RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 YBX1P67809 324 aaKnown RBP9.02□□□□□ -0.97
PTPN12-213ENST00000519553 PABPC4Q13310 644 aaKnown RBP eCLIP9.02□□□□□ -0.97
PTPN12-213ENST00000519553 RAB3GAP1Q15042 981 aa9.02□□□□□ -0.97
PTPN12-213ENST00000519553 PLEKHN1Q494U1 663 aaPredicted RBP9.02□□□□□ -0.97
PTPN12-213ENST00000519553 MROH9Q5TGP6 573 aa9.02□□□□□ -0.97
PTPN12-213ENST00000519553 CABP7Q86V35 215 aa9.02□□□□□ -0.97
PTPN12-213ENST00000519553 NSUN3Q9H649 340 aaKnown RBP9.02□□□□□ -0.97
PTPN12-213ENST00000519553 ZNF552Q9H707 407 aaPredicted RBP9.02□□□□□ -0.97
PTPN12-213ENST00000519553 RXFP1Q9HBX9 757 aa9.02□□□□□ -0.97
PTPN12-213ENST00000519553 HCFC2Q9Y5Z7 792 aa9.02□□□□□ -0.97
PTPN12-213ENST00000519553 HRKO00198 91 aa9.01□□□□□ -0.97
PTPN12-213ENST00000519553 GUCY1A3Q02108 690 aa9.01□□□□□ -0.97
PTPN12-213ENST00000519553 DIRC2Q96SL1 478 aa9.01□□□□□ -0.97
PTPN12-213ENST00000519553 ALG1Q9BT22 464 aa9.01□□□□□ -0.97
PTPN12-213ENST00000519553 JAM3Q9BX67 310 aa9.01□□□□□ -0.97
PTPN12-213ENST00000519553 IPPKQ9H8X2 491 aa9.01□□□□□ -0.97
PTPN12-213ENST00000519553 FAM53CQ9NYF3 392 aa9.01□□□□□ -0.97
PTPN12-213ENST00000519553 ZC3H12DA2A288 527 aaKnown RBP9□□□□□ -0.97
PTPN12-213ENST00000519553 LRRC10BA6NIK2 292 aa9□□□□□ -0.97
PTPN12-213ENST00000519553 WNT9AO14904 365 aa9□□□□□ -0.97
PTPN12-213ENST00000519553 DNAJC8O75937 253 aaPredicted RBP9□□□□□ -0.97
PTPN12-213ENST00000519553 HSD3B2P26439 372 aa9□□□□□ -0.97
PTPN12-213ENST00000519553 SLC6A11P48066 632 aa9□□□□□ -0.97
PTPN12-213ENST00000519553 NR1I3Q14994 352 aa9□□□□□ -0.97
PTPN12-213ENST00000519553 MLANAQ16655 118 aa9□□□□□ -0.97
PTPN12-213ENST00000519553 ZNF605Q86T29 641 aa9□□□□□ -0.97
PTPN12-213ENST00000519553 PCDH19Q8TAB3 1148 aa9□□□□□ -0.97
PTPN12-213ENST00000519553 EPB41L1Q9H4G0 881 aa9□□□□□ -0.97
PTPN12-213ENST00000519553 KCNK12Q9HB15 430 aa9□□□□□ -0.97
PTPN12-213ENST00000519553 SIT1Q9Y3P8 196 aa9□□□□□ -0.97
PTPN12-213ENST00000519553 TCRBV16S1A1N1A0A5B0 115 aa8.99□□□□□ -0.97
PTPN12-213ENST00000519553 NAT1P18440 290 aa8.99□□□□□ -0.97
PTPN12-213ENST00000519553 SDSP20132 328 aa8.99□□□□□ -0.97
PTPN12-213ENST00000519553 MAPKAPK2P49137 400 aa8.99□□□□□ -0.97
PTPN12-213ENST00000519553 PAK1Q13153 545 aa8.99□□□□□ -0.97
PTPN12-213ENST00000519553 C21orf62-AS1Q17RA5 79 aa8.99□□□□□ -0.97
PTPN12-213ENST00000519553 DCP2Q8IU60 420 aaKnown RBP8.99□□□□□ -0.97
PTPN12-213ENST00000519553 EPB41L4BQ9H329 900 aa8.99□□□□□ -0.97
PTPN12-213ENST00000519553 COA3Q9Y2R0 106 aaPredicted RBP8.99□□□□□ -0.97
PTPN12-213ENST00000519553 MYOCOSA0A1B0GUC4 107 aa8.98□□□□□ -0.97
PTPN12-213ENST00000519553 F8W031 263 aaPredicted RBP8.98□□□□□ -0.97
PTPN12-213ENST00000519553 VIPR1P32241 457 aa8.98□□□□□ -0.97
PTPN12-213ENST00000519553 DALRD3Q5D0E6 543 aaKnown RBP8.98□□□□□ -0.97
PTPN12-213ENST00000519553 EMC4Q5J8M3 183 aa8.98□□□□□ -0.97
PTPN12-213ENST00000519553 HABP4Q5JVS0 413 aaKnown RBP8.98□□□□□ -0.97
PTPN12-213ENST00000519553 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.98□□□□□ -0.97
PTPN12-213ENST00000519553 MAGEB10Q96LZ2 347 aaPredicted RBP8.98□□□□□ -0.97
PTPN12-213ENST00000519553 DCP1AQ9NPI6 582 aaPredicted RBP8.98□□□□□ -0.97
PTPN12-213ENST00000519553 PLA2G2DQ9UNK4 145 aa8.98□□□□□ -0.97
PTPN12-213ENST00000519553 FAM47E-STBD1D6RA91 191 aa8.97□□□□□ -0.97
PTPN12-213ENST00000519553 SGSM2O43147 1006 aa8.97□□□□□ -0.97
PTPN12-213ENST00000519553 EGFLAMQ63HQ2 1017 aa8.97□□□□□ -0.97
PTPN12-213ENST00000519553 ABHD17CQ6PCB6 329 aa8.97□□□□□ -0.97
PTPN12-213ENST00000519553 NINJ1Q92982 152 aa8.97□□□□□ -0.97
PTPN12-213ENST00000519553 TSPAN17Q96FV3 270 aa8.97□□□□□ -0.97
PTPN12-213ENST00000519553 PEX11GQ96HA9 241 aa8.97□□□□□ -0.97
PTPN12-213ENST00000519553 KCNJ15Q99712 375 aa8.97□□□□□ -0.97
PTPN12-213ENST00000519553 MCOLN1Q9GZU1 580 aa8.97□□□□□ -0.97
PTPN12-213ENST00000519553 ABLIM1O14639 778 aa8.96□□□□□ -0.98
PTPN12-213ENST00000519553 PEX10O60683 326 aa8.96□□□□□ -0.98
PTPN12-213ENST00000519553 DGKIO75912 1065 aa8.96□□□□□ -0.98
PTPN12-213ENST00000519553 CKMP06732 381 aa8.96□□□□□ -0.98
PTPN12-213ENST00000519553 KCNA6P17658 529 aa8.96□□□□□ -0.98
PTPN12-213ENST00000519553 PRR5P85299 388 aa8.96□□□□□ -0.98
PTPN12-213ENST00000519553 TMEM62Q0P6H9 643 aa8.96□□□□□ -0.98
PTPN12-213ENST00000519553 ZC3H14Q6PJT7 736 aaKnown RBP8.96□□□□□ -0.98
PTPN12-213ENST00000519553 OTOP3Q7RTS5 596 aa8.96□□□□□ -0.98
PTPN12-213ENST00000519553 TMC6Q7Z403 805 aa8.96□□□□□ -0.98
PTPN12-213ENST00000519553 SEC14L1Q92503 715 aa8.96□□□□□ -0.98
PTPN12-213ENST00000519553 NUDT5Q9UKK9 219 aa8.96□□□□□ -0.98
PTPN12-213ENST00000519553 PLAAQ9Y263 795 aa8.96□□□□□ -0.98
PTPN12-213ENST00000519553 CADPSQ9ULU8 1353 aa8.96□□□□□ -0.98
PTPN12-213ENST00000519553 SRGAP2CP0DJJ0 459 aa8.95□□□□□ -0.98
PTPN12-213ENST00000519553 FBLN1P23142 703 aa8.95□□□□□ -0.98
PTPN12-213ENST00000519553 MESP2Q0VG99 397 aa8.95□□□□□ -0.98
PTPN12-213ENST00000519553 ZNF460Q14592 562 aa8.95□□□□□ -0.98
PTPN12-213ENST00000519553 ZC3H7AQ8IWR0 971 aaKnown RBP8.95□□□□□ -0.98
PTPN12-213ENST00000519553 PIP4K2CQ8TBX8 421 aa8.95□□□□□ -0.98
PTPN12-213ENST00000519553 ZNF652Q9Y2D9 606 aa8.95□□□□□ -0.98
PTPN12-213ENST00000519553 TNPO3Q9Y5L0 923 aaKnown RBP8.95□□□□□ -0.98
PTPN12-213ENST00000519553 FAM83GA6ND36 823 aa8.94□□□□□ -0.98
PTPN12-213ENST00000519553 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.94□□□□□ -0.98
PTPN12-213ENST00000519553 NKRFO15226 690 aaKnown RBP eCLIP8.94□□□□□ -0.98
PTPN12-213ENST00000519553 TADA3O75528 432 aa8.94□□□□□ -0.98
PTPN12-213ENST00000519553 SRSF3P84103 164 aaKnown RBP8.94□□□□□ -0.98
PTPN12-213ENST00000519553 STEAP3Q658P3 488 aa8.94□□□□□ -0.98
PTPN12-213ENST00000519553 NIM1KQ8IY84 436 aa8.94□□□□□ -0.98
PTPN12-213ENST00000519553 FBXW5Q969U6 566 aa8.94□□□□□ -0.98
PTPN12-213ENST00000519553 AP5M1Q9H0R1 490 aa8.94□□□□□ -0.98
PTPN12-213ENST00000519553 SLC6A20Q9NP91 592 aa8.94□□□□□ -0.98
PTPN12-213ENST00000519553 INTS7Q9NVH2 962 aaKnown RBP8.94□□□□□ -0.98
PTPN12-213ENST00000519553 MAGEC2Q9UBF1 373 aaPredicted RBP8.94□□□□□ -0.98
PTPN12-213ENST00000519553 MBD1Q9UIS9 605 aaPredicted RBP8.94□□□□□ -0.98
PTPN12-213ENST00000519553 DBR1Q9UK59 544 aaKnown RBP8.94□□□□□ -0.98
PTPN12-213ENST00000519553 PALD1Q9ULE6 856 aa8.94□□□□□ -0.98
PTPN12-213ENST00000519553 CBLCQ9ULV8 474 aa8.94□□□□□ -0.98
PTPN12-213ENST00000519553 RNF114Q9Y508 228 aa8.94□□□□□ -0.98
PTPN12-213ENST00000519553 LOC105371045A0A1W2PR82 267 aa8.93□□□□□ -0.98
PTPN12-213ENST00000519553 TCRBV5S4A2TA0A5A2 114 aa8.93□□□□□ -0.98
PTPN12-213ENST00000519553 IRS4O14654 1257 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms