RNA–Protein interactions for RNA: ENST00000524463.5

CTSC-203, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 6,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-203ENST00000524463 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.43□□□□□ -0.58
CTSC-203ENST00000524463 IPO11Q9UI26 975 aaKnown RBP11.43□□□□□ -0.58
CTSC-203ENST00000524463 ENC1O14682 589 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 IRX4P78413 519 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 EN1Q05925 392 aaPredicted RBP11.42□□□□□ -0.58
CTSC-203ENST00000524463 EHHADHQ08426 723 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 PDXDC2PQ6P474 469 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 MRPL46Q9H2W6 279 aaKnown RBP11.42□□□□□ -0.58
CTSC-203ENST00000524463 LRRC4Q9HBW1 653 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 ADD3Q9UEY8 706 aaKnown RBP11.42□□□□□ -0.58
CTSC-203ENST00000524463 ZNF215Q9UL58 517 aaPredicted RBP11.42□□□□□ -0.58
CTSC-203ENST00000524463 EXOC3L4Q17RC7 722 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.42□□□□□ -0.58
CTSC-203ENST00000524463 FAM26FQ5R3K3 315 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 KCTD6Q8NC69 237 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 RSRC1Q96IZ7 334 aaKnown RBP11.42□□□□□ -0.58
CTSC-203ENST00000524463 PIDD1Q9HB75 910 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 UBE2TQ9NPD8 197 aaPredicted RBP11.42□□□□□ -0.58
CTSC-203ENST00000524463 ZHX2Q9Y6X8 837 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 KRT1P04264 644 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 CDR2Q01850 454 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 PTK2Q05397 1052 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 OR6B3Q8NGW1 331 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 RNF139Q8WU17 664 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 LARSQ9P2J5 1176 aaKnown RBP11.42□□□□□ -0.58
CTSC-203ENST00000524463 ZNF335Q9H4Z2 1342 aaPredicted RBP11.42□□□□□ -0.58
CTSC-203ENST00000524463 DENND3A2RUS2 1198 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 MFAP3P55082 362 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 CACNB2Q08289 660 aaPredicted RBP11.42□□□□□ -0.58
CTSC-203ENST00000524463 SCRN1Q12765 414 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 SLFNL1Q499Z3 407 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 CC2D2BQ6DHV5 1058 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 THNSL1Q8IYQ7 743 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 TTLL6Q8N841 843 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 ATP6V0A1Q93050 837 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 CNOT6LQ96LI5 555 aaKnown RBP11.42□□□□□ -0.58
CTSC-203ENST00000524463 CPVLQ9H3G5 476 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 DNAJC17Q9NVM6 304 aaKnown RBP11.42□□□□□ -0.58
CTSC-203ENST00000524463 PFDN6O15212 129 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 SMIM24O75264 130 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 NR2F2P24468 414 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 MARCH10Q8NA82 808 aaPredicted RBP11.42□□□□□ -0.58
CTSC-203ENST00000524463 FANCLQ9NW38 375 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 ADCY9O60503 1353 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 ABCC10Q5T3U5 1492 aa11.42□□□□□ -0.58
CTSC-203ENST00000524463 GFPT2O94808 682 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 PDE8BO95263 885 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 FAM83BQ5T0W9 1011 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 DARS2Q6PI48 645 aaKnown RBP11.41□□□□□ -0.58
CTSC-203ENST00000524463 OTUD5Q96G74 571 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 NT5C1BQ96P26 610 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 USP44Q9H0E7 712 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 SLC12A6Q9UHW9 1150 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 ZMYND10O75800 440 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 DCAF4L1Q3SXM0 396 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 RAB3IPQ96QF0 476 aaPredicted RBP11.41□□□□□ -0.58
CTSC-203ENST00000524463 RAB17Q9H0T7 212 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 NUP153P49790 1475 aaKnown RBP11.41□□□□□ -0.58
CTSC-203ENST00000524463 CDC37Q16543 378 aaPredicted RBP11.41□□□□□ -0.58
CTSC-203ENST00000524463 FAM117BQ6P1L5 589 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 WRNIP1Q96S55 665 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 DDAH1O94760 285 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 MX2P20592 715 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 MAPK4P31152 587 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 MECOMQ03112 1051 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 FAM71BQ8TC56 605 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 FGD4Q96M96 766 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 NACC1Q96RE7 527 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 MMTAG2Q9BU76 263 aaKnown RBP11.41□□□□□ -0.58
CTSC-203ENST00000524463 TDRD3Q9H7E2 651 aaKnown RBP11.41□□□□□ -0.58
CTSC-203ENST00000524463 PIM2Q9P1W9 311 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 DPYSL4O14531 572 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 CXCR5P32302 372 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 BASP1P80723 227 aaKnown RBP11.41□□□□□ -0.58
CTSC-203ENST00000524463 CCDC84Q86UT8 332 aaPredicted RBP11.41□□□□□ -0.58
CTSC-203ENST00000524463 MAIP1Q8WWC4 291 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 TSC1Q92574 1164 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 BAG5Q9UL15 447 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 PCDHA4Q9UN74 947 aa11.41□□□□□ -0.58
CTSC-203ENST00000524463 GH2P01242 217 aa11.4□□□□□ -0.58
CTSC-203ENST00000524463 LMNB1P20700 586 aa11.4□□□□□ -0.58
CTSC-203ENST00000524463 SERPINB6P35237 376 aa11.4□□□□□ -0.58
CTSC-203ENST00000524463 ACCSLQ4AC99 568 aa11.4□□□□□ -0.58
CTSC-203ENST00000524463 SLC27A3Q5K4L6 730 aa11.4□□□□□ -0.58
CTSC-203ENST00000524463 SH3RF3Q8TEJ3 882 aaPredicted RBP11.4□□□□□ -0.58
CTSC-203ENST00000524463 PIGOQ8TEQ8 1089 aa11.4□□□□□ -0.58
CTSC-203ENST00000524463 GRK7Q8WTQ7 553 aa11.4□□□□□ -0.58
CTSC-203ENST00000524463 AFG1LQ8WV93 481 aa11.4□□□□□ -0.58
CTSC-203ENST00000524463 P3H4Q92791 437 aa11.4□□□□□ -0.58
CTSC-203ENST00000524463 N4BP2L2Q92802 583 aaPredicted RBP11.4□□□□□ -0.58
CTSC-203ENST00000524463 CABS1Q96KC9 395 aa11.4□□□□□ -0.58
CTSC-203ENST00000524463 XPOTO43592 962 aaKnown RBP11.4□□□□□ -0.58
CTSC-203ENST00000524463 THOC5Q13769 683 aaKnown RBP11.4□□□□□ -0.58
CTSC-203ENST00000524463 ACBD5Q5T8D3 534 aaPredicted RBP11.4□□□□□ -0.58
CTSC-203ENST00000524463 TBK1Q9UHD2 729 aa11.4□□□□□ -0.58
CTSC-203ENST00000524463 SAR1BQ9Y6B6 198 aa11.4□□□□□ -0.58
CTSC-203ENST00000524463 MLH3Q9UHC1 1453 aa11.4□□□□□ -0.58
CTSC-203ENST00000524463 ATP10AO60312 1499 aa11.4□□□□□ -0.58
CTSC-203ENST00000524463 WDR91A4D1P6 747 aa11.4□□□□□ -0.58
CTSC-203ENST00000524463 SNAP23O00161 211 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms