 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 PLA2G4BP0C869 781 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 RPA1P27694 616 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 STAT3P40763 770 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 LRRC63Q05C16 580 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 HAUS3Q68CZ6 603 aa17.75■□□□□ 0.43
USH1C-204ENST00000526313 RAD9BQ6WBX8 426 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms