RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 EIF2AK2P19525 551 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 GTF2A2P52657 109 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 TWF2Q6IBS0 349 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 RNF180Q86T96 592 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 ARRDC4Q8NCT1 418 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 ASIC3Q9UHC3 531 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 AMFRQ9UKV5 643 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 A0A0G2JLW4 131 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 ARL4AP40617 200 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 EPHB1P54762 984 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 GPSM2P81274 684 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 TTBK2Q6IQ55 1244 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 ANKS4BQ8N8V4 417 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 OR6J1Q8NGC5 347 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 RUNDC3BQ96NL0 473 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 TRIM56Q9BRZ2 755 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 ELP3Q9H9T3 547 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 PPANQ9NQ55 473 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 ABCC4O15439 1325 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 PFKFB2O60825 505 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 MYL1P05976 194 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 ZNF18P17022 549 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 NSFP46459 744 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 MYL7Q01449 175 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 SETDB1Q15047 1291 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 MAPK6Q16659 721 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 RSBN1LQ6PCB5 846 aaPredicted RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 C10orf67Q8IYJ2 551 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 NME8Q8N427 588 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 PI4K2BQ8TCG2 481 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 LPAR1Q92633 364 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 TIGD1Q96MW7 591 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 RMDN3Q96TC7 470 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 BAG1Q99933 345 aaPredicted RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 SELENOSQ9BQE4 189 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 LSM14BQ9BX40 385 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 KCNK9Q9NPC2 374 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 MBD5Q9P267 1494 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 PRR36Q9H6K5 1346 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 STXBP3O00186 592 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 RARBP10826 455 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 RAD51Q06609 339 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 BFSP1Q12934 665 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 BZW1Q7L1Q6 419 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 PSPC1Q8WXF1 523 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 CCDC127Q96BQ5 260 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 FOXP1Q9H334 677 aaPredicted RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 DNAI1Q9UI46 699 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 STAG3L1P0CL83 205 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 ADORA1P30542 326 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 HSPA4P34932 840 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 PHBP35232 272 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 LMNB2Q03252 620 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 COG2Q14746 738 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 RPS6KA1Q15418 735 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 CCDC6Q16204 474 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 FYB2Q5VWT5 728 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 TRMT44Q8IYL2 757 aaKnown RBP4.63□□□□□ -1.67
VCAN-209ENST00000513016 ADARB2Q9NS39 739 aaKnown RBP4.63□□□□□ -1.67
VCAN-209ENST00000513016 SAMD15Q9P1V8 674 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 TTC37Q6PGP7 1564 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 MROH7-TTC4A0A0A0MT08 1334 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 CCL15-CCL14A0A0B4J2E2 113 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 PRAMEF22A3QJZ6 481 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 KCNQ2O43526 872 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 ZNF202O95125 648 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 MOCS3O95396 460 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 CCL15Q16663 113 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 PPM1KQ8N3J5 372 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 AGBL3Q8NEM8 1001 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 RAVER2Q9HCJ3 691 aaKnown RBP4.63□□□□□ -1.67
VCAN-209ENST00000513016 KIAA1024Q9UPX6 916 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 BZW2Q9Y6E2 419 aaKnown RBP4.63□□□□□ -1.67
VCAN-209ENST00000513016 NCOA3Q9Y6Q9 1424 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 HUS1O60921 280 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 ZNF189O75820 626 aaPredicted RBP4.63□□□□□ -1.67
VCAN-209ENST00000513016 COG7P83436 770 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 CYP4A11Q02928 519 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 LRMPQ12912 555 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 ADAM9Q13443 819 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 ZSCAN23Q3MJ62 389 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 PEX26Q7Z412 305 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 CDKL2Q92772 493 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 SECISBP2LQ93073 1101 aaKnown RBP4.63□□□□□ -1.67
VCAN-209ENST00000513016 PIGSQ96S52 555 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 ATP6V0A4Q9HBG4 840 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 SH3GLB2Q9NR46 395 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 POLR3EQ9NVU0 708 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 DPP7Q9UHL4 492 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 LCMT1Q9UIC8 334 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 ABCC3O15438 1527 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 SPATA31A5Q5VU36 1347 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 SPATA31A7Q8IWB4 1347 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 CYP27B1O15528 508 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 RLBP1P12271 317 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 TFAMQ00059 246 aaKnown RBP4.63□□□□□ -1.67
VCAN-209ENST00000513016 CCDC15Q0P6D6 951 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 PSMD2Q13200 908 aa4.63□□□□□ -1.67
VCAN-209ENST00000513016 MYSM1Q5VVJ2 828 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms