RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 COQ7Q99807 217 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 NT5C3AQ9H0P0 336 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 FBXO2Q9UK22 296 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-206ENST00000520002 PACSIN2Q9UNF0 486 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-206ENST00000520002 ORC6Q9Y5N6 252 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 DLATP10515 647 aaKnown RBP9.43□□□□□ -0.9
CSMD1-206ENST00000520002 ERFP50548 548 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 GUCY1A3Q02108 690 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 TRIM56Q9BRZ2 755 aaKnown RBP9.43□□□□□ -0.9
CSMD1-206ENST00000520002 SSH2Q76I76 1423 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 KRT75O95678 551 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 C1orf146Q5VVC0 180 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 EDC3Q96F86 508 aaKnown RBP9.43□□□□□ -0.9
CSMD1-206ENST00000520002 SPATA17Q96L03 361 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 YWHAEP62258 255 aaKnown RBP9.43□□□□□ -0.9
CSMD1-206ENST00000520002 PRKG1Q13976 671 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 PLCB4Q15147 1175 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 LLGL1Q15334 1064 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 SLFNL1Q499Z3 407 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 PARP10Q53GL7 1025 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 MYSM1Q5VVJ2 828 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 TMEM154Q6P9G4 183 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 ARL10Q8N8L6 244 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 NRBF2Q96F24 287 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 CEP19Q96LK0 163 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 C1orf112Q9NSG2 853 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 STRIP2Q9ULQ0 834 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 MTMR6Q9Y217 621 aa9.43□□□□□ -0.9
CSMD1-206ENST00000520002 EPN1Q9Y6I3 576 aaPredicted RBP9.43□□□□□ -0.9
CSMD1-206ENST00000520002 MMEP08473 750 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 GLG1Q92896 1179 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 SLC52A2Q9HAB3 445 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 PAX7P23759 505 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.42□□□□□ -0.9
CSMD1-206ENST00000520002 POMGNT1Q8WZA1 660 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 RAPGEF5Q92565 580 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 OLFM3Q96PB7 478 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 MED10Q9BTT4 135 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 ANKFY1Q9P2R3 1169 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 DBNLQ9UJU6 430 aaKnown RBP9.42□□□□□ -0.9
CSMD1-206ENST00000520002 PALD1Q9ULE6 856 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 TRAPPC8Q9Y2L5 1435 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 RPN1P04843 607 aaKnown RBP9.42□□□□□ -0.9
CSMD1-206ENST00000520002 MYOCDQ8IZQ8 938 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 ATP7AQ04656 1500 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 HMGB1P1B2RPK0 211 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-206ENST00000520002 NDUFA8P51970 172 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 OCA2Q04671 838 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 ADALQ6DHV7 355 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 DPP8Q6V1X1 898 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-206ENST00000520002 LMNAP02545 664 aaKnown RBP9.42□□□□□ -0.9
CSMD1-206ENST00000520002 TFAP4Q01664 338 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 BTKQ06187 659 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 RBL2Q08999 1139 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 ARHGEF10O15013 1369 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 ADAMTS12P58397 1594 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 MCF2LO15068 1137 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 SKAP2O75563 359 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-206ENST00000520002 IL13P35225 146 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 PSMD7P51665 324 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 DMP1Q13316 513 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-206ENST00000520002 MFSD14BQ5SR56 506 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 HAUS8Q9BT25 410 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 ARMCX3Q9UH62 379 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-206ENST00000520002 DDX25Q9UHL0 483 aaKnown RBP9.42□□□□□ -0.9
CSMD1-206ENST00000520002 PASKQ96RG2 1323 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 SRGAP2O75044 1071 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 SERPINB3P29508 390 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 HNRNPH1P31943 449 aaKnown RBP9.42□□□□□ -0.9
CSMD1-206ENST00000520002 PLTPP55058 493 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 PTH1RQ03431 593 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 ABCA5Q8WWZ7 1642 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 PALM3A6NDB9 673 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-206ENST00000520002 RAP1GDS1P52306 607 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 DPCR1Q3MIW9 517 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 KIAA0825Q8IV33 1275 aa9.42□□□□□ -0.9
CSMD1-206ENST00000520002 ARIH1Q9Y4X5 557 aaPredicted RBP9.42□□□□□ -0.9
CSMD1-206ENST00000520002 A0A0G2JND7 137 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 ZBED4O75132 1171 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 TCP1P17987 556 aaKnown RBP9.41□□□□□ -0.9
CSMD1-206ENST00000520002 TCP11X2Q5H9J9 407 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 PANK4Q9NVE7 773 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 TTC4O95801 387 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 SLFN14P0C7P3 912 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 TRPC1P48995 793 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 PPP2R5BQ15173 497 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 CHMP2BQ9UQN3 213 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 TRIP13Q15645 432 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-206ENST00000520002 HP1BP3Q5SSJ5 553 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-206ENST00000520002 BICRAQ9NZM4 1560 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 SYNJ2BP-COX16A0A087WUM0 186 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 NEURL1BA8MQ27 555 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 CHL1O00533 1208 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 PDE6CP51160 858 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 CLIC6Q96NY7 704 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 SLC39A2Q9NP94 309 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 COX16Q9P0S2 106 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 WARS2Q9UGM6 360 aaKnown RBP9.41□□□□□ -0.9
CSMD1-206ENST00000520002 CAPN11Q9UMQ6 739 aa9.41□□□□□ -0.9
CSMD1-206ENST00000520002 MFSD4BQ5TF39 518 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms