RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	PNMA8A	Q86V59	439 aa	Predicted RBP	12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	CNGA4	Q8IV77	575 aa		12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	MTMR14	Q8NCE2	650 aa		12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	KIF18A	Q8NI77	898 aa		12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	BAG1	Q99933	345 aa	Predicted RBP	12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	C7orf25	Q9BPX7	421 aa		12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	THAP9	Q9H5L6	903 aa		12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	TRMT1	Q9NXH9	659 aa	Known RBP	12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	PCDHA12	Q9UN75	941 aa		12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	PHIP	Q8WWQ0	1821 aa		12.04	□□□□□ -0.48
SPIDR-222	ENST00000524006	SMCHD1	A6NHR9	2005 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	COL11A1	P12107	1806 aa	Predicted RBP	12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	POTEM	A6NI47	508 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	RASSF10	A6NK89	507 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	KIF20A	O95235	890 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	ASNS	P08243	561 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	IDE	P14735	1019 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	RPS12	P25398	132 aa	Known RBP	12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	PRCP	P42785	496 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	COPB1	P53618	953 aa	Known RBP	12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	ARHGAP4	P98171	946 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	SPICE1	Q8N0Z3	855 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	ADSSL1	Q8N142	457 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	RAD54L	Q92698	747 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	CCDC51	Q96ER9	411 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	MTMR9	Q96QG7	549 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	NAA15	Q9BXJ9	866 aa	Known RBP	12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	TRIM9	Q9C026	710 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	PRDM10	Q9NQV6	1147 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	WBP1L	Q9NX94	342 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	TAB2	Q9NYJ8	693 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	MAPK8IP1	Q9UQF2	711 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	ITIH6	Q6UXX5	1313 aa		12.03	□□□□□ -0.48
SPIDR-222	ENST00000524006	USP17L15	C9J2P7	530 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	USP17L13	C9JLJ4	530 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	USP17L11	C9JVI0	530 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	USP17L18	D6R9N7	530 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	USP17L22	D6RA61	530 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	USP17L17	D6RBQ6	530 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	USP17L19	D6RCP7	530 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	USP17L20	D6RJB6	530 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	SLURP2	P0DP57	97 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	PRKCSH	P14314	528 aa	Predicted RBP	12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	MTIF2	P46199	727 aa	Known RBP	12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	CTCF	P49711	727 aa	Predicted RBP	12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	USP17L24	Q0WX57	530 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	MCM6	Q14566	821 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	KRT31	Q15323	416 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	ZYX	Q15942	572 aa	Known RBP	12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	SHROOM1	Q2M3G4	852 aa	Predicted RBP	12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	NAALADL2	Q58DX5	795 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	TCP11X2	Q5H9J9	407 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	FAM83B	Q5T0W9	1011 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	FKBP15	Q5T1M5	1219 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	CCDC174	Q6PII3	467 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	USP17L6P	Q6QN14	398 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	UNC13D	Q70J99	1090 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	CCDC65	Q8IXS2	484 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	CSGALNACT2	Q8N6G5	542 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	GIMAP8	Q8ND71	665 aa	Predicted RBP	12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	P2RX5	Q93086	422 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	KIFC2	Q96AC6	838 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	HOOK2	Q96ED9	719 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	PCMTD1	Q96MG8	357 aa	Predicted RBP	12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	PANX2	Q96RD6	677 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	GML	Q99445	158 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	MYOZ2	Q9NPC6	264 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	KCND1	Q9NSA2	647 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	LIMA1	Q9UHB6	759 aa	Known RBP	12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	PRR12	Q9ULL5	1215 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	MRPL11	Q9Y3B7	192 aa	Known RBP	12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	GJA3	Q9Y6H8	435 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	ABCB11	O95342	1321 aa		12.02	□□□□□ -0.49
SPIDR-222	ENST00000524006	PVALEF	A0A1B0GWK0	134 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	TBX3	O15119	743 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	TBC1D12	O60347	775 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	CCNE1	P24864	410 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	EPS15	P42566	896 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	SNAP25	P60880	206 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	UBXN1	Q04323	297 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	PSMD2	Q13200	908 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	GRB10	Q13322	594 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	DEFB115	Q30KQ5	88 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	TMEM119	Q4V9L6	283 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	PRR16	Q569H4	304 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	NCAPH2	Q6IBW4	605 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	BTNL9	Q6UXG8	535 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	MTERF4	Q7Z6M4	381 aa	Known RBP	12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	PPP1R13B	Q96KQ4	1090 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	MTR	Q99707	1265 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	TMEM39B	Q9GZU3	492 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	VPS16	Q9H269	839 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	VCPKMT	Q9H867	229 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	ADD3	Q9UEY8	706 aa	Known RBP	12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	FEM1B	Q9UK73	627 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	TMX2	Q9Y320	296 aa		12.01	□□□□□ -0.49
SPIDR-222	ENST00000524006	WDR81	Q562E7	1941 aa		12	□□□□□ -0.49
SPIDR-222	ENST00000524006	GCOM1	H8Y6P7	765 aa	Predicted RBP	12	□□□□□ -0.49
SPIDR-222	ENST00000524006	STX10	O60499	249 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms