RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 INF2Q27J81 1249 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 CT47A1Q5JQC4 288 aaPredicted RBP11.2□□□□□ -0.62
TPM3-221ENST00000513769 KIAA1755Q5JYT7 1200 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 BLOC1S3Q6QNY0 202 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 ARMC9Q7Z3E5 817 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 ANKRD13AQ8IZ07 590 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 SPICE1Q8N0Z3 855 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 TBCKQ8TEA7 893 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 CCSER1Q9C0I3 900 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 EHMT1Q9H9B1 1298 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 GRPEL1Q9HAV7 217 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 TMOD4Q9NZQ9 345 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 CSADQ9Y600 493 aa11.2□□□□□ -0.62
TPM3-221ENST00000513769 SPDYE3A6NKU9 549 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 CCNT1O60563 726 aaKnown RBP11.19□□□□□ -0.62
TPM3-221ENST00000513769 MYL1P05976 194 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 CFHP08603 1231 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 PFKFB1P16118 471 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 ATP2B1P20020 1258 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 FECHP22830 423 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 CIITAP33076 1130 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 MCM7P33993 719 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 TXLNAP40222 546 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 FKBP1BP68106 108 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 JAKMIP3Q5VZ66 844 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 CATSPERGQ6ZRH7 1159 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.19□□□□□ -0.62
TPM3-221ENST00000513769 GAS2L3Q86XJ1 694 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 ERO1BQ86YB8 467 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 IQUBQ8NA54 791 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 ANP32BQ92688 251 aaKnown RBP11.19□□□□□ -0.62
TPM3-221ENST00000513769 ZKSCAN4Q969J2 545 aaPredicted RBP11.19□□□□□ -0.62
TPM3-221ENST00000513769 MBOAT7Q96N66 472 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 MTMR9Q96QG7 549 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 NUP88Q99567 741 aaPredicted RBP11.19□□□□□ -0.62
TPM3-221ENST00000513769 FUCA2Q9BTY2 467 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 CSRNP2Q9H175 543 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 CUEDC2Q9H467 287 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 SLC38A10Q9HBR0 1119 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 SCN4AP35499 1836 aa11.19□□□□□ -0.62
TPM3-221ENST00000513769 USP17L15C9J2P7 530 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 USP17L13C9JLJ4 530 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 USP17L11C9JVI0 530 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 USP17L18D6R9N7 530 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 USP17L22D6RA61 530 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 USP17L17D6RBQ6 530 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 USP17L19D6RCP7 530 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 USP17L20D6RJB6 530 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 GCOM1H8Y6P7 765 aaPredicted RBP11.18□□□□□ -0.62
TPM3-221ENST00000513769 FOXN1O15353 648 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 SLFN14P0C7P3 912 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 POLR2MP0CAP2 368 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 HOXA7P31268 230 aaPredicted RBP11.18□□□□□ -0.62
TPM3-221ENST00000513769 USP17L24Q0WX57 530 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 ZRSR1Q15695 479 aaKnown RBP11.18□□□□□ -0.62
TPM3-221ENST00000513769 LETM2Q2VYF4 491 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 TKFCQ3LXA3 575 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 KMT5BQ4FZB7 885 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 KRBA2Q6ZNG9 492 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 RASGRP2Q7LDG7 609 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 METTL3Q86U44 580 aaKnown RBP11.18□□□□□ -0.62
TPM3-221ENST00000513769 LDHDQ86WU2 507 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 SLFN12Q8IYM2 578 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 CNNM3Q8NE01 707 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 CRYGNQ8WXF5 182 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 KIFC2Q96AC6 838 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 FAM20AQ96MK3 541 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 CLIC6Q96NY7 704 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 GTPBP4Q9BZE4 634 aaKnown RBP11.18□□□□□ -0.62
TPM3-221ENST00000513769 PRKD2Q9BZL6 878 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 NAT10Q9H0A0 1025 aaKnown RBP11.18□□□□□ -0.62
TPM3-221ENST00000513769 GOLPH3LQ9H4A5 285 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 CCDC39Q9UFE4 941 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 PPP1R9AQ9ULJ8 1098 aa11.18□□□□□ -0.62
TPM3-221ENST00000513769 CTDP1Q9Y5B0 961 aaPredicted RBP11.18□□□□□ -0.62
TPM3-221ENST00000513769 NEMFO60524 1076 aa11.17□□□□□ -0.62
TPM3-221ENST00000513769 SLC10A3P09131 477 aa11.17□□□□□ -0.62
TPM3-221ENST00000513769 DEKP35659 375 aaKnown RBP11.17□□□□□ -0.62
TPM3-221ENST00000513769 UBA7P41226 1012 aa11.17□□□□□ -0.62
TPM3-221ENST00000513769 MDM2Q00987 491 aaPredicted RBP11.17□□□□□ -0.62
TPM3-221ENST00000513769 CAMK4Q16566 473 aa11.17□□□□□ -0.62
TPM3-221ENST00000513769 LONRF3Q496Y0 759 aa11.17□□□□□ -0.62
TPM3-221ENST00000513769 Q4G0T1 1027 aa11.17□□□□□ -0.62
TPM3-221ENST00000513769 EAPPQ56P03 285 aaPredicted RBP11.17□□□□□ -0.62
TPM3-221ENST00000513769 LDLRAD1Q5T700 205 aa11.17□□□□□ -0.62
TPM3-221ENST00000513769 NT5DC1Q5TFE4 455 aa11.17□□□□□ -0.62
TPM3-221ENST00000513769 PRAMEF18Q5VWM3 479 aa11.17□□□□□ -0.62
TPM3-221ENST00000513769 FASTKD5Q7L8L6 764 aaKnown RBP11.17□□□□□ -0.62
TPM3-221ENST00000513769 MB21D1Q8N884 522 aa11.17□□□□□ -0.62
TPM3-221ENST00000513769 TRIML1Q8N9V2 468 aa11.17□□□□□ -0.62
TPM3-221ENST00000513769 PROCA1Q8NCQ7 364 aaPredicted RBP11.17□□□□□ -0.62
TPM3-221ENST00000513769 GLIS2Q9BZE0 524 aaPredicted RBP11.17□□□□□ -0.62
TPM3-221ENST00000513769 PRDM10Q9NQV6 1147 aa11.17□□□□□ -0.62
TPM3-221ENST00000513769 ANO10Q9NW15 660 aa11.17□□□□□ -0.62
TPM3-221ENST00000513769 TUBE1Q9UJT0 475 aa11.17□□□□□ -0.62
TPM3-221ENST00000513769 SCAF8Q9UPN6 1271 aaKnown RBP11.17□□□□□ -0.62
TPM3-221ENST00000513769 POLR2AP24928 1970 aaKnown RBP11.17□□□□□ -0.62
TPM3-221ENST00000513769 VWA3AA6NCI4 1184 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 TMEM88BA6NKF7 163 aa11.16□□□□□ -0.62
TPM3-221ENST00000513769 VWA5AO00534 786 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms