RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 PTCRAQ6ISU1 281 aaPredicted RBP16.4■□□□□ 0.22
SPCS3-204ENST00000513139 GDF6Q6KF10 455 aaPredicted RBP16.4■□□□□ 0.22
SPCS3-204ENST00000513139 TMCO2Q7Z6W1 182 aaPredicted RBP16.4■□□□□ 0.22
SPCS3-204ENST00000513139 MAF1Q9H063 256 aa16.4■□□□□ 0.22
SPCS3-204ENST00000513139 CTNNA3Q9UI47 895 aa16.4■□□□□ 0.22
SPCS3-204ENST00000513139 MTUS1Q9ULD2 1270 aa16.4■□□□□ 0.22
SPCS3-204ENST00000513139 MYO7AQ13402 2215 aa16.39■□□□□ 0.22
SPCS3-204ENST00000513139 NBNO60934 754 aa16.39■□□□□ 0.21
SPCS3-204ENST00000513139 CKBP12277 381 aa16.39■□□□□ 0.21
SPCS3-204ENST00000513139 SLC16A2P36021 539 aa16.39■□□□□ 0.21
SPCS3-204ENST00000513139 TTBK2Q6IQ55 1244 aa16.39■□□□□ 0.21
SPCS3-204ENST00000513139 CCDC62Q6P9F0 684 aa16.39■□□□□ 0.21
SPCS3-204ENST00000513139 DHX38Q92620 1227 aaKnown RBP16.39■□□□□ 0.21
SPCS3-204ENST00000513139 SEC62Q99442 399 aaKnown RBP16.39■□□□□ 0.21
SPCS3-204ENST00000513139 ANAPC4Q9UJX5 808 aa16.39■□□□□ 0.21
SPCS3-204ENST00000513139 INSL6Q9Y581 213 aa16.39■□□□□ 0.21
SPCS3-204ENST00000513139 RALGAPA2Q2PPJ7 1873 aa16.39■□□□□ 0.21
SPCS3-204ENST00000513139 WDR19Q8NEZ3 1342 aa16.39■□□□□ 0.21
SPCS3-204ENST00000513139 POTEB3A0JP26 581 aa16.38■□□□□ 0.21
SPCS3-204ENST00000513139 ARIH2O95376 493 aa16.38■□□□□ 0.21
SPCS3-204ENST00000513139 MMP3P08254 477 aa16.38■□□□□ 0.21
SPCS3-204ENST00000513139 IL9P15248 144 aa16.38■□□□□ 0.21
SPCS3-204ENST00000513139 CASTP20810 708 aaKnown RBP16.38■□□□□ 0.21
SPCS3-204ENST00000513139 ZMYM1Q5SVZ6 1142 aa16.38■□□□□ 0.21
SPCS3-204ENST00000513139 POTEBQ6S5H4 581 aa16.38■□□□□ 0.21
SPCS3-204ENST00000513139 RGS22Q8NE09 1264 aa16.38■□□□□ 0.21
SPCS3-204ENST00000513139 NEK9Q8TD19 979 aa16.38■□□□□ 0.21
SPCS3-204ENST00000513139 AFG1LQ8WV93 481 aa16.38■□□□□ 0.21
SPCS3-204ENST00000513139 MRPL38Q96DV4 380 aaKnown RBP16.38■□□□□ 0.21
SPCS3-204ENST00000513139 CRBNQ96SW2 442 aa16.38■□□□□ 0.21
SPCS3-204ENST00000513139 GTF2IRD1Q9UHL9 959 aa16.38■□□□□ 0.21
SPCS3-204ENST00000513139 MTMR7Q9Y216 660 aa16.38■□□□□ 0.21
SPCS3-204ENST00000513139 DCXO43602 365 aa16.37■□□□□ 0.21
SPCS3-204ENST00000513139 ORC4O43929 436 aa16.37■□□□□ 0.21
SPCS3-204ENST00000513139 RANBP6O60518 1105 aaKnown RBP16.37■□□□□ 0.21
SPCS3-204ENST00000513139 GH1P01241 217 aa16.37■□□□□ 0.21
SPCS3-204ENST00000513139 FGRP09769 529 aa16.37■□□□□ 0.21
SPCS3-204ENST00000513139 TOP1P11387 765 aaKnown RBP16.37■□□□□ 0.21
SPCS3-204ENST00000513139 CHMP4BP1P59074 171 aa16.37■□□□□ 0.21
SPCS3-204ENST00000513139 NHLH1Q02575 133 aa16.37■□□□□ 0.21
SPCS3-204ENST00000513139 CTDSPL2Q05D32 466 aa16.37■□□□□ 0.21
SPCS3-204ENST00000513139 FBXO22Q8NEZ5 403 aa16.37■□□□□ 0.21
SPCS3-204ENST00000513139 KAT2BQ92831 832 aa16.37■□□□□ 0.21
SPCS3-204ENST00000513139 UIMC1Q96RL1 719 aa16.37■□□□□ 0.21
SPCS3-204ENST00000513139 PRKAG3Q9UGI9 489 aa16.37■□□□□ 0.21
SPCS3-204ENST00000513139 FAM50BQ9Y247 325 aa16.37■□□□□ 0.21
SPCS3-204ENST00000513139 ARHGAP1Q07960 439 aa16.36■□□□□ 0.21
SPCS3-204ENST00000513139 PTK7Q13308 1070 aa16.36■□□□□ 0.21
SPCS3-204ENST00000513139 DGKDQ16760 1214 aa16.36■□□□□ 0.21
SPCS3-204ENST00000513139 PTPROQ16827 1216 aa16.36■□□□□ 0.21
SPCS3-204ENST00000513139 TCTN1Q2MV58 587 aa16.36■□□□□ 0.21
SPCS3-204ENST00000513139 TSHZ3Q63HK5 1081 aa16.36■□□□□ 0.21
SPCS3-204ENST00000513139 SAMD11Q96NU1 681 aa16.36■□□□□ 0.21
SPCS3-204ENST00000513139 KATNAL1Q9BW62 490 aa16.36■□□□□ 0.21
SPCS3-204ENST00000513139 INCENPQ9NQS7 918 aa16.36■□□□□ 0.21
SPCS3-204ENST00000513139 TCP11L1Q9NUJ3 509 aa16.36■□□□□ 0.21
SPCS3-204ENST00000513139 TTC41PQ6P2S7 1318 aa16.36■□□□□ 0.21
SPCS3-204ENST00000513139 ATG2AQ2TAZ0 1938 aa16.35■□□□□ 0.21
SPCS3-204ENST00000513139 FOXP2O15409 715 aa16.35■□□□□ 0.21
SPCS3-204ENST00000513139 HTRA4P83105 476 aaPredicted RBP16.35■□□□□ 0.21
SPCS3-204ENST00000513139 COL19A1Q14993 1142 aa16.35■□□□□ 0.21
SPCS3-204ENST00000513139 TIGD5Q53EQ6 642 aa16.35■□□□□ 0.21
SPCS3-204ENST00000513139 C7orf31Q8N865 590 aa16.35■□□□□ 0.21
SPCS3-204ENST00000513139 SP7Q8TDD2 431 aaPredicted RBP16.35■□□□□ 0.21
SPCS3-204ENST00000513139 EMID1Q96A84 441 aaPredicted RBP16.35■□□□□ 0.21
SPCS3-204ENST00000513139 TMEM47Q9BQJ4 181 aa16.35■□□□□ 0.21
SPCS3-204ENST00000513139 DCTPP1Q9H773 170 aa16.35■□□□□ 0.21
SPCS3-204ENST00000513139 GPCPD1Q9NPB8 672 aa16.35■□□□□ 0.21
SPCS3-204ENST00000513139 HDAC6Q9UBN7 1215 aa16.35■□□□□ 0.21
SPCS3-204ENST00000513139 EMSYQ7Z589 1322 aa16.35■□□□□ 0.21
SPCS3-204ENST00000513139 COL4A6Q14031 1691 aa16.34■□□□□ 0.21
SPCS3-204ENST00000513139 LGR5O75473 907 aa16.34■□□□□ 0.21
SPCS3-204ENST00000513139 PDHBP11177 359 aa16.34■□□□□ 0.21
SPCS3-204ENST00000513139 TRIM71Q2Q1W2 868 aaKnown RBP16.34■□□□□ 0.21
SPCS3-204ENST00000513139 TRAF7Q6Q0C0 670 aa16.34■□□□□ 0.21
SPCS3-204ENST00000513139 PABPC5Q96DU9 382 aaKnown RBP16.34■□□□□ 0.21
SPCS3-204ENST00000513139 FBXL18Q96ME1 805 aa16.34■□□□□ 0.21
SPCS3-204ENST00000513139 C17orf80Q9BSJ5 609 aa16.34■□□□□ 0.21
SPCS3-204ENST00000513139 FRMPD2Q68DX3 1309 aaPredicted RBP16.34■□□□□ 0.21
SPCS3-204ENST00000513139 C19orf67A6NJJ6 358 aa16.33■□□□□ 0.2
SPCS3-204ENST00000513139 AMHP03971 560 aa16.33■□□□□ 0.2
SPCS3-204ENST00000513139 ZP2Q05996 745 aa16.33■□□□□ 0.2
SPCS3-204ENST00000513139 ZNF543Q08ER8 600 aa16.33■□□□□ 0.2
SPCS3-204ENST00000513139 MBTPS1Q14703 1052 aa16.33■□□□□ 0.2
SPCS3-204ENST00000513139 LY6KQ17RY6 165 aa16.33■□□□□ 0.2
SPCS3-204ENST00000513139 ZNF618Q5T7W0 954 aa16.33■□□□□ 0.2
SPCS3-204ENST00000513139 FAM117BQ6P1L5 589 aa16.33■□□□□ 0.2
SPCS3-204ENST00000513139 NSUN6Q8TEA1 469 aaKnown RBP16.33■□□□□ 0.2
SPCS3-204ENST00000513139 TTC14Q96N46 770 aa16.33■□□□□ 0.2
SPCS3-204ENST00000513139 IWS1Q96ST2 819 aa16.33■□□□□ 0.2
SPCS3-204ENST00000513139 FSD1Q9BTV5 496 aa16.33■□□□□ 0.2
SPCS3-204ENST00000513139 UPF3BQ9BZI7 483 aaKnown RBP16.33■□□□□ 0.2
SPCS3-204ENST00000513139 USP34Q70CQ2 3546 aa16.32■□□□□ 0.2
SPCS3-204ENST00000513139 H3BNC9 293 aa16.32■□□□□ 0.2
SPCS3-204ENST00000513139 H3BQ06 376 aaPredicted RBP16.32■□□□□ 0.2
SPCS3-204ENST00000513139 HAS3O00219 553 aa16.32■□□□□ 0.2
SPCS3-204ENST00000513139 F2P00734 622 aa16.32■□□□□ 0.2
SPCS3-204ENST00000513139 SNHG28P0DPA3 235 aa16.32■□□□□ 0.2
SPCS3-204ENST00000513139 PSEN2P49810 448 aa16.32■□□□□ 0.2
SPCS3-204ENST00000513139 ALX1Q15699 326 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms