RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 EXOC3L4Q17RC7 722 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 ANGPTL8Q6UXH0 198 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 PRPF38AQ8NAV1 312 aaKnown RBP11.98□□□□□ -0.49
TRIM41-209ENST00000515834 BCAP29Q9UHQ4 241 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 LRRN2O75325 713 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 PCCAP05165 728 aaPredicted RBP11.98□□□□□ -0.49
TRIM41-209ENST00000515834 ARL4AP40617 200 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 NOP14P78316 857 aaKnown RBP11.98□□□□□ -0.49
TRIM41-209ENST00000515834 FAM26FQ5R3K3 315 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 CLIC6Q96NY7 704 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 ACCSQ96QU6 501 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 HINFPQ9BQA5 517 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 RPF1Q9H9Y2 349 aaKnown RBP11.98□□□□□ -0.49
TRIM41-209ENST00000515834 EIF2AK2P19525 551 aaKnown RBP11.98□□□□□ -0.49
TRIM41-209ENST00000515834 ASPRV1Q53RT3 343 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 PUS3Q9BZE2 481 aaKnown RBP11.98□□□□□ -0.49
TRIM41-209ENST00000515834 GNGT2O14610 69 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 PTGDRQ13258 359 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 PDCD6IPQ8WUM4 868 aaKnown RBP11.98□□□□□ -0.49
TRIM41-209ENST00000515834 MED23Q9ULK4 1368 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 RNF40O75150 1001 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 ZNF853P0CG23 659 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 PFKFB1P16118 471 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 RECQLP46063 649 aaPredicted RBP11.98□□□□□ -0.49
TRIM41-209ENST00000515834 ZNF75DP51815 510 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 SCN4BQ8IWT1 228 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 KCTD6Q8NC69 237 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 CABS1Q96KC9 395 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 RPGRIP1Q96KN7 1286 aa11.98□□□□□ -0.49
TRIM41-209ENST00000515834 MMP10P09238 476 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 TSNAXIP1Q2TAA8 658 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 EFCAB13Q8IY85 973 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 RTKN2Q8IZC4 609 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 EXT2Q93063 718 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 TRIM35Q9UPQ4 493 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 ZBTB1Q9Y2K1 713 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 GSTA4O15217 222 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 GADD45BO75293 160 aaPredicted RBP11.97□□□□□ -0.49
TRIM41-209ENST00000515834 PSAPP07602 524 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 INHBAP08476 426 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 PMLP29590 882 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 HOXA13P31271 388 aaPredicted RBP11.97□□□□□ -0.49
TRIM41-209ENST00000515834 ASPHQ12797 758 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 SYMPKQ92797 1274 aaKnown RBP11.97□□□□□ -0.49
TRIM41-209ENST00000515834 TMEM106CQ9BVX2 250 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 MRPL46Q9H2W6 279 aaKnown RBP11.97□□□□□ -0.49
TRIM41-209ENST00000515834 VCX3AQ9NNX9 186 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 SLC13A4Q9UKG4 626 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 A0A0D9SFI3 127 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 CHL1O00533 1208 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 TUBB2AQ13885 445 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 LRRC41Q15345 812 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 C8orf34Q49A92 452 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 CATSPER4Q7RTX7 472 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 THEM5Q8N1Q8 247 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 WHAMMQ8TF30 809 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 TUBB2BQ9BVA1 445 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 AOX1Q06278 1338 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 FGAP02671 866 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 DDIT3P35638 169 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 CDO1Q16878 200 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 MYO1FO00160 1098 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 SEC24BO95487 1268 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 CPP00450 1065 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 HOXD10P28358 340 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 BRD3Q15059 726 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 GPATCH4Q5T3I0 446 aaKnown RBP11.97□□□□□ -0.49
TRIM41-209ENST00000515834 BANK1Q8NDB2 785 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 OR6B3Q8NGW1 331 aa11.97□□□□□ -0.49
TRIM41-209ENST00000515834 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRIM41-209ENST00000515834 BBOX1O75936 387 aa11.96□□□□□ -0.49
TRIM41-209ENST00000515834 HSPD1P10809 573 aaKnown RBP11.96□□□□□ -0.49
TRIM41-209ENST00000515834 MAPK4P31152 587 aa11.96□□□□□ -0.49
TRIM41-209ENST00000515834 ARHGEF18Q6ZSZ5 1173 aa11.96□□□□□ -0.49
TRIM41-209ENST00000515834 RNF10Q8N5U6 811 aaKnown RBP11.96□□□□□ -0.49
TRIM41-209ENST00000515834 CALN1Q9BXU9 219 aa11.96□□□□□ -0.49
TRIM41-209ENST00000515834 PSDA5PKW4 1024 aaPredicted RBP11.96□□□□□ -0.49
TRIM41-209ENST00000515834 ME3Q16798 604 aa11.96□□□□□ -0.49
TRIM41-209ENST00000515834 DARS2Q6PI48 645 aaKnown RBP11.96□□□□□ -0.49
TRIM41-209ENST00000515834 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.96□□□□□ -0.49
TRIM41-209ENST00000515834 PIGSQ96S52 555 aa11.96□□□□□ -0.49
TRIM41-209ENST00000515834 TYW1Q9NV66 732 aaKnown RBP11.96□□□□□ -0.49
TRIM41-209ENST00000515834 SUCLA2Q9P2R7 463 aaPredicted RBP11.96□□□□□ -0.49
TRIM41-209ENST00000515834 MED7O43513 233 aa11.96□□□□□ -0.5
TRIM41-209ENST00000515834 MX2P20592 715 aa11.96□□□□□ -0.5
TRIM41-209ENST00000515834 UBE2SQ16763 222 aa11.96□□□□□ -0.5
TRIM41-209ENST00000515834 GALNT17Q6IS24 598 aa11.96□□□□□ -0.5
TRIM41-209ENST00000515834 KANSL2Q9H9L4 492 aa11.96□□□□□ -0.5
TRIM41-209ENST00000515834 SUGT1Q9Y2Z0 365 aa11.96□□□□□ -0.5
TRIM41-209ENST00000515834 BTBD18B2RXH4 712 aa11.96□□□□□ -0.5
TRIM41-209ENST00000515834 BPIFB4P59827 614 aa11.96□□□□□ -0.5
TRIM41-209ENST00000515834 CDHR1Q96JP9 859 aa11.96□□□□□ -0.5
TRIM41-209ENST00000515834 TACO1Q9BSH4 297 aaKnown RBP11.96□□□□□ -0.5
TRIM41-209ENST00000515834 DESI2Q9BSY9 194 aa11.96□□□□□ -0.5
TRIM41-209ENST00000515834 YEATS2Q9ULM3 1422 aa11.96□□□□□ -0.5
TRIM41-209ENST00000515834 ESRRBO95718 433 aa11.96□□□□□ -0.5
TRIM41-209ENST00000515834 SERPINB6P35237 376 aa11.96□□□□□ -0.5
TRIM41-209ENST00000515834 ACCSLQ4AC99 568 aa11.96□□□□□ -0.5
TRIM41-209ENST00000515834 C17orf53Q8N3J3 647 aaPredicted RBP11.96□□□□□ -0.5
TRIM41-209ENST00000515834 CFAP36Q96G28 342 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms