RNA–Protein interactions for RNA: ENST00000518928.1

TSNARE1-203, Transcript of t-SNARE domain containing 1, humanhuman

TSL 3

Gene TSNARE1, Length 940 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-203ENST00000518928 TLR3O15455 904 aaKnown RBP16.4■□□□□ 0.22
TSNARE1-203ENST00000518928 EPB41L2O43491 1005 aaKnown RBP16.4■□□□□ 0.22
TSNARE1-203ENST00000518928 NR3C2P08235 984 aa16.4■□□□□ 0.22
TSNARE1-203ENST00000518928 CHMP4BP1P59074 171 aa16.4■□□□□ 0.22
TSNARE1-203ENST00000518928 SMAD3P84022 425 aaKnown RBP16.4■□□□□ 0.22
TSNARE1-203ENST00000518928 EXOSC10Q01780 885 aaKnown RBP16.4■□□□□ 0.22
TSNARE1-203ENST00000518928 GHRHRQ02643 423 aa16.4■□□□□ 0.22
TSNARE1-203ENST00000518928 SART3Q15020 963 aaKnown RBP16.4■□□□□ 0.22
TSNARE1-203ENST00000518928 ZNF697Q5TEC3 545 aa16.4■□□□□ 0.22
TSNARE1-203ENST00000518928 ARHGEF16Q5VV41 709 aa16.4■□□□□ 0.22
TSNARE1-203ENST00000518928 ZNF654Q8IZM8 581 aa16.4■□□□□ 0.22
TSNARE1-203ENST00000518928 MYLIPQ8WY64 445 aa16.4■□□□□ 0.22
TSNARE1-203ENST00000518928 TCEANC2Q96MN5 208 aa16.4■□□□□ 0.22
TSNARE1-203ENST00000518928 PNMA2Q9UL42 364 aa16.4■□□□□ 0.22
TSNARE1-203ENST00000518928 CHD9Q3L8U1 2897 aa16.4■□□□□ 0.22
TSNARE1-203ENST00000518928 hCG_1642624A0A1W2PR95 340 aa16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 ZEB2O60315 1214 aa16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 SEC24BO95487 1268 aa16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 MMP3P08254 477 aa16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 MYCLP12524 364 aaPredicted RBP16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 CPA1P15085 419 aa16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 CPT1AP50416 773 aa16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 SP2Q02086 613 aa16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 PPIGQ13427 754 aaKnown RBP eCLIP16.39■□□□□ 0.215e-7■■■■□ 19.7
TSNARE1-203ENST00000518928 TTLL4Q14679 1199 aa16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 FAM47CQ5HY64 1035 aa16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 MCF2L2Q86YR7 1114 aa16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 SLC17A8Q8NDX2 589 aa16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 PDCD2LQ9BRP1 358 aa16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 MTG1Q9BT17 334 aaPredicted RBP16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 MTA3Q9BTC8 594 aa16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 POLR3EQ9NVU0 708 aa16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 DDX41Q9UJV9 622 aaKnown RBP16.39■□□□□ 0.21
TSNARE1-203ENST00000518928 DNAJB2P25686 324 aa16.38■□□□□ 0.21
TSNARE1-203ENST00000518928 HIC1Q14526 733 aa16.38■□□□□ 0.21
TSNARE1-203ENST00000518928 KRT32Q14532 448 aa16.38■□□□□ 0.21
TSNARE1-203ENST00000518928 GRIN2CQ14957 1233 aa16.38■□□□□ 0.21
TSNARE1-203ENST00000518928 PGM5Q15124 567 aa16.38■□□□□ 0.21
TSNARE1-203ENST00000518928 STXBP2Q15833 593 aa16.38■□□□□ 0.21
TSNARE1-203ENST00000518928 DHX32Q7L7V1 743 aaKnown RBP16.38■□□□□ 0.21
TSNARE1-203ENST00000518928 OTOP2Q7RTS6 562 aa16.38■□□□□ 0.21
TSNARE1-203ENST00000518928 FCHSD1Q86WN1 690 aa16.38■□□□□ 0.21
TSNARE1-203ENST00000518928 TMEM199Q8N511 208 aa16.38■□□□□ 0.21
TSNARE1-203ENST00000518928 TMEM87BQ96K49 555 aa16.38■□□□□ 0.21
TSNARE1-203ENST00000518928 PBX4Q9BYU1 374 aa16.38■□□□□ 0.21
TSNARE1-203ENST00000518928 IL23AQ9NPF7 189 aa16.38■□□□□ 0.21
TSNARE1-203ENST00000518928 NKRFO15226 690 aaKnown RBP eCLIP16.37■□□□□ 0.211e-6■□□□□ 9.6
TSNARE1-203ENST00000518928 ZNF286BP0CG31 522 aa16.37■□□□□ 0.21
TSNARE1-203ENST00000518928 LIFRP42702 1097 aa16.37■□□□□ 0.21
TSNARE1-203ENST00000518928 SRBD1Q8N5C6 995 aaKnown RBP16.37■□□□□ 0.21
TSNARE1-203ENST00000518928 JAKMIP1Q96N16 626 aaKnown RBP16.37■□□□□ 0.21
TSNARE1-203ENST00000518928 IWS1Q96ST2 819 aa16.37■□□□□ 0.21
TSNARE1-203ENST00000518928 VCANP13611 3396 aa16.37■□□□□ 0.21
TSNARE1-203ENST00000518928 GBF1Q92538 1859 aa16.37■□□□□ 0.21
TSNARE1-203ENST00000518928 CHD7Q9P2D1 2997 aa16.37■□□□□ 0.21
TSNARE1-203ENST00000518928 PNMA6FA0A0J9YX94 578 aa16.36■□□□□ 0.21
TSNARE1-203ENST00000518928 GH1P01241 217 aa16.36■□□□□ 0.21
TSNARE1-203ENST00000518928 MYOGP15173 224 aa16.36■□□□□ 0.21
TSNARE1-203ENST00000518928 MRPS9P82933 396 aaKnown RBP16.36■□□□□ 0.21
TSNARE1-203ENST00000518928 SEMA3FQ13275 785 aa16.36■□□□□ 0.21
TSNARE1-203ENST00000518928 GDF6Q6KF10 455 aaPredicted RBP16.36■□□□□ 0.21
TSNARE1-203ENST00000518928 USP17L6PQ6QN14 398 aa16.36■□□□□ 0.21
TSNARE1-203ENST00000518928 DEFB128Q7Z7B8 93 aa16.36■□□□□ 0.21
TSNARE1-203ENST00000518928 CATIPQ7Z7H3 387 aa16.36■□□□□ 0.21
TSNARE1-203ENST00000518928 DHX38Q92620 1227 aaKnown RBP16.36■□□□□ 0.21
TSNARE1-203ENST00000518928 WNT8BQ93098 351 aa16.36■□□□□ 0.21
TSNARE1-203ENST00000518928 YBX2Q9Y2T7 364 aaKnown RBP16.36■□□□□ 0.21
TSNARE1-203ENST00000518928 TET1Q8NFU7 2136 aa16.36■□□□□ 0.21
TSNARE1-203ENST00000518928 DOCK5Q9H7D0 1870 aa16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 EIF3JO75822 258 aaKnown RBP16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 UBA1P22314 1058 aaKnown RBP16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 RABGGTBP53611 331 aa16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 ZNF200P98182 395 aaPredicted RBP16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 GPNMBQ14956 572 aa16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 TCTN1Q2MV58 587 aa16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 HSDL1Q3SXM5 330 aa16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 C8orf34Q49A92 452 aa16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 NFXL1Q6ZNB6 911 aa16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 VSIG10LQ86VR7 867 aa16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 SGMS1Q86VZ5 419 aa16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 TMTC2Q8N394 836 aa16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 CCDC82Q8N4S0 544 aa16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 HERVK_113Q902F9 699 aa16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 MRVI1Q9Y6F6 885 aa16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 MYH7BA7E2Y1 1941 aa16.35■□□□□ 0.21
TSNARE1-203ENST00000518928 TANC1Q9C0D5 1861 aa16.34■□□□□ 0.21
TSNARE1-203ENST00000518928 CCDC69A6NI79 296 aa16.34■□□□□ 0.21
TSNARE1-203ENST00000518928 GCOM1H8Y6P7 765 aaPredicted RBP16.34■□□□□ 0.21
TSNARE1-203ENST00000518928 DDAH1O94760 285 aa16.34■□□□□ 0.21
TSNARE1-203ENST00000518928 HMGB1P09429 215 aaKnown RBP16.34■□□□□ 0.21
TSNARE1-203ENST00000518928 POLR2MP0CAP2 368 aa16.34■□□□□ 0.21
TSNARE1-203ENST00000518928 PSRC1Q6PGN9 363 aaPredicted RBP16.34■□□□□ 0.21
TSNARE1-203ENST00000518928 USP38Q8NB14 1042 aa16.34■□□□□ 0.21
TSNARE1-203ENST00000518928 MPHOSPH6Q99547 160 aaKnown RBP16.34■□□□□ 0.21
TSNARE1-203ENST00000518928 ALG1Q9BT22 464 aa16.34■□□□□ 0.21
TSNARE1-203ENST00000518928 SPZ1Q9BXG8 430 aa16.34■□□□□ 0.21
TSNARE1-203ENST00000518928 BRPF3Q9ULD4 1205 aa16.34■□□□□ 0.21
TSNARE1-203ENST00000518928 MEIS2O14770 477 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms