RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 TSR1Q2NL82 804 aaKnown RBP12.04□□□□□ -0.48
SPIDR-204ENST00000517824 MOXD1Q6UVY6 613 aa12.04□□□□□ -0.48
SPIDR-204ENST00000517824 PNMA8AQ86V59 439 aaPredicted RBP12.04□□□□□ -0.48
SPIDR-204ENST00000517824 CNGA4Q8IV77 575 aa12.04□□□□□ -0.48
SPIDR-204ENST00000517824 MTMR14Q8NCE2 650 aa12.04□□□□□ -0.48
SPIDR-204ENST00000517824 KIF18AQ8NI77 898 aa12.04□□□□□ -0.48
SPIDR-204ENST00000517824 BAG1Q99933 345 aaPredicted RBP12.04□□□□□ -0.48
SPIDR-204ENST00000517824 C7orf25Q9BPX7 421 aa12.04□□□□□ -0.48
SPIDR-204ENST00000517824 THAP9Q9H5L6 903 aa12.04□□□□□ -0.48
SPIDR-204ENST00000517824 TRMT1Q9NXH9 659 aaKnown RBP12.04□□□□□ -0.48
SPIDR-204ENST00000517824 PCDHA12Q9UN75 941 aa12.04□□□□□ -0.48
SPIDR-204ENST00000517824 PHIPQ8WWQ0 1821 aa12.04□□□□□ -0.48
SPIDR-204ENST00000517824 SMCHD1A6NHR9 2005 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 COL11A1P12107 1806 aaPredicted RBP12.03□□□□□ -0.48
SPIDR-204ENST00000517824 POTEMA6NI47 508 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 RASSF10A6NK89 507 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 KIF20AO95235 890 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 ASNSP08243 561 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 IDEP14735 1019 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 RPS12P25398 132 aaKnown RBP12.03□□□□□ -0.48
SPIDR-204ENST00000517824 PRCPP42785 496 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 COPB1P53618 953 aaKnown RBP12.03□□□□□ -0.48
SPIDR-204ENST00000517824 ARHGAP4P98171 946 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 SPICE1Q8N0Z3 855 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 ADSSL1Q8N142 457 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 RAD54LQ92698 747 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 CCDC51Q96ER9 411 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 MTMR9Q96QG7 549 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 NAA15Q9BXJ9 866 aaKnown RBP12.03□□□□□ -0.48
SPIDR-204ENST00000517824 TRIM9Q9C026 710 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 PRDM10Q9NQV6 1147 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 WBP1LQ9NX94 342 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 TAB2Q9NYJ8 693 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 MAPK8IP1Q9UQF2 711 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 ITIH6Q6UXX5 1313 aa12.03□□□□□ -0.48
SPIDR-204ENST00000517824 USP17L15C9J2P7 530 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 USP17L13C9JLJ4 530 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 USP17L11C9JVI0 530 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 USP17L18D6R9N7 530 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 USP17L22D6RA61 530 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 USP17L17D6RBQ6 530 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 USP17L19D6RCP7 530 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 USP17L20D6RJB6 530 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 SLURP2P0DP57 97 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 PRKCSHP14314 528 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-204ENST00000517824 MTIF2P46199 727 aaKnown RBP12.02□□□□□ -0.49
SPIDR-204ENST00000517824 CTCFP49711 727 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-204ENST00000517824 USP17L24Q0WX57 530 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 MCM6Q14566 821 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 KRT31Q15323 416 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 ZYXQ15942 572 aaKnown RBP12.02□□□□□ -0.49
SPIDR-204ENST00000517824 SHROOM1Q2M3G4 852 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-204ENST00000517824 NAALADL2Q58DX5 795 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 TCP11X2Q5H9J9 407 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 FAM83BQ5T0W9 1011 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 FKBP15Q5T1M5 1219 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 CCDC174Q6PII3 467 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 USP17L6PQ6QN14 398 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 UNC13DQ70J99 1090 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 CCDC65Q8IXS2 484 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 CSGALNACT2Q8N6G5 542 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 GIMAP8Q8ND71 665 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-204ENST00000517824 P2RX5Q93086 422 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 KIFC2Q96AC6 838 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 HOOK2Q96ED9 719 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 PCMTD1Q96MG8 357 aaPredicted RBP12.02□□□□□ -0.49
SPIDR-204ENST00000517824 PANX2Q96RD6 677 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 GMLQ99445 158 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 MYOZ2Q9NPC6 264 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 KCND1Q9NSA2 647 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 LIMA1Q9UHB6 759 aaKnown RBP12.02□□□□□ -0.49
SPIDR-204ENST00000517824 PRR12Q9ULL5 1215 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 MRPL11Q9Y3B7 192 aaKnown RBP12.02□□□□□ -0.49
SPIDR-204ENST00000517824 GJA3Q9Y6H8 435 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 ABCB11O95342 1321 aa12.02□□□□□ -0.49
SPIDR-204ENST00000517824 PVALEFA0A1B0GWK0 134 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 TBX3O15119 743 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 TBC1D12O60347 775 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 CCNE1P24864 410 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 EPS15P42566 896 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 SNAP25P60880 206 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 UBXN1Q04323 297 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 PSMD2Q13200 908 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 GRB10Q13322 594 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 DEFB115Q30KQ5 88 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 TMEM119Q4V9L6 283 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 PRR16Q569H4 304 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 NCAPH2Q6IBW4 605 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 BTNL9Q6UXG8 535 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 MTERF4Q7Z6M4 381 aaKnown RBP12.01□□□□□ -0.49
SPIDR-204ENST00000517824 PPP1R13BQ96KQ4 1090 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 MTRQ99707 1265 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 TMEM39BQ9GZU3 492 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 VPS16Q9H269 839 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 VCPKMTQ9H867 229 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 ADD3Q9UEY8 706 aaKnown RBP12.01□□□□□ -0.49
SPIDR-204ENST00000517824 FEM1BQ9UK73 627 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 TMX2Q9Y320 296 aa12.01□□□□□ -0.49
SPIDR-204ENST00000517824 WDR81Q562E7 1941 aa12□□□□□ -0.49
SPIDR-204ENST00000517824 GCOM1H8Y6P7 765 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms