RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 HOOK2Q96ED9 719 aa17.31■□□□□ 0.36
THUMPD3-210ENST00000515662 SLF1Q9BQI6 1058 aa17.31■□□□□ 0.36
THUMPD3-210ENST00000515662 DICER1Q9UPY3 1922 aaKnown RBP17.31■□□□□ 0.36
THUMPD3-210ENST00000515662 MYMKA6NI61 221 aa17.31■□□□□ 0.36
THUMPD3-210ENST00000515662 ICAM1P05362 532 aa17.31■□□□□ 0.36
THUMPD3-210ENST00000515662 TPD52L1Q16890 204 aaPredicted RBP17.31■□□□□ 0.36
THUMPD3-210ENST00000515662 PRAMEF18Q5VWM3 479 aa17.31■□□□□ 0.36
THUMPD3-210ENST00000515662 EXOC1Q9NV70 894 aa17.31■□□□□ 0.36
THUMPD3-210ENST00000515662 ZNF536O15090 1300 aa17.31■□□□□ 0.36
THUMPD3-210ENST00000515662 KDM3AQ9Y4C1 1321 aa17.31■□□□□ 0.36
THUMPD3-210ENST00000515662 DOCK1Q14185 1865 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 A0A1B0GTH6 734 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 SLC26A4O43511 780 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 SKILP12757 684 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 CCT6AP40227 531 aaKnown RBP17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 SPIRE1Q08AE8 756 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 DGKZQ13574 1117 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 MTMR2Q13614 643 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 SCYL3Q8IZE3 742 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 AGBL1Q96MI9 1066 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 FAM20AQ96MK3 541 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 FHDC1Q9C0D6 1143 aaPredicted RBP17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 STAT3P40763 770 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 EPS15P42566 896 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 HIRAP54198 1017 aaPredicted RBP17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 PDE4DQ08499 809 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 STIM1Q13586 685 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 NR1I3Q14994 352 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 CNNM4Q6P4Q7 775 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 CYP2W1Q8TAV3 490 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 WDR18Q9BV38 432 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 GTPBP4Q9BZE4 634 aaKnown RBP17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 EMILIN3Q9NT22 766 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 GGA3Q9NZ52 723 aa17.3■□□□□ 0.36
THUMPD3-210ENST00000515662 ZNF76P36508 570 aa17.29■□□□□ 0.36
THUMPD3-210ENST00000515662 PTPN21Q16825 1174 aa17.29■□□□□ 0.36
THUMPD3-210ENST00000515662 WRNIP1Q96S55 665 aa17.29■□□□□ 0.36
THUMPD3-210ENST00000515662 ARID3AQ99856 593 aa17.29■□□□□ 0.36
THUMPD3-210ENST00000515662 LRRC27Q9C0I9 530 aa17.29■□□□□ 0.36
THUMPD3-210ENST00000515662 NT5C3AQ9H0P0 336 aa17.29■□□□□ 0.36
THUMPD3-210ENST00000515662 CCPG1Q9ULG6 757 aa17.29■□□□□ 0.36
THUMPD3-210ENST00000515662 PVALEFA0A1B0GWK0 134 aa17.29■□□□□ 0.36
THUMPD3-210ENST00000515662 MSH4O15457 936 aa17.29■□□□□ 0.36
THUMPD3-210ENST00000515662 VCAM1P19320 739 aa17.29■□□□□ 0.36
THUMPD3-210ENST00000515662 SFPQP23246 707 aaKnown RBP eCLIP17.29■□□□□ 0.36
THUMPD3-210ENST00000515662 STK4Q13043 487 aa17.29■□□□□ 0.36
THUMPD3-210ENST00000515662 ZKSCAN4Q969J2 545 aaPredicted RBP17.29■□□□□ 0.36
THUMPD3-210ENST00000515662 TANGO6Q9C0B7 1094 aa17.29■□□□□ 0.36
THUMPD3-210ENST00000515662 IGLV3-22A0A075B6J6 115 aa17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 PSMA7O14818 248 aa17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 USP14P54578 494 aa17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 SPP2Q13103 211 aa17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 UNC13DQ70J99 1090 aa17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 DHTKD1Q96HY7 919 aaPredicted RBP17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 CTAGE1Q96RT6 745 aa17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 PICK1Q9NRD5 415 aa17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 ADD3Q9UEY8 706 aaKnown RBP17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 PPP2R3BQ9Y5P8 575 aa17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 PTPRAP18433 802 aa17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 PMS1P54277 932 aaKnown RBP17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 TBX2Q13207 712 aaPredicted RBP17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 EHMT1Q9H9B1 1298 aa17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 SLC38A10Q9HBR0 1119 aa17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 LIMA1Q9UHB6 759 aaKnown RBP17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 VAV3Q9UKW4 847 aa17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 KIAA1024Q9UPX6 916 aa17.28■□□□□ 0.36
THUMPD3-210ENST00000515662 SBF1O95248 1867 aa17.27■□□□□ 0.36
THUMPD3-210ENST00000515662 POTEB3A0JP26 581 aa17.27■□□□□ 0.36
THUMPD3-210ENST00000515662 TRIM49BA6NDI0 452 aa17.27■□□□□ 0.36
THUMPD3-210ENST00000515662 POTECB2RU33 542 aa17.27■□□□□ 0.36
THUMPD3-210ENST00000515662 MED24O75448 989 aa17.27■□□□□ 0.36
THUMPD3-210ENST00000515662 FCER1AP12319 257 aa17.27■□□□□ 0.36
THUMPD3-210ENST00000515662 HSD17B4P51659 736 aa17.27■□□□□ 0.36
THUMPD3-210ENST00000515662 COBLL1Q53SF7 1204 aa17.27■□□□□ 0.36
THUMPD3-210ENST00000515662 SPECC1LQ69YQ0 1117 aa17.27■□□□□ 0.36
THUMPD3-210ENST00000515662 POTEBQ6S5H4 581 aa17.27■□□□□ 0.36
THUMPD3-210ENST00000515662 DYMQ7RTS9 669 aa17.27■□□□□ 0.36
THUMPD3-210ENST00000515662 RPAP3Q9H6T3 665 aaPredicted RBP17.27■□□□□ 0.36
THUMPD3-210ENST00000515662 PPP1R9AQ9ULJ8 1098 aa17.27■□□□□ 0.36
THUMPD3-210ENST00000515662 FZD1Q9UP38 647 aa17.27■□□□□ 0.36
THUMPD3-210ENST00000515662 LRRC10BA6NIK2 292 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 FLOT1O75955 427 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 BACE1P56817 501 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 SPAG1Q07617 926 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 DNTTIP2Q5QJE6 756 aaKnown RBP17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 HAUS3Q68CZ6 603 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 ERMNQ8TAM6 284 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 CLEC4DQ8WXI8 215 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 TSC1Q92574 1164 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 DDX12PQ92771 950 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 AS3MTQ9HBK9 375 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 SSC5DA1L4H1 1573 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 TEX33O43247 280 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 PPP1R2P41236 205 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 TERF1P54274 439 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 KRT31Q15323 416 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 TCP11X2Q5H9J9 407 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 NCAPH2Q6IBW4 605 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 TTI2Q6NXR4 508 aa17.26■□□□□ 0.35
THUMPD3-210ENST00000515662 KIAA0895Q8NCT3 520 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms