RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 PABPC4Q13310 644 aaKnown RBP eCLIP8.48□□□□□ -1.05
CLCN3-209ENST00000513761 BEND6Q5SZJ8 279 aaPredicted RBP8.48□□□□□ -1.05
CLCN3-209ENST00000513761 CCDC62Q6P9F0 684 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 DYNLL2Q96FJ2 89 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 ELAC2Q9BQ52 826 aaKnown RBP8.48□□□□□ -1.05
CLCN3-209ENST00000513761 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.48□□□□□ -1.051e-6■■■□□ 15.4
CLCN3-209ENST00000513761 PSD3Q9NYI0 1048 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 HEG1Q9ULI3 1381 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 GFPT2O94808 682 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 ARL6IP4Q66PJ3 421 aaKnown RBP8.47□□□□□ -1.05
CLCN3-209ENST00000513761 TMTC3Q6ZXV5 915 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 APBB1IPQ7Z5R6 666 aaPredicted RBP8.47□□□□□ -1.05
CLCN3-209ENST00000513761 NLRP14Q86W24 1093 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 ENAHQ8N8S7 591 aaPredicted RBP8.47□□□□□ -1.05
CLCN3-209ENST00000513761 RAB3IPQ96QF0 476 aaPredicted RBP8.47□□□□□ -1.05
CLCN3-209ENST00000513761 FMO2Q99518 471 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 VCXQ9H320 206 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 SLC24A3Q9HC58 644 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 HDAC9Q9UKV0 1011 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 PALLDQ8WX93 1383 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 WDR19Q8NEZ3 1342 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 GNPATO15228 680 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 CLIC2O15247 247 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 CYP27B1O15528 508 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 LRRN2O75325 713 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 IFNB1P01574 187 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 MYL1P05976 194 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 USP17L8P0C7I0 530 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 PPP2R5EQ16537 467 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 CPVLQ9H3G5 476 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 AGPAT5Q9NUQ2 364 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 TMEM51Q9NW97 253 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 USP17L3A6NCW0 530 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 USP17L4A6NCW7 530 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 SASH3O75995 380 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 MAGOHP61326 146 aaKnown RBP8.47□□□□□ -1.05
CLCN3-209ENST00000513761 ANKRD20A3Q5VUR7 823 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 USP17L2Q6R6M4 530 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 USP17L1Q7RTZ2 530 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 MS4A14Q96JA4 679 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 CLUL1Q15846 466 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 TMC4Q7Z404 712 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 GDAP1Q8TB36 358 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 COA7Q96BR5 231 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 ATP8A2Q9NTI2 1148 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 TBK1Q9UHD2 729 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 HPS5Q9UPZ3 1129 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 INO80Q9ULG1 1556 aaPredicted RBP8.47□□□□□ -1.05
CLCN3-209ENST00000513761 CFBP00751 764 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 SNX1Q13596 522 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 NCAPHQ15003 741 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 HLFQ16534 295 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 FNBP1Q96RU3 617 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 PIGSQ96S52 555 aa8.47□□□□□ -1.05
CLCN3-209ENST00000513761 TARSL2A2RTX5 802 aaKnown RBP8.46□□□□□ -1.05
CLCN3-209ENST00000513761 PCP11498 1178 aaKnown RBP8.46□□□□□ -1.05
CLCN3-209ENST00000513761 TCP10Q12799 353 aa8.46□□□□□ -1.05
CLCN3-209ENST00000513761 WDR44Q5JSH3 913 aa8.46□□□□□ -1.05
CLCN3-209ENST00000513761 CCNI2Q6ZMN8 369 aaPredicted RBP8.46□□□□□ -1.05
CLCN3-209ENST00000513761 SGMS1Q86VZ5 419 aa8.46□□□□□ -1.05
CLCN3-209ENST00000513761 TAB3Q8N5C8 712 aaPredicted RBP8.46□□□□□ -1.05
CLCN3-209ENST00000513761 PBKQ96KB5 322 aa8.46□□□□□ -1.05
CLCN3-209ENST00000513761 RIC8AQ9NPQ8 531 aa8.46□□□□□ -1.05
CLCN3-209ENST00000513761 DNAJC17Q9NVM6 304 aaKnown RBP8.46□□□□□ -1.05
CLCN3-209ENST00000513761 RTCBQ9Y3I0 505 aaKnown RBP8.46□□□□□ -1.05
CLCN3-209ENST00000513761 A2ML1A8K2U0 1454 aa8.46□□□□□ -1.05
CLCN3-209ENST00000513761 CLGNO14967 610 aa8.46□□□□□ -1.05
CLCN3-209ENST00000513761 KRT14P02533 472 aa8.46□□□□□ -1.05
CLCN3-209ENST00000513761 TRAF1Q13077 416 aa8.46□□□□□ -1.05
CLCN3-209ENST00000513761 NGLY1Q96IV0 654 aa8.46□□□□□ -1.05
CLCN3-209ENST00000513761 BZW2Q9Y6E2 419 aaKnown RBP8.46□□□□□ -1.05
CLCN3-209ENST00000513761 CAMSAP1Q5T5Y3 1602 aa8.46□□□□□ -1.05
CLCN3-209ENST00000513761 PPRC1Q5VV67 1664 aaKnown RBP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 COL3A1P02461 1466 aaPredicted RBP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 MEIS1O00470 390 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 TXNDC9O14530 226 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 FGGP02679 453 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 RASSF2P50749 326 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 IRAK1P51617 712 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 ZYXQ15942 572 aaKnown RBP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 RABL6Q3YEC7 729 aaPredicted RBP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 ALKBH5Q6P6C2 394 aaKnown RBP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 LRRC31Q6UY01 552 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 NEK9Q8TD19 979 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 HPS3Q969F9 1004 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 DDX47Q9H0S4 455 aaKnown RBP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 TPX2Q9ULW0 747 aaKnown RBP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 CAPN11Q9UMQ6 739 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 GMNCA6NCL1 334 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 LRRIQ3A6PVS8 624 aaPredicted RBP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 AFPP02771 609 aaKnown RBP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 CYP2D6P10635 497 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 FCER1AP12319 257 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 GLE1Q53GS7 698 aaKnown RBP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 DPP8Q6V1X1 898 aaPredicted RBP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 VIPAS39Q9H9C1 493 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 LIMA1Q9UHB6 759 aaKnown RBP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 SNX12Q9UMY4 172 aa8.46□□□□□ -1.06
CLCN3-209ENST00000513761 EIF4E1BA6NMX2 242 aaKnown RBP8.46□□□□□ -1.06
CLCN3-209ENST00000513761 GSG1L2A8MUP6 293 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms