RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 NLRC5Q86WI3 1866 aa13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 GRXCR2A6NFK2 248 aa13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 DCXO43602 365 aa13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 ARIH2O95376 493 aa13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 IL9P15248 144 aa13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 MRE11P49959 708 aa13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 DGKDQ16760 1214 aa13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 TIGD5Q53EQ6 642 aa13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 CCDC62Q6P9F0 684 aa13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 C7orf31Q8N865 590 aa13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 RGS22Q8NE09 1264 aa13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 AFG1LQ8WV93 481 aa13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 DHX38Q92620 1227 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 MRPL38Q96DV4 380 aaKnown RBP13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 SAMD11Q96NU1 681 aa13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 GPCPD1Q9NPB8 672 aa13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 COL4A6Q14031 1691 aa13.47□□□□□ -0.25
TRAPPC9-203ENST00000517667 RALGAPA2Q2PPJ7 1873 aa13.46□□□□□ -0.25
TRAPPC9-203ENST00000517667 FGRP09769 529 aa13.46□□□□□ -0.25
TRAPPC9-203ENST00000517667 PDHBP11177 359 aa13.46□□□□□ -0.25
TRAPPC9-203ENST00000517667 ARHGAP1Q07960 439 aa13.46□□□□□ -0.25
TRAPPC9-203ENST00000517667 PTK7Q13308 1070 aa13.46□□□□□ -0.25
TRAPPC9-203ENST00000517667 NEK9Q8TD19 979 aa13.46□□□□□ -0.25
TRAPPC9-203ENST00000517667 KAT2BQ92831 832 aa13.46□□□□□ -0.25
TRAPPC9-203ENST00000517667 EMID1Q96A84 441 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC9-203ENST00000517667 TMEM47Q9BQJ4 181 aa13.46□□□□□ -0.25
TRAPPC9-203ENST00000517667 DCTPP1Q9H773 170 aa13.46□□□□□ -0.25
TRAPPC9-203ENST00000517667 TOMM22Q9NS69 142 aa13.46□□□□□ -0.25
TRAPPC9-203ENST00000517667 TCP11L1Q9NUJ3 509 aa13.46□□□□□ -0.25
TRAPPC9-203ENST00000517667 PRKAG3Q9UGI9 489 aa13.46□□□□□ -0.25
TRAPPC9-203ENST00000517667 LGR5O75473 907 aa13.45□□□□□ -0.26
TRAPPC9-203ENST00000517667 AMHP03971 560 aa13.45□□□□□ -0.26
TRAPPC9-203ENST00000517667 NHLH1Q02575 133 aa13.45□□□□□ -0.26
TRAPPC9-203ENST00000517667 ZNF543Q08ER8 600 aa13.45□□□□□ -0.26
TRAPPC9-203ENST00000517667 LY6KQ17RY6 165 aa13.45□□□□□ -0.26
TRAPPC9-203ENST00000517667 FAM117BQ6P1L5 589 aa13.45□□□□□ -0.26
TRAPPC9-203ENST00000517667 NSUN6Q8TEA1 469 aaKnown RBP13.45□□□□□ -0.26
TRAPPC9-203ENST00000517667 C17orf80Q9BSJ5 609 aa13.45□□□□□ -0.26
TRAPPC9-203ENST00000517667 INCENPQ9NQS7 918 aa13.45□□□□□ -0.26
TRAPPC9-203ENST00000517667 HDAC6Q9UBN7 1215 aa13.45□□□□□ -0.26
TRAPPC9-203ENST00000517667 WDFY4Q6ZS81 3184 aa13.45□□□□□ -0.26
TRAPPC9-203ENST00000517667 FOXP2O15409 715 aa13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 F2P00734 622 aa13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 PSEN2P49810 448 aa13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 HTRA4P83105 476 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 STXBP2Q15833 593 aa13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 GPATCH4Q5T3I0 446 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 ZNF618Q5T7W0 954 aa13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 SEPT14Q6ZU15 432 aa13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 CHST3Q7LGC8 479 aa13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 PI4K2BQ8TCG2 481 aa13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 SP7Q8TDD2 431 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 PABPC5Q96DU9 382 aaKnown RBP13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 TTC14Q96N46 770 aa13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 IWS1Q96ST2 819 aa13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 MYH7BA7E2Y1 1941 aa13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 MYH6P13533 1939 aa13.44□□□□□ -0.26
TRAPPC9-203ENST00000517667 ABCB11O95342 1321 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 POTEB3A0JP26 581 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 SNHG28P0DPA3 235 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 LAMC2Q13753 1193 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 MFSD10Q14728 455 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 ALX1Q15699 326 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 KIAA0753Q2KHM9 967 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 TCTN1Q2MV58 587 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 USH1GQ495M9 461 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 EPC2Q52LR7 807 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 RRP12Q5JTH9 1297 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 POTEBQ6S5H4 581 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 MCF2L2Q86YR7 1114 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 MYOCDQ8IZQ8 938 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 BANK1Q8NDB2 785 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 PPTC7Q8NI37 304 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 ALG1Q9BT22 464 aa13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 UPF3BQ9BZI7 483 aaKnown RBP13.43□□□□□ -0.26
TRAPPC9-203ENST00000517667 H3BNC9 293 aa13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 H3BQ06 376 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 HAS3O00219 553 aa13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 NCK2O43639 380 aa13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 PCP11498 1178 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 ZP2Q05996 745 aa13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 MBTPS1Q14703 1052 aa13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 COL19A1Q14993 1142 aa13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 TRIM71Q2Q1W2 868 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 TRAF7Q6Q0C0 670 aa13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 ADHFE1Q8IWW8 467 aa13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 DHX37Q8IY37 1157 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 FBXL18Q96ME1 805 aa13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 RMDN3Q96TC7 470 aa13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 NSUN3Q9H649 340 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 DDX41Q9UJV9 622 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 MRVI1Q9Y6F6 885 aa13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 ZNF318Q5VUA4 2279 aa13.42□□□□□ -0.26
TRAPPC9-203ENST00000517667 ZMYM6O95789 1325 aa13.41□□□□□ -0.26
TRAPPC9-203ENST00000517667 C19orf67A6NJJ6 358 aa13.41□□□□□ -0.26
TRAPPC9-203ENST00000517667 RSPH10B2B2RC85 870 aa13.41□□□□□ -0.26
TRAPPC9-203ENST00000517667 EIF3JO75822 258 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-203ENST00000517667 RSPH10BP0C881 870 aa13.41□□□□□ -0.26
TRAPPC9-203ENST00000517667 ZNF286BP0CG31 522 aa13.41□□□□□ -0.26
TRAPPC9-203ENST00000517667 MKRN4PQ13434 485 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms